RNA–Protein interactions for RNA: YML034W

SRC1, Transcript of Inner nuclear membrane protein, yeast

Gene SRC1, Length 2,505 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRC1	YML034W	YPR053C	Q6Q5F3	151 aa		4.13	□□□□□ -1.75
SRC1	YML034W	SSN2	P38931	1420 aa		4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-H	O13535	1793 aa		4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-DR5	P0C2I2	1755 aa		4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-DR6	P0C2I3	1755 aa		4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-LR2	P0C2I5	1755 aa		4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-PR2	P0C2J0	1756 aa		4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-JR1	P47098	1755 aa		4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-ER1	Q03612	1755 aa		4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-ML1	Q04711	1755 aa	Known RBP	4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-GR2	Q12269	1755 aa		4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-OL	Q12273	1755 aa		4.13	□□□□□ -1.75
SRC1	YML034W	TY1B-PL	Q12414	1755 aa	Known RBP	4.13	□□□□□ -1.75
SRC1	YML034W	AI3	P03877	415 aa		4.13	□□□□□ -1.75
SRC1	YML034W	SFA1	P32771	386 aa		4.13	□□□□□ -1.75
SRC1	YML034W	PAM1	P37304	830 aa	Known RBP	4.13	□□□□□ -1.75
SRC1	YML034W	FAR11	P53917	953 aa		4.13	□□□□□ -1.75
SRC1	YML034W	MEC3	Q02574	474 aa		4.13	□□□□□ -1.75
SRC1	YML034W	SKN7	P38889	622 aa		4.12	□□□□□ -1.75
SRC1	YML034W	YGL140C	P53120	1219 aa		4.12	□□□□□ -1.75
SRC1	YML034W	MMS22	Q06164	1454 aa		4.12	□□□□□ -1.75
SRC1	YML034W	YMR074C	Q04773	145 aa		4.12	□□□□□ -1.75
SRC1	YML034W	TOP2	P06786	1428 aa	Known RBP	4.11	□□□□□ -1.75
SRC1	YML034W	HEM13	P11353	328 aa	Known RBP	4.11	□□□□□ -1.75
SRC1	YML034W	SLS1	P42900	643 aa		4.11	□□□□□ -1.75
SRC1	YML034W	KIP3	P53086	805 aa	Known RBP	4.11	□□□□□ -1.75
SRC1	YML034W	SVF1	Q05515	481 aa		4.11	□□□□□ -1.75
SRC1	YML034W	PUS1	Q12211	544 aa	Known RBP	4.11	□□□□□ -1.75
SRC1	YML034W	YRF1-1	P0CX20	1796 aa		4.11	□□□□□ -1.75
SRC1	YML034W	YRF1-5	P0CX21	1796 aa		4.11	□□□□□ -1.75
SRC1	YML034W	YRF1-8	P0CX22	1796 aa		4.11	□□□□□ -1.75
SRC1	YML034W	TY2B-B	Q12491	1770 aa		4.11	□□□□□ -1.75
SRC1	YML034W	RDH54	P38086	958 aa		4.11	□□□□□ -1.75
SRC1	YML034W	ARL1	P38116	183 aa	Known RBP	4.11	□□□□□ -1.75
SRC1	YML034W	REI1	P38344	393 aa	Predicted RBP	4.11	□□□□□ -1.75
SRC1	YML034W	NEM1	P38757	446 aa		4.11	□□□□□ -1.75
SRC1	YML034W	NCE103	P53615	221 aa		4.11	□□□□□ -1.75
SRC1	YML034W	YLL054C	Q12244	843 aa		4.11	□□□□□ -1.75
SRC1	YML034W	NUP159	P40477	1460 aa		4.1	□□□□□ -1.75
SRC1	YML034W	SEC23	P15303	768 aa	Known RBP	4.1	□□□□□ -1.75
SRC1	YML034W	VMA4	P22203	233 aa	Known RBP	4.1	□□□□□ -1.75
SRC1	YML034W	RSC6	P25632	483 aa		4.1	□□□□□ -1.75
SRC1	YML034W	TAT1	P38085	619 aa		4.1	□□□□□ -1.75
SRC1	YML034W	XKS1	P42826	600 aa		4.1	□□□□□ -1.75
SRC1	YML034W	UTP5	Q04177	643 aa	Known RBP	4.1	□□□□□ -1.75
SRC1	YML034W	ALG6	Q12001	544 aa	Known RBP	4.1	□□□□□ -1.75
SRC1	YML034W	YOR223W	Q12015	292 aa		4.1	□□□□□ -1.75
SRC1	YML034W	ARI1	P53111	347 aa	Known RBP	4.09	□□□□□ -1.75
SRC1	YML034W	NTE1	Q04958	1679 aa		4.09	□□□□□ -1.76
SRC1	YML034W	GCR1	P07261	785 aa		4.09	□□□□□ -1.76
SRC1	YML034W	PET112	P33893	541 aa		4.09	□□□□□ -1.76
SRC1	YML034W	MTR4	P47047	1073 aa	Known RBP	4.09	□□□□□ -1.76
SRC1	YML034W	MCA1	Q08601	432 aa		4.09	□□□□□ -1.76
SRC1	YML034W	NOP7	P53261	605 aa	Known RBP	4.08	□□□□□ -1.76
SRC1	YML034W	JIP5	Q06214	492 aa	Predicted RBP	4.08	□□□□□ -1.76
SRC1	YML034W	HDA2	Q06629	674 aa		4.08	□□□□□ -1.76
SRC1	YML034W	REC8	Q12188	680 aa		4.08	□□□□□ -1.76
SRC1	YML034W	TAF13	P11747	167 aa		4.07	□□□□□ -1.76
SRC1	YML034W	DOT1	Q04089	582 aa	Known RBP	4.07	□□□□□ -1.76
SRC1	YML034W	NUP170	P38181	1502 aa		4.07	□□□□□ -1.76
SRC1	YML034W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SRC1	YML034W	NAP1	P25293	417 aa	Known RBP	4.07	□□□□□ -1.76
SRC1	YML034W	MNR2	P35724	969 aa		4.07	□□□□□ -1.76
SRC1	YML034W	SPO74	P45819	413 aa		4.07	□□□□□ -1.76
SRC1	YML034W	YGR045C	P53229	120 aa		4.07	□□□□□ -1.76
SRC1	YML034W	MRL1	Q06815	381 aa		4.07	□□□□□ -1.76
SRC1	YML034W	TY1B-DR3	Q99231	1755 aa		4.07	□□□□□ -1.76
SRC1	YML034W	GPT2	P36148	743 aa		4.06	□□□□□ -1.76
SRC1	YML034W	GNP1	P48813	663 aa		4.06	□□□□□ -1.76
SRC1	YML034W	EST2	Q06163	884 aa		4.06	□□□□□ -1.76
SRC1	YML034W	AVO1	Q08236	1176 aa		4.06	□□□□□ -1.76
SRC1	YML034W	ADD66	P36040	267 aa		4.06	□□□□□ -1.76
SRC1	YML034W	RTT10	Q08924	1013 aa		4.06	□□□□□ -1.76
SRC1	YML034W	MET10	P39692	1035 aa		4.05	□□□□□ -1.76
SRC1	YML034W	CCT8	P47079	568 aa	Known RBP	4.05	□□□□□ -1.76
SRC1	YML034W	ELA1	P53861	379 aa	Predicted RBP	4.05	□□□□□ -1.76
SRC1	YML034W	SIW14	P53965	281 aa		4.05	□□□□□ -1.76
SRC1	YML034W	YPL034W	Q03083	165 aa		4.05	□□□□□ -1.76
SRC1	YML034W	URN1	Q06525	465 aa	Known RBP	4.05	□□□□□ -1.76
SRC1	YML034W	RPO21	P04050	1733 aa	Known RBP	4.05	□□□□□ -1.76
SRC1	YML034W	NAM7	P30771	971 aa	Known RBP	4.05	□□□□□ -1.76
SRC1	YML034W	DUT1	P33317	147 aa		4.05	□□□□□ -1.76
SRC1	YML034W	ATG14	P38270	344 aa		4.05	□□□□□ -1.76
SRC1	YML034W	YAR028W	P39548	234 aa		4.05	□□□□□ -1.76
SRC1	YML034W	HXT13	P39924	564 aa		4.05	□□□□□ -1.76
SRC1	YML034W	HXT17	P53631	564 aa		4.05	□□□□□ -1.76
SRC1	YML034W	YNR063W	P53749	607 aa		4.05	□□□□□ -1.76
SRC1	YML034W	HXT15	P54854	567 aa		4.05	□□□□□ -1.76
SRC1	YML034W	VPS16	Q03308	798 aa		4.05	□□□□□ -1.76
SRC1	YML034W	PIN2	Q12057	282 aa		4.05	□□□□□ -1.76
SRC1	YML034W	DED1	P06634	604 aa	Known RBP	4.04	□□□□□ -1.76
SRC1	YML034W	CDC34	P14682	295 aa		4.04	□□□□□ -1.76
SRC1	YML034W	PGM1	P33401	570 aa	Known RBP	4.04	□□□□□ -1.76
SRC1	YML034W	MAD1	P40957	749 aa		4.04	□□□□□ -1.76
SRC1	YML034W	RKM2	Q03942	479 aa		4.04	□□□□□ -1.76
SRC1	YML034W	GIC2	Q06648	383 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms