RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C RTT10Q08924 1013 aa3.86□□□□□ -1.79
RPB11YOL005C ARI1P53111 347 aaKnown RBP3.85□□□□□ -1.79
RPB11YOL005C VPS16Q03308 798 aa3.85□□□□□ -1.79
RPB11YOL005C GLT1Q12680 2145 aaKnown RBP3.85□□□□□ -1.79
RPB11YOL005C CDC34P14682 295 aa3.84□□□□□ -1.79
RPB11YOL005C PRI2P20457 528 aa3.84□□□□□ -1.79
RPB11YOL005C NFS1P25374 497 aa3.84□□□□□ -1.79
RPB11YOL005C RDH54P38086 958 aa3.84□□□□□ -1.79
RPB11YOL005C SKN7P38889 622 aa3.84□□□□□ -1.79
RPB11YOL005C FAA4P47912 694 aaKnown RBP3.84□□□□□ -1.79
RPB11YOL005C SIW14P53965 281 aa3.84□□□□□ -1.79
RPB11YOL005C RAT1Q02792 1006 aaKnown RBP3.84□□□□□ -1.79
RPB11YOL005C YPL034WQ03083 165 aa3.84□□□□□ -1.79
RPB11YOL005C PIN2Q12057 282 aa3.84□□□□□ -1.79
RPB11YOL005C PTC5Q12511 572 aa3.84□□□□□ -1.79
RPB11YOL005C TAF13P11747 167 aa3.83□□□□□ -1.8
RPB11YOL005C MCM7P38132 845 aa3.83□□□□□ -1.8
RPB11YOL005C MSH4P40965 878 aaPredicted RBP3.83□□□□□ -1.8
RPB11YOL005C MAG2Q06436 670 aaKnown RBP3.83□□□□□ -1.8
RPB11YOL005C TMA46Q12000 345 aaKnown RBP3.83□□□□□ -1.8
RPB11YOL005C FAL1Q12099 399 aaKnown RBP3.83□□□□□ -1.8
RPB11YOL005C RPS4AP0CX35 261 aaKnown RBP3.82□□□□□ -1.8
RPB11YOL005C RPS4BP0CX36 261 aaKnown RBP3.82□□□□□ -1.8
RPB11YOL005C CHS2P14180 963 aa3.82□□□□□ -1.8
RPB11YOL005C RET1P22276 1149 aaKnown RBP3.82□□□□□ -1.8
RPB11YOL005C SYP1P25623 870 aaKnown RBP3.82□□□□□ -1.8
RPB11YOL005C MKK2P32491 506 aa3.82□□□□□ -1.8
RPB11YOL005C SMY2P32909 740 aaKnown RBP3.82□□□□□ -1.8
RPB11YOL005C WHI3P34761 661 aaKnown RBP3.82□□□□□ -1.8
RPB11YOL005C MOT2P34909 587 aaKnown RBP3.82□□□□□ -1.8
RPB11YOL005C NNK1P36003 928 aa3.82□□□□□ -1.8
RPB11YOL005C ALG3P38179 458 aa3.82□□□□□ -1.8
RPB11YOL005C SAF1P38352 637 aa3.82□□□□□ -1.8
RPB11YOL005C MMM1P41800 426 aa3.82□□□□□ -1.8
RPB11YOL005C LSB3P43603 459 aaKnown RBP3.82□□□□□ -1.8
RPB11YOL005C TPP1Q03796 238 aa3.82□□□□□ -1.8
RPB11YOL005C YLR257WQ06146 321 aaKnown RBP3.82□□□□□ -1.8
RPB11YOL005C WRS1Q12109 432 aaKnown RBP3.82□□□□□ -1.8
RPB11YOL005C TRP2P00899 507 aaKnown RBP3.81□□□□□ -1.8
RPB11YOL005C SBP1P10080 294 aaKnown RBP3.81□□□□□ -1.8
RPB11YOL005C BAS1P22035 811 aa3.81□□□□□ -1.8
RPB11YOL005C RER2P35196 286 aa3.81□□□□□ -1.8
RPB11YOL005C GPB2P39717 880 aa3.81□□□□□ -1.8
RPB11YOL005C GNP1P48813 663 aa3.81□□□□□ -1.8
RPB11YOL005C TYW3P53177 273 aa3.81□□□□□ -1.8
RPB11YOL005C YGR130CP53278 816 aa3.81□□□□□ -1.8
RPB11YOL005C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
RPB11YOL005C RKM2Q03942 479 aa3.81□□□□□ -1.8
RPB11YOL005C SPO20Q04359 397 aa3.81□□□□□ -1.8
RPB11YOL005C RSA3Q05942 220 aaKnown RBP3.81□□□□□ -1.8
RPB11YOL005C PUF3Q07807 879 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
RPB11YOL005C DUT1P33317 147 aa3.8□□□□□ -1.8
RPB11YOL005C KAE1P36132 386 aa3.8□□□□□ -1.8
RPB11YOL005C QNS1P38795 714 aaKnown RBP3.8□□□□□ -1.8
RPB11YOL005C HXT13P39924 564 aa3.8□□□□□ -1.8
RPB11YOL005C VPS53P47061 822 aa3.8□□□□□ -1.8
RPB11YOL005C CCT8P47079 568 aaKnown RBP3.8□□□□□ -1.8
RPB11YOL005C HXT17P53631 564 aa3.8□□□□□ -1.8
RPB11YOL005C HXT15P54854 567 aa3.8□□□□□ -1.8
RPB11YOL005C EEB1Q02891 456 aa3.8□□□□□ -1.8
RPB11YOL005C EAR1Q03212 550 aa3.8□□□□□ -1.8
RPB11YOL005C AOS1Q06624 347 aa3.8□□□□□ -1.8
RPB11YOL005C HRK1Q08732 759 aaKnown RBP3.8□□□□□ -1.8
RPB11YOL005C INO1P11986 533 aa3.79□□□□□ -1.8
RPB11YOL005C PUF4P25339 888 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
RPB11YOL005C MLS1P30952 554 aa3.79□□□□□ -1.8
RPB11YOL005C LYP1P32487 611 aa3.79□□□□□ -1.8
RPB11YOL005C AFG2P32794 780 aa3.79□□□□□ -1.8
RPB11YOL005C CNN1P43618 361 aa3.79□□□□□ -1.8
RPB11YOL005C CIT3P43635 486 aa3.79□□□□□ -1.8
RPB11YOL005C YJL045WP47052 634 aa3.79□□□□□ -1.8
RPB11YOL005C ALT1P52893 592 aa3.79□□□□□ -1.8
RPB11YOL005C MTC5Q03897 1148 aa3.79□□□□□ -1.8
RPB11YOL005C TIF35Q04067 274 aaKnown RBP3.79□□□□□ -1.8
RPB11YOL005C YLR225CQ05948 407 aaKnown RBP3.79□□□□□ -1.8
RPB11YOL005C PUS7Q08647 676 aaKnown RBP3.79□□□□□ -1.8
RPB11YOL005C YLR122CQ12312 125 aa3.79□□□□□ -1.8
RPB11YOL005C NSI1Q12457 570 aa3.79□□□□□ -1.8
RPB11YOL005C DBP5P20449 482 aaKnown RBP3.78□□□□□ -1.8
RPB11YOL005C KIP1P28742 1111 aa3.78□□□□□ -1.8
RPB11YOL005C ABD1P32783 436 aaPredicted RBP3.78□□□□□ -1.8
RPB11YOL005C ENT3P47160 408 aa3.78□□□□□ -1.8
RPB11YOL005C YGR053CP53234 283 aa3.78□□□□□ -1.8
RPB11YOL005C RCM1P53972 490 aa3.78□□□□□ -1.8
RPB11YOL005C ESC2Q06340 456 aa3.78□□□□□ -1.8
RPB11YOL005C OPI10Q08202 246 aa3.78□□□□□ -1.8
RPB11YOL005C SPO21Q12411 609 aa3.78□□□□□ -1.8
RPB11YOL005C YKL107WP34251 309 aa3.77□□□□□ -1.81
RPB11YOL005C YGL176CP46945 554 aa3.77□□□□□ -1.81
RPB11YOL005C TDA5Q06417 326 aaKnown RBP3.77□□□□□ -1.81
RPB11YOL005C CYC7P00045 113 aa3.76□□□□□ -1.81
RPB11YOL005C MSB1P21339 1137 aaKnown RBP3.76□□□□□ -1.81
RPB11YOL005C PGM1P33401 570 aaKnown RBP3.76□□□□□ -1.81
RPB11YOL005C YKL069WP36088 180 aa3.76□□□□□ -1.81
RPB11YOL005C RGD1P38339 666 aa3.76□□□□□ -1.81
RPB11YOL005C YHL012WP38709 493 aa3.76□□□□□ -1.81
RPB11YOL005C KRI1P42846 591 aaKnown RBP3.76□□□□□ -1.81
RPB11YOL005C HNT2P49775 206 aa3.76□□□□□ -1.81
RPB11YOL005C ALO1P54783 526 aaKnown RBP3.76□□□□□ -1.81
RPB11YOL005C YOR059CQ08448 450 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms