RNA–Protein interactions for RNA: YMR001C

CDC5, Transcript of Polo-like kinase, yeast

Gene CDC5, Length 2,118 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC5	YMR001C	EST2	Q06163	884 aa		4.92	□□□□□ -1.62
CDC5	YMR001C	AOS1	Q06624	347 aa		4.92	□□□□□ -1.62
CDC5	YMR001C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
CDC5	YMR001C	ADD66	P36040	267 aa		4.91	□□□□□ -1.62
CDC5	YMR001C	ARL1	P38116	183 aa	Known RBP	4.91	□□□□□ -1.62
CDC5	YMR001C	YBR184W	P38299	523 aa		4.91	□□□□□ -1.62
CDC5	YMR001C	RNH70	P53331	553 aa		4.91	□□□□□ -1.62
CDC5	YMR001C	SHE9	Q04172	456 aa		4.91	□□□□□ -1.62
CDC5	YMR001C	TDA5	Q06417	326 aa	Known RBP	4.91	□□□□□ -1.62
CDC5	YMR001C	FAL1	Q12099	399 aa	Known RBP	4.91	□□□□□ -1.62
CDC5	YMR001C	ALG6	Q12001	544 aa	Known RBP	4.91	□□□□□ -1.62
CDC5	YMR001C	DED1	P06634	604 aa	Known RBP	4.9	□□□□□ -1.62
CDC5	YMR001C	TY1A-NL1	Q12391	440 aa	Known RBP	4.9	□□□□□ -1.62
CDC5	YMR001C	SYP1	P25623	870 aa	Known RBP	4.9	□□□□□ -1.63
CDC5	YMR001C	GAR1	P28007	205 aa	Known RBP	4.9	□□□□□ -1.63
CDC5	YMR001C	SRP40	P32583	406 aa	Predicted RBP	4.9	□□□□□ -1.63
CDC5	YMR001C	ALG14	P38242	237 aa		4.9	□□□□□ -1.63
CDC5	YMR001C	RKM2	Q03942	479 aa		4.9	□□□□□ -1.63
CDC5	YMR001C	CDC53	Q12018	815 aa	Known RBP	4.9	□□□□□ -1.63
CDC5	YMR001C	ELG1	Q12050	791 aa		4.9	□□□□□ -1.63
CDC5	YMR001C	DBP5	P20449	482 aa	Known RBP	4.89	□□□□□ -1.63
CDC5	YMR001C	DBP2	P24783	546 aa	Known RBP	4.89	□□□□□ -1.63
CDC5	YMR001C	RPL8B	P29453	256 aa	Known RBP	4.89	□□□□□ -1.63
CDC5	YMR001C	YKL091C	P33324	310 aa	Known RBP	4.89	□□□□□ -1.63
CDC5	YMR001C	YKL077W	P36081	392 aa		4.89	□□□□□ -1.63
CDC5	YMR001C	ALG3	P38179	458 aa		4.89	□□□□□ -1.63
CDC5	YMR001C	SHU2	P38957	223 aa		4.89	□□□□□ -1.63
CDC5	YMR001C	SBE2	P42223	864 aa	Known RBP	4.89	□□□□□ -1.63
CDC5	YMR001C	INO1	P11986	533 aa		4.88	□□□□□ -1.63
CDC5	YMR001C	TIM23	P32897	222 aa		4.88	□□□□□ -1.63
CDC5	YMR001C	CNN1	P43618	361 aa		4.88	□□□□□ -1.63
CDC5	YMR001C	YGR045C	P53229	120 aa		4.88	□□□□□ -1.63
CDC5	YMR001C	FMP25	Q08023	583 aa		4.88	□□□□□ -1.63
CDC5	YMR001C	GAS5	Q08193	484 aa		4.88	□□□□□ -1.63
CDC5	YMR001C	FLC1	Q08967	793 aa		4.88	□□□□□ -1.63
CDC5	YMR001C	DPH6	Q12429	685 aa		4.88	□□□□□ -1.63
CDC5	YMR001C	AIM44	Q99299	758 aa		4.88	□□□□□ -1.63
CDC5	YMR001C	SBA1	P28707	216 aa	Known RBP	4.88	□□□□□ -1.63
CDC5	YMR001C	REI1	P38344	393 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC5	YMR001C	MAL11	P53048	616 aa		4.88	□□□□□ -1.63
CDC5	YMR001C	ALG12	P53730	551 aa		4.88	□□□□□ -1.63
CDC5	YMR001C	ERR1	P0CX10	437 aa		4.87	□□□□□ -1.63
CDC5	YMR001C	ERR2	P0CX11	437 aa		4.87	□□□□□ -1.63
CDC5	YMR001C	BET3	P36149	193 aa		4.87	□□□□□ -1.63
CDC5	YMR001C	MBP1	P39678	833 aa		4.87	□□□□□ -1.63
CDC5	YMR001C	KIP3	P53086	805 aa	Known RBP	4.87	□□□□□ -1.63
CDC5	YMR001C	NAN1	Q02931	896 aa	Known RBP	4.87	□□□□□ -1.63
CDC5	YMR001C	TAF8	Q03750	510 aa		4.87	□□□□□ -1.63
CDC5	YMR001C	NHA1	Q99271	985 aa		4.87	□□□□□ -1.63
CDC5	YMR001C	HBS1	P32769	611 aa	Known RBP	4.87	□□□□□ -1.63
CDC5	YMR001C	RSP5	P39940	809 aa	Known RBP	4.87	□□□□□ -1.63
CDC5	YMR001C	IRR1	P40541	1150 aa		4.87	□□□□□ -1.63
CDC5	YMR001C	YFL054C	P43549	646 aa		4.87	□□□□□ -1.63
CDC5	YMR001C	CAN1	P04817	590 aa		4.86	□□□□□ -1.63
CDC5	YMR001C	SBP1	P10080	294 aa	Known RBP	4.86	□□□□□ -1.63
CDC5	YMR001C	AFR1	P33304	620 aa		4.86	□□□□□ -1.63
CDC5	YMR001C	NMD2	P38798	1089 aa	Known RBP	4.86	□□□□□ -1.63
CDC5	YMR001C	YGL176C	P46945	554 aa		4.86	□□□□□ -1.63
CDC5	YMR001C	MLS1	P30952	554 aa		4.85	□□□□□ -1.63
CDC5	YMR001C	TIM54	P47045	478 aa		4.85	□□□□□ -1.63
CDC5	YMR001C	RTA1	P53047	317 aa		4.85	□□□□□ -1.63
CDC5	YMR001C	BUD9	P53226	547 aa		4.85	□□□□□ -1.63
CDC5	YMR001C	YER152C	P10356	443 aa		4.85	□□□□□ -1.63
CDC5	YMR001C	RRM3	P38766	723 aa		4.85	□□□□□ -1.63
CDC5	YMR001C	YNR063W	P53749	607 aa		4.85	□□□□□ -1.63
CDC5	YMR001C	EAR1	Q03212	550 aa		4.85	□□□□□ -1.63
CDC5	YMR001C	BUL2	Q03758	920 aa	Known RBP	4.85	□□□□□ -1.63
CDC5	YMR001C	IOC4	Q04213	475 aa		4.85	□□□□□ -1.63
CDC5	YMR001C	SAC7	P17121	654 aa		4.84	□□□□□ -1.63
CDC5	YMR001C	MDJ1	P35191	511 aa		4.84	□□□□□ -1.63
CDC5	YMR001C	YAR028W	P39548	234 aa		4.84	□□□□□ -1.63
CDC5	YMR001C	MTR4	P47047	1073 aa	Known RBP	4.84	□□□□□ -1.63
CDC5	YMR001C	UTP8	P53276	713 aa	Known RBP	4.84	□□□□□ -1.63
CDC5	YMR001C	RKM4	Q12504	494 aa		4.84	□□□□□ -1.63
CDC5	YMR001C	NUP82	P40368	713 aa		4.84	□□□□□ -1.64
CDC5	YMR001C	MSH4	P40965	878 aa	Predicted RBP	4.84	□□□□□ -1.64
CDC5	YMR001C	RSA3	Q05942	220 aa	Known RBP	4.84	□□□□□ -1.64
CDC5	YMR001C	RCL1	Q08096	367 aa	Predicted RBP	4.84	□□□□□ -1.64
CDC5	YMR001C	YCK2	P23292	546 aa	Known RBP	4.83	□□□□□ -1.64
CDC5	YMR001C	RAD27	P26793	382 aa		4.83	□□□□□ -1.64
CDC5	YMR001C	MAE1	P36013	669 aa	Known RBP	4.83	□□□□□ -1.64
CDC5	YMR001C	YKL151C	P36059	337 aa		4.83	□□□□□ -1.64
CDC5	YMR001C	RRP14	P36080	434 aa	Known RBP	4.83	□□□□□ -1.64
CDC5	YMR001C	QNS1	P38795	714 aa	Known RBP	4.83	□□□□□ -1.64
CDC5	YMR001C	NMD3	P38861	518 aa	Known RBP	4.83	□□□□□ -1.64
CDC5	YMR001C	PNT1	P38969	423 aa		4.83	□□□□□ -1.64
CDC5	YMR001C	ALT1	P52893	592 aa		4.83	□□□□□ -1.64
CDC5	YMR001C	DSE4	P53753	1117 aa		4.83	□□□□□ -1.64
CDC5	YMR001C	ELA1	P53861	379 aa	Predicted RBP	4.83	□□□□□ -1.64
CDC5	YMR001C	SPO20	Q04359	397 aa		4.83	□□□□□ -1.64
CDC5	YMR001C	UBX5	Q06682	500 aa		4.83	□□□□□ -1.64
CDC5	YMR001C	PTC5	Q12511	572 aa		4.83	□□□□□ -1.64
CDC5	YMR001C	TOP3	P13099	656 aa		4.82	□□□□□ -1.64
CDC5	YMR001C	RGD1	P38339	666 aa		4.82	□□□□□ -1.64
CDC5	YMR001C	YOR223W	Q12015	292 aa		4.82	□□□□□ -1.64
CDC5	YMR001C	AI3	P03877	415 aa		4.82	□□□□□ -1.64
CDC5	YMR001C	RPL11A	P0C0W9	174 aa	Known RBP	4.82	□□□□□ -1.64
CDC5	YMR001C	KIP1	P28742	1111 aa		4.82	□□□□□ -1.64
CDC5	YMR001C	MRP8	P35719	219 aa		4.82	□□□□□ -1.64
CDC5	YMR001C	PBY1	P38254	753 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms