RNA–Protein interactions for RNA: YNL030W

HHF2, Transcript of Histone H4, yeast

Gene HHF2, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHF2	YNL030W	DED1	P06634	604 aa	Known RBP	4.14	□□□□□ -1.75
HHF2	YNL030W	GCR1	P07261	785 aa		4.14	□□□□□ -1.75
HHF2	YNL030W	SEC23	P15303	768 aa	Known RBP	4.14	□□□□□ -1.75
HHF2	YNL030W	TSR4	P25040	408 aa		4.14	□□□□□ -1.75
HHF2	YNL030W	RDH54	P38086	958 aa		4.14	□□□□□ -1.75
HHF2	YNL030W	SHU2	P38957	223 aa		4.14	□□□□□ -1.75
HHF2	YNL030W	YGR045C	P53229	120 aa		4.14	□□□□□ -1.75
HHF2	YNL030W	MTC5	Q03897	1148 aa		4.14	□□□□□ -1.75
HHF2	YNL030W	ESF1	Q06344	628 aa	Known RBP	4.14	□□□□□ -1.75
HHF2	YNL030W	YOR223W	Q12015	292 aa		4.14	□□□□□ -1.75
HHF2	YNL030W	MCD1	Q12158	566 aa		4.14	□□□□□ -1.75
HHF2	YNL030W	YKL091C	P33324	310 aa	Known RBP	4.13	□□□□□ -1.75
HHF2	YNL030W	PGM1	P33401	570 aa	Known RBP	4.13	□□□□□ -1.75
HHF2	YNL030W	NMD3	P38861	518 aa	Known RBP	4.13	□□□□□ -1.75
HHF2	YNL030W	HDA2	Q06629	674 aa		4.13	□□□□□ -1.75
HHF2	YNL030W	UBX5	Q06682	500 aa		4.13	□□□□□ -1.75
HHF2	YNL030W	MRL1	Q06815	381 aa		4.13	□□□□□ -1.75
HHF2	YNL030W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
HHF2	YNL030W	VMA4	P22203	233 aa	Known RBP	4.12	□□□□□ -1.75
HHF2	YNL030W	MTR4	P47047	1073 aa	Known RBP	4.12	□□□□□ -1.75
HHF2	YNL030W	GNP1	P48813	663 aa		4.12	□□□□□ -1.75
HHF2	YNL030W	ROD1	Q02805	837 aa		4.12	□□□□□ -1.75
HHF2	YNL030W	EAR1	Q03212	550 aa		4.12	□□□□□ -1.75
HHF2	YNL030W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
HHF2	YNL030W	MAD1	P40957	749 aa		4.11	□□□□□ -1.75
HHF2	YNL030W	MSH4	P40965	878 aa	Predicted RBP	4.11	□□□□□ -1.75
HHF2	YNL030W	POB3	Q04636	552 aa	Known RBP	4.11	□□□□□ -1.75
HHF2	YNL030W	AVO1	Q08236	1176 aa		4.11	□□□□□ -1.75
HHF2	YNL030W	YLL054C	Q12244	843 aa		4.11	□□□□□ -1.75
HHF2	YNL030W	YLR122C	Q12312	125 aa		4.11	□□□□□ -1.75
HHF2	YNL030W	COQ2	P32378	372 aa		4.1	□□□□□ -1.75
HHF2	YNL030W	AFG2	P32794	780 aa		4.1	□□□□□ -1.75
HHF2	YNL030W	PET112	P33893	541 aa		4.1	□□□□□ -1.75
HHF2	YNL030W	WHI3	P34761	661 aa	Known RBP	4.1	□□□□□ -1.75
HHF2	YNL030W	YAR028W	P39548	234 aa		4.1	□□□□□ -1.75
HHF2	YNL030W	HXT13	P39924	564 aa		4.1	□□□□□ -1.75
HHF2	YNL030W	VAC8	P39968	578 aa		4.1	□□□□□ -1.75
HHF2	YNL030W	HXT17	P53631	564 aa		4.1	□□□□□ -1.75
HHF2	YNL030W	HXT15	P54854	567 aa		4.1	□□□□□ -1.75
HHF2	YNL030W	RAT1	Q02792	1006 aa	Known RBP	4.1	□□□□□ -1.75
HHF2	YNL030W	GIC2	Q06648	383 aa		4.1	□□□□□ -1.75
HHF2	YNL030W	WRS1	Q12109	432 aa	Known RBP	4.1	□□□□□ -1.75
HHF2	YNL030W	GIN4	Q12263	1142 aa		4.1	□□□□□ -1.75
HHF2	YNL030W	YOR131C	Q12486	218 aa		4.1	□□□□□ -1.75
HHF2	YNL030W	GLT1	Q12680	2145 aa	Known RBP	4.1	□□□□□ -1.75
HHF2	YNL030W	SSB1	P11484	613 aa	Known RBP	4.09	□□□□□ -1.75
HHF2	YNL030W	DUT1	P33317	147 aa		4.09	□□□□□ -1.75
HHF2	YNL030W	ADD66	P36040	267 aa		4.09	□□□□□ -1.75
HHF2	YNL030W	ARL1	P38116	183 aa	Known RBP	4.09	□□□□□ -1.75
HHF2	YNL030W	SAF1	P38352	637 aa		4.09	□□□□□ -1.75
HHF2	YNL030W	SSB2	P40150	613 aa	Known RBP	4.09	□□□□□ -1.75
HHF2	YNL030W	NOP2	P40991	618 aa	Known RBP	4.09	□□□□□ -1.75
HHF2	YNL030W	YJL049W	P47048	450 aa		4.09	□□□□□ -1.75
HHF2	YNL030W	EST2	Q06163	884 aa		4.09	□□□□□ -1.75
HHF2	YNL030W	MAG2	Q06436	670 aa	Known RBP	4.09	□□□□□ -1.75
HHF2	YNL030W	BUD21	Q08492	214 aa	Predicted RBP	4.09	□□□□□ -1.75
HHF2	YNL030W	TRP3	P00937	484 aa		4.08	□□□□□ -1.76
HHF2	YNL030W	RPS4A	P0CX35	261 aa	Known RBP	4.08	□□□□□ -1.76
HHF2	YNL030W	RPS4B	P0CX36	261 aa	Known RBP	4.08	□□□□□ -1.76
HHF2	YNL030W	CLN2	P20438	545 aa		4.08	□□□□□ -1.76
HHF2	YNL030W	YGL081W	P53156	320 aa		4.08	□□□□□ -1.76
HHF2	YNL030W	YGR130C	P53278	816 aa		4.08	□□□□□ -1.76
HHF2	YNL030W	ALG12	P53730	551 aa		4.08	□□□□□ -1.76
HHF2	YNL030W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
HHF2	YNL030W	RMD1	Q03441	430 aa		4.08	□□□□□ -1.76
HHF2	YNL030W	CDC34	P14682	295 aa		4.07	□□□□□ -1.76
HHF2	YNL030W	RET1	P22276	1149 aa	Known RBP	4.07	□□□□□ -1.76
HHF2	YNL030W	NFS1	P25374	497 aa		4.07	□□□□□ -1.76
HHF2	YNL030W	MKK2	P32491	506 aa		4.07	□□□□□ -1.76
HHF2	YNL030W	YKR073C	P36153	106 aa		4.07	□□□□□ -1.76
HHF2	YNL030W	SIW14	P53965	281 aa		4.07	□□□□□ -1.76
HHF2	YNL030W	ALD6	P54115	500 aa	Known RBP	4.07	□□□□□ -1.76
HHF2	YNL030W	RSA3	Q05942	220 aa	Known RBP	4.07	□□□□□ -1.76
HHF2	YNL030W	YLR257W	Q06146	321 aa	Known RBP	4.07	□□□□□ -1.76
HHF2	YNL030W	YGR161W-C	Q3E744	92 aa		4.07	□□□□□ -1.76
HHF2	YNL030W	CHS2	P14180	963 aa		4.06	□□□□□ -1.76
HHF2	YNL030W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
HHF2	YNL030W	SMY2	P32909	740 aa	Known RBP	4.06	□□□□□ -1.76
HHF2	YNL030W	RER2	P35196	286 aa		4.06	□□□□□ -1.76
HHF2	YNL030W	KAE1	P36132	386 aa		4.06	□□□□□ -1.76
HHF2	YNL030W	ALG3	P38179	458 aa		4.06	□□□□□ -1.76
HHF2	YNL030W	ATG14	P38270	344 aa		4.06	□□□□□ -1.76
HHF2	YNL030W	FAA4	P47912	694 aa	Known RBP	4.06	□□□□□ -1.76
HHF2	YNL030W	ALT1	P52893	592 aa		4.06	□□□□□ -1.76
HHF2	YNL030W	ALO1	P54783	526 aa	Known RBP	4.06	□□□□□ -1.76
HHF2	YNL030W	EEB1	Q02891	456 aa		4.06	□□□□□ -1.76
HHF2	YNL030W	VPS16	Q03308	798 aa		4.06	□□□□□ -1.76
HHF2	YNL030W	CDC53	Q12018	815 aa	Known RBP	4.06	□□□□□ -1.76
HHF2	YNL030W	CIT2	P08679	460 aa		4.05	□□□□□ -1.76
HHF2	YNL030W	GCD1	P09032	578 aa	Predicted RBP	4.05	□□□□□ -1.76
HHF2	YNL030W	GPB2	P39717	880 aa		4.05	□□□□□ -1.76
HHF2	YNL030W	TPM2	P40414	161 aa		4.05	□□□□□ -1.76
HHF2	YNL030W	MMM1	P41800	426 aa		4.05	□□□□□ -1.76
HHF2	YNL030W	TPP1	Q03796	238 aa		4.05	□□□□□ -1.76
HHF2	YNL030W	RKM2	Q03942	479 aa		4.05	□□□□□ -1.76
HHF2	YNL030W	UTP14	Q04500	899 aa	Known RBP	4.05	□□□□□ -1.76
HHF2	YNL030W	NSE3	Q05541	303 aa		4.05	□□□□□ -1.76
HHF2	YNL030W	RTT10	Q08924	1013 aa		4.05	□□□□□ -1.76
HHF2	YNL030W	SBP1	P10080	294 aa	Known RBP	4.04	□□□□□ -1.76
HHF2	YNL030W	MOT2	P34909	587 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms