RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeastyeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCL1YOL010W RRM3P38766 723 aa6.4□□□□□ -1.38
RCL1YOL010W MTO1P53070 669 aa6.4□□□□□ -1.38
RCL1YOL010W YGR117CP53270 476 aa6.4□□□□□ -1.38
RCL1YOL010W SEC3P33332 1336 aaKnown RBP6.4□□□□□ -1.39
RCL1YOL010W NUP145P49687 1317 aa6.4□□□□□ -1.39
RCL1YOL010W SAC7P17121 654 aa6.39□□□□□ -1.39
RCL1YOL010W VPS4P52917 437 aa6.39□□□□□ -1.39
RCL1YOL010W FBP1P09201 348 aa6.38□□□□□ -1.39
RCL1YOL010W HPR1P17629 752 aaKnown RBP6.38□□□□□ -1.39
RCL1YOL010W APE3P37302 537 aaKnown RBP6.38□□□□□ -1.39
RCL1YOL010W NCL1P38205 684 aaKnown RBP6.38□□□□□ -1.39
RCL1YOL010W RMT2Q03305 412 aa6.38□□□□□ -1.39
RCL1YOL010W DIB1Q06819 143 aaPredicted RBP6.38□□□□□ -1.39
RCL1YOL010W NAB2P32505 525 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
RCL1YOL010W PNT1P38969 423 aa6.37□□□□□ -1.39
RCL1YOL010W YFR016CP43597 1233 aaKnown RBP6.37□□□□□ -1.39
RCL1YOL010W ARI1P53111 347 aaKnown RBP6.37□□□□□ -1.39
RCL1YOL010W HSP104P31539 908 aaKnown RBP6.36□□□□□ -1.39
RCL1YOL010W COQ2P32378 372 aa6.36□□□□□ -1.39
RCL1YOL010W YKR073CP36153 106 aa6.36□□□□□ -1.39
RCL1YOL010W RPN1P38764 993 aaKnown RBP6.36□□□□□ -1.39
RCL1YOL010W RRT6P53117 311 aaPredicted RBP6.36□□□□□ -1.39
RCL1YOL010W YGL082WP53155 381 aa6.36□□□□□ -1.39
RCL1YOL010W MDG1P53885 366 aa6.36□□□□□ -1.39
RCL1YOL010W AUS1Q08409 1394 aa6.35□□□□□ -1.39
RCL1YOL010W TRP3P00937 484 aa6.35□□□□□ -1.39
RCL1YOL010W STV1P37296 890 aa6.35□□□□□ -1.39
RCL1YOL010W MED7Q08278 222 aa6.35□□□□□ -1.39
RCL1YOL010W TAO3P40468 2376 aa6.34□□□□□ -1.39
RCL1YOL010W YMR084WA2P2R3 262 aa6.34□□□□□ -1.39
RCL1YOL010W SKP1P52286 194 aa6.34□□□□□ -1.39
RCL1YOL010W UBP16Q02863 499 aa6.34□□□□□ -1.39
RCL1YOL010W CYT1P07143 309 aa6.33□□□□□ -1.4
RCL1YOL010W FRD1P32614 470 aaKnown RBP6.33□□□□□ -1.4
RCL1YOL010W GRX4P32642 244 aa6.33□□□□□ -1.4
RCL1YOL010W LIP5P32875 414 aa6.33□□□□□ -1.4
RCL1YOL010W KAE1P36132 386 aa6.33□□□□□ -1.4
RCL1YOL010W CUS1Q02554 436 aaPredicted RBP6.33□□□□□ -1.4
RCL1YOL010W SFA1P32771 386 aa6.32□□□□□ -1.4
RCL1YOL010W RBA50Q04418 439 aa6.32□□□□□ -1.4
RCL1YOL010W SGD1Q06132 899 aa6.32□□□□□ -1.4
RCL1YOL010W PAH1P32567 862 aa6.31□□□□□ -1.4
RCL1YOL010W YNR040WP53736 256 aa6.31□□□□□ -1.4
RCL1YOL010W HIM1Q06674 414 aa6.31□□□□□ -1.4
RCL1YOL010W YLR122CQ12312 125 aa6.31□□□□□ -1.4
RCL1YOL010W TSC13Q99190 310 aa6.31□□□□□ -1.4
RCL1YOL010W AFG2P32794 780 aa6.3□□□□□ -1.4
RCL1YOL010W ORC1P54784 914 aaPredicted RBP6.3□□□□□ -1.4
RCL1YOL010W CRF1Q04930 467 aa6.3□□□□□ -1.4
RCL1YOL010W GSC2P40989 1895 aa6.3□□□□□ -1.4
RCL1YOL010W LYS2P07702 1392 aa6.3□□□□□ -1.4
RCL1YOL010W HKR1P41809 1802 aa6.29□□□□□ -1.4
RCL1YOL010W CTF4Q01454 927 aa6.29□□□□□ -1.4
RCL1YOL010W EAR1Q03212 550 aa6.29□□□□□ -1.4
RCL1YOL010W SYF1Q04048 859 aaPredicted RBP6.29□□□□□ -1.4
RCL1YOL010W TAP42Q04372 366 aa6.29□□□□□ -1.4
RCL1YOL010W MRP10O75012 95 aa6.28□□□□□ -1.4
RCL1YOL010W APM2P38700 605 aa6.28□□□□□ -1.4
RCL1YOL010W DSD1P53095 428 aa6.28□□□□□ -1.4
RCL1YOL010W ALE1Q08548 619 aa6.28□□□□□ -1.4
RCL1YOL010W RRG1Q12167 365 aaPredicted RBP6.28□□□□□ -1.4
RCL1YOL010W CBP1P07252 654 aa6.27□□□□□ -1.41
RCL1YOL010W KAP122P32767 1081 aa6.27□□□□□ -1.41
RCL1YOL010W ULP1Q02724 621 aa6.27□□□□□ -1.41
RCL1YOL010W SEN54Q02825 467 aaPredicted RBP6.27□□□□□ -1.41
RCL1YOL010W YLR225CQ05948 407 aaKnown RBP6.27□□□□□ -1.41
RCL1YOL010W UTP4Q06679 776 aaKnown RBP6.27□□□□□ -1.41
RCL1YOL010W SCT1P32784 759 aa6.26□□□□□ -1.41
RCL1YOL010W AOS1Q06624 347 aa6.26□□□□□ -1.41
RCL1YOL010W SSP2Q08646 371 aa6.26□□□□□ -1.41
RCL1YOL010W ENO1P00924 437 aaKnown RBP6.25□□□□□ -1.41
RCL1YOL010W RSC6P25632 483 aa6.25□□□□□ -1.41
RCL1YOL010W YJL007CP47080 104 aa6.25□□□□□ -1.41
RCL1YOL010W MRX10Q05648 414 aa6.25□□□□□ -1.41
RCL1YOL010W KCC4P25389 1037 aa6.24□□□□□ -1.41
RCL1YOL010W PUB1P32588 453 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
RCL1YOL010W NGR1P32831 672 aaKnown RBP6.24□□□□□ -1.41
RCL1YOL010W YGR130CP53278 816 aa6.24□□□□□ -1.41
RCL1YOL010W IDI1P15496 288 aa6.23□□□□□ -1.41
RCL1YOL010W SCD5P34758 872 aa6.23□□□□□ -1.41
RCL1YOL010W PSF2P40359 213 aa6.23□□□□□ -1.41
RCL1YOL010W BRE4Q07660 1125 aa6.23□□□□□ -1.41
RCL1YOL010W HAT1Q12341 374 aa6.23□□□□□ -1.41
RCL1YOL010W MLP1Q02455 1875 aaKnown RBP6.23□□□□□ -1.41
RCL1YOL010W RPC31P17890 251 aa6.22□□□□□ -1.41
RCL1YOL010W SAF1P38352 637 aa6.22□□□□□ -1.41
RCL1YOL010W SSK22P25390 1331 aaPredicted RBP6.22□□□□□ -1.41
RCL1YOL010W CHS2P14180 963 aa6.21□□□□□ -1.42
RCL1YOL010W ELM1P32801 640 aa6.21□□□□□ -1.42
RCL1YOL010W LDH1P38139 375 aa6.21□□□□□ -1.42
RCL1YOL010W HXT5P38695 592 aa6.21□□□□□ -1.42
RCL1YOL010W TED1P40533 473 aa6.21□□□□□ -1.42
RCL1YOL010W VPS62P53285 467 aa6.21□□□□□ -1.42
RCL1YOL010W SLP1Q12232 587 aa6.21□□□□□ -1.42
RCL1YOL010W FLO11P08640 1367 aa6.2□□□□□ -1.42
RCL1YOL010W AKR1P39010 764 aa6.2□□□□□ -1.42
RCL1YOL010W FIR1P40020 876 aa6.2□□□□□ -1.42
RCL1YOL010W GSM1P42950 618 aa6.2□□□□□ -1.42
RCL1YOL010W TY1A-NL1Q12391 440 aaKnown RBP6.2□□□□□ -1.42
RCL1YOL010W TY4B-PA0A0B7P3V8 1104 aa6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms