RNA–Protein interactions for RNA: YOR198C

BFR1, Transcript of Component of mRNP complexes associated with polyribosomes, yeast

Gene BFR1, Length 1,413 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BFR1	YOR198C	UBP5	P39944	805 aa		4.26	□□□□□ -1.73
BFR1	YOR198C	ORC3	P54790	616 aa		4.26	□□□□□ -1.73
BFR1	YOR198C	YLR257W	Q06146	321 aa	Known RBP	4.26	□□□□□ -1.73
BFR1	YOR198C	MSC6	Q08818	692 aa	Known RBP	4.26	□□□□□ -1.73
BFR1	YOR198C	OXR1	Q08952	273 aa		4.26	□□□□□ -1.73
BFR1	YOR198C	LPX1	Q12405	387 aa	Known RBP	4.26	□□□□□ -1.73
BFR1	YOR198C	WHI5	Q12416	295 aa		4.26	□□□□□ -1.73
BFR1	YOR198C	VMA4	P22203	233 aa	Known RBP	4.25	□□□□□ -1.73
BFR1	YOR198C	GTS1	P40956	396 aa		4.25	□□□□□ -1.73
BFR1	YOR198C	THI12	P42883	340 aa		4.25	□□□□□ -1.73
BFR1	YOR198C	THI5	P43534	340 aa		4.25	□□□□□ -1.73
BFR1	YOR198C	DAK2	P43550	591 aa		4.25	□□□□□ -1.73
BFR1	YOR198C	THI11	P47183	340 aa		4.25	□□□□□ -1.73
BFR1	YOR198C	RSA3	Q05942	220 aa	Known RBP	4.25	□□□□□ -1.73
BFR1	YOR198C	THI13	Q07748	340 aa		4.25	□□□□□ -1.73
BFR1	YOR198C	HRK1	Q08732	759 aa	Known RBP	4.25	□□□□□ -1.73
BFR1	YOR198C	YHL012W	P38709	493 aa		4.24	□□□□□ -1.73
BFR1	YOR198C	PEX28	P38848	579 aa		4.24	□□□□□ -1.73
BFR1	YOR198C	CDA2	Q06703	312 aa		4.24	□□□□□ -1.73
BFR1	YOR198C	LAP2	Q10740	671 aa		4.24	□□□□□ -1.73
BFR1	YOR198C	RET1	P22276	1149 aa	Known RBP	4.23	□□□□□ -1.73
BFR1	YOR198C	SEC20	P28791	383 aa		4.23	□□□□□ -1.73
BFR1	YOR198C	TSA1	P34760	196 aa	Known RBP	4.23	□□□□□ -1.73
BFR1	YOR198C	NMD3	P38861	518 aa	Known RBP	4.23	□□□□□ -1.73
BFR1	YOR198C	YPL109C	Q02981	657 aa		4.23	□□□□□ -1.73
BFR1	YOR198C	TOS4	Q06266	489 aa		4.23	□□□□□ -1.73
BFR1	YOR198C	FAA3	P39002	694 aa		4.22	□□□□□ -1.73
BFR1	YOR198C	YNR063W	P53749	607 aa		4.22	□□□□□ -1.73
BFR1	YOR198C	RKM2	Q03942	479 aa		4.22	□□□□□ -1.73
BFR1	YOR198C	SAM35	P14693	329 aa		4.21	□□□□□ -1.73
BFR1	YOR198C	SLD2	P34252	453 aa		4.21	□□□□□ -1.73
BFR1	YOR198C	YJL045W	P47052	634 aa		4.21	□□□□□ -1.73
BFR1	YOR198C	YGL140C	P53120	1219 aa		4.21	□□□□□ -1.73
BFR1	YOR198C	ADI1	Q03677	179 aa		4.21	□□□□□ -1.73
BFR1	YOR198C	SEC23	P15303	768 aa	Known RBP	4.21	□□□□□ -1.74
BFR1	YOR198C	RPT1	P33299	467 aa	Known RBP	4.21	□□□□□ -1.74
BFR1	YOR198C	MDL2	P33311	773 aa		4.21	□□□□□ -1.74
BFR1	YOR198C	ADD66	P36040	267 aa		4.21	□□□□□ -1.74
BFR1	YOR198C	RDH54	P38086	958 aa		4.21	□□□□□ -1.74
BFR1	YOR198C	SEN54	Q02825	467 aa	Predicted RBP	4.21	□□□□□ -1.74
BFR1	YOR198C	QNS1	P38795	714 aa	Known RBP	4.2	□□□□□ -1.74
BFR1	YOR198C	IPL1	P38991	367 aa		4.2	□□□□□ -1.74
BFR1	YOR198C	VPS53	P47061	822 aa		4.2	□□□□□ -1.74
BFR1	YOR198C	YDL177C	Q12257	170 aa		4.2	□□□□□ -1.74
BFR1	YOR198C	HXK1	P04806	485 aa	Known RBP	4.19	□□□□□ -1.74
BFR1	YOR198C	SRO9	P25567	434 aa	Known RBP	4.19	□□□□□ -1.74
BFR1	YOR198C	FOL2	P51601	243 aa	Known RBP	4.19	□□□□□ -1.74
BFR1	YOR198C	HEM13	P11353	328 aa	Known RBP	4.18	□□□□□ -1.74
BFR1	YOR198C	ETP1	P38748	585 aa	Known RBP	4.18	□□□□□ -1.74
BFR1	YOR198C	MRPL22	P53881	309 aa		4.18	□□□□□ -1.74
BFR1	YOR198C	EST2	Q06163	884 aa		4.18	□□□□□ -1.74
BFR1	YOR198C	PRP6	P19735	899 aa	Predicted RBP	4.17	□□□□□ -1.74
BFR1	YOR198C	AFG2	P32794	780 aa		4.17	□□□□□ -1.74
BFR1	YOR198C	AIM26	P32858	118 aa		4.17	□□□□□ -1.74
BFR1	YOR198C	YKL222C	P35995	705 aa		4.17	□□□□□ -1.74
BFR1	YOR198C	PIC2	P40035	300 aa		4.17	□□□□□ -1.74
BFR1	YOR198C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	RIP-Chip
BFR1	YOR198C	COQ4	O13525	335 aa		4.16	□□□□□ -1.74
BFR1	YOR198C	DED1	P06634	604 aa	Known RBP	4.16	□□□□□ -1.74
BFR1	YOR198C	TAF13	P11747	167 aa		4.16	□□□□□ -1.74
BFR1	YOR198C	YCR015C	P25616	317 aa		4.16	□□□□□ -1.74
BFR1	YOR198C	HEM3	P28789	327 aa		4.16	□□□□□ -1.74
BFR1	YOR198C	YSC84	P32793	468 aa		4.16	□□□□□ -1.74
BFR1	YOR198C	AIM3	P38266	947 aa	Known RBP	4.16	□□□□□ -1.74
BFR1	YOR198C	YGR122W	P53272	402 aa		4.16	□□□□□ -1.74
BFR1	YOR198C	ESC8	Q08119	714 aa		4.16	□□□□□ -1.74
BFR1	YOR198C	NBA1	Q08229	501 aa	Known RBP	4.16	□□□□□ -1.74
BFR1	YOR198C	MCD1	Q12158	566 aa		4.16	□□□□□ -1.74
BFR1	YOR198C	THI80	P35202	319 aa		4.15	□□□□□ -1.74
BFR1	YOR198C	RIM8	P53179	542 aa		4.15	□□□□□ -1.74
BFR1	YOR198C	SNO2	P53823	222 aa		4.15	□□□□□ -1.74
BFR1	YOR198C	RSC58	Q07979	502 aa		4.15	□□□□□ -1.74
BFR1	YOR198C	PRE9	P23638	258 aa	Known RBP	4.14	□□□□□ -1.75
BFR1	YOR198C	KIP1	P28742	1111 aa		4.14	□□□□□ -1.75
BFR1	YOR198C	ALG3	P38179	458 aa		4.14	□□□□□ -1.75
BFR1	YOR198C	CCZ1	P38273	704 aa		4.14	□□□□□ -1.75
BFR1	YOR198C	GPB2	P39717	880 aa		4.14	□□□□□ -1.75
BFR1	YOR198C	GIS1	Q03833	894 aa		4.14	□□□□□ -1.75
BFR1	YOR198C	PTC5	Q12511	572 aa		4.14	□□□□□ -1.75
BFR1	YOR198C	SPS1	P08458	490 aa		4.13	□□□□□ -1.75
BFR1	YOR198C	MRPS18	P42847	217 aa		4.13	□□□□□ -1.75
BFR1	YOR198C	ENV11	P53246	860 aa		4.13	□□□□□ -1.75
BFR1	YOR198C	TNA1	P53322	534 aa		4.13	□□□□□ -1.75
BFR1	YOR198C	HDA2	Q06629	674 aa		4.13	□□□□□ -1.75
BFR1	YOR198C	FLR1	P38124	548 aa		4.12	□□□□□ -1.75
BFR1	YOR198C	GIP4	P39732	760 aa		4.12	□□□□□ -1.75
BFR1	YOR198C	TAF1	P46677	1066 aa		4.12	□□□□□ -1.75
BFR1	YOR198C	ENT3	P47160	408 aa		4.12	□□□□□ -1.75
BFR1	YOR198C	ROD1	Q02805	837 aa		4.12	□□□□□ -1.75
BFR1	YOR198C	SOD2	P00447	233 aa		4.12	□□□□□ -1.75
BFR1	YOR198C	RAD2	P07276	1031 aa		4.12	□□□□□ -1.75
BFR1	YOR198C	SNU71	P53207	620 aa	Known RBP	4.12	□□□□□ -1.75
BFR1	YOR198C	SIW14	P53965	281 aa		4.12	□□□□□ -1.75
BFR1	YOR198C	HOS3	Q02959	697 aa	Known RBP	4.12	□□□□□ -1.75
BFR1	YOR198C	RCL1	Q08096	367 aa	Predicted RBP	4.12	□□□□□ -1.75
BFR1	YOR198C	YPL260W	Q08977	551 aa		4.12	□□□□□ -1.75
BFR1	YOR198C	SPO21	Q12411	609 aa		4.12	□□□□□ -1.75
BFR1	YOR198C	RPS13	P05756	151 aa	Known RBP	4.11	□□□□□ -1.75
BFR1	YOR198C	CYC8	P14922	966 aa		4.11	□□□□□ -1.75
BFR1	YOR198C	BAP2	P38084	609 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms