RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W YLR225CQ05948 407 aaKnown RBP6.64□□□□□ -1.35
VPS36YLR417W FMP25Q08023 583 aa6.64□□□□□ -1.35
VPS36YLR417W PHO8P11491 566 aa6.63□□□□□ -1.35
VPS36YLR417W PBY1P38254 753 aa6.63□□□□□ -1.35
VPS36YLR417W NEM1P38757 446 aa6.63□□□□□ -1.35
VPS36YLR417W LCB5Q06147 687 aaKnown RBP6.63□□□□□ -1.35
VPS36YLR417W SYT1Q06836 1226 aa6.63□□□□□ -1.35
VPS36YLR417W YLR125WQ12138 136 aa6.63□□□□□ -1.35
VPS36YLR417W HSP60P19882 572 aaKnown RBP6.62□□□□□ -1.35
VPS36YLR417W SYP1P25623 870 aaKnown RBP6.62□□□□□ -1.35
VPS36YLR417W TIM23P32897 222 aa6.62□□□□□ -1.35
VPS36YLR417W SNF7P39929 240 aaKnown RBP6.62□□□□□ -1.35
VPS36YLR417W SLS1P42900 643 aa6.62□□□□□ -1.35
VPS36YLR417W RKM2Q03942 479 aa6.62□□□□□ -1.35
VPS36YLR417W UTP14Q04500 899 aaKnown RBP6.62□□□□□ -1.35
VPS36YLR417W DED1P06634 604 aaKnown RBP6.62□□□□□ -1.35
VPS36YLR417W INO1P11986 533 aa6.62□□□□□ -1.35
VPS36YLR417W GAL11P19659 1081 aa6.62□□□□□ -1.35
VPS36YLR417W PIN4P34217 668 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
VPS36YLR417W CEM1P39525 442 aa6.62□□□□□ -1.35
VPS36YLR417W ERP6P53198 216 aa6.62□□□□□ -1.35
VPS36YLR417W SRC1Q03707 834 aa6.62□□□□□ -1.35
VPS36YLR417W TIF35Q04067 274 aaKnown RBP6.62□□□□□ -1.35
VPS36YLR417W ESC2Q06340 456 aa6.62□□□□□ -1.35
VPS36YLR417W RKM4Q12504 494 aa6.62□□□□□ -1.35
VPS36YLR417W CIT1P00890 479 aa6.61□□□□□ -1.35
VPS36YLR417W SBP1P10080 294 aaKnown RBP6.61□□□□□ -1.35
VPS36YLR417W MNN1P39106 762 aa6.61□□□□□ -1.35
VPS36YLR417W MEC3Q02574 474 aa6.61□□□□□ -1.35
VPS36YLR417W MET22P32179 357 aa6.6□□□□□ -1.35
VPS36YLR417W CNN1P43618 361 aa6.6□□□□□ -1.35
VPS36YLR417W UTP8P53276 713 aaKnown RBP6.6□□□□□ -1.35
VPS36YLR417W SOK2P53438 785 aaPredicted RBP6.6□□□□□ -1.35
VPS36YLR417W SPO71Q03868 1245 aa6.6□□□□□ -1.35
VPS36YLR417W YDR444WQ04093 687 aa6.6□□□□□ -1.35
VPS36YLR417W EAF1Q06337 982 aa6.6□□□□□ -1.35
VPS36YLR417W DBP5P20449 482 aaKnown RBP6.59□□□□□ -1.35
VPS36YLR417W ATG14P38270 344 aa6.59□□□□□ -1.35
VPS36YLR417W PFD1P46988 109 aa6.59□□□□□ -1.35
VPS36YLR417W GCV1P48015 400 aa6.59□□□□□ -1.35
VPS36YLR417W CAN1P04817 590 aa6.59□□□□□ -1.36
VPS36YLR417W MOT2P34909 587 aaKnown RBP6.59□□□□□ -1.36
VPS36YLR417W GIP2P40036 548 aa6.59□□□□□ -1.36
VPS36YLR417W RAT1Q02792 1006 aaKnown RBP6.59□□□□□ -1.36
VPS36YLR417W SLP1Q12232 587 aa6.59□□□□□ -1.36
VPS36YLR417W ARE1P25628 610 aa6.58□□□□□ -1.36
VPS36YLR417W YKL107WP34251 309 aa6.58□□□□□ -1.36
VPS36YLR417W ACO2P39533 789 aa6.58□□□□□ -1.36
VPS36YLR417W HUL4P40985 892 aa6.58□□□□□ -1.36
VPS36YLR417W YGR161W-CQ3E744 92 aa6.58□□□□□ -1.36
VPS36YLR417W PRP9P19736 530 aaKnown RBP6.57□□□□□ -1.36
VPS36YLR417W THI4P32318 326 aa6.57□□□□□ -1.36
VPS36YLR417W PAN5P38787 379 aa6.57□□□□□ -1.36
VPS36YLR417W YGL176CP46945 554 aa6.57□□□□□ -1.36
VPS36YLR417W YGL081WP53156 320 aa6.57□□□□□ -1.36
VPS36YLR417W KNS1P32350 737 aaPredicted RBP6.56□□□□□ -1.36
VPS36YLR417W REI1P38344 393 aaPredicted RBP6.56□□□□□ -1.36
VPS36YLR417W POL5P39985 1022 aaKnown RBP6.56□□□□□ -1.36
VPS36YLR417W YIR007WP40566 764 aa6.56□□□□□ -1.36
VPS36YLR417W HNT2P49775 206 aa6.56□□□□□ -1.36
VPS36YLR417W YLL054CQ12244 843 aa6.56□□□□□ -1.36
VPS36YLR417W ERR1P0CX10 437 aa6.56□□□□□ -1.36
VPS36YLR417W ERR2P0CX11 437 aa6.56□□□□□ -1.36
VPS36YLR417W PDC5P16467 563 aaKnown RBP6.56□□□□□ -1.36
VPS36YLR417W AFG2P32794 780 aa6.56□□□□□ -1.36
VPS36YLR417W MPH1P40562 993 aa6.56□□□□□ -1.36
VPS36YLR417W TAF8Q03750 510 aa6.56□□□□□ -1.36
VPS36YLR417W AOS1Q06624 347 aa6.56□□□□□ -1.36
VPS36YLR417W PUF4P25339 888 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36 RIP-Chip
VPS36YLR417W MCM7P38132 845 aa6.55□□□□□ -1.36
VPS36YLR417W RGD1P38339 666 aa6.55□□□□□ -1.36
VPS36YLR417W LAP2Q10740 671 aa6.55□□□□□ -1.36
VPS36YLR417W YPL066WQ12194 479 aa6.55□□□□□ -1.36
VPS36YLR417W NAR1P23503 491 aaKnown RBP6.54□□□□□ -1.36
VPS36YLR417W SCT1P32784 759 aa6.54□□□□□ -1.36
VPS36YLR417W MSH4P40965 878 aaPredicted RBP6.54□□□□□ -1.36
VPS36YLR417W ALR2P43553 858 aa6.54□□□□□ -1.36
VPS36YLR417W GIS4Q04233 774 aa6.54□□□□□ -1.36
VPS36YLR417W GPM1P00950 247 aaKnown RBP6.53□□□□□ -1.36
VPS36YLR417W SAC7P17121 654 aa6.53□□□□□ -1.36
VPS36YLR417W ALG3P38179 458 aa6.53□□□□□ -1.36
VPS36YLR417W MBP1P39678 833 aa6.53□□□□□ -1.36
VPS36YLR417W YNR063WP53749 607 aa6.53□□□□□ -1.36
VPS36YLR417W PTC5Q12511 572 aa6.53□□□□□ -1.36
VPS36YLR417W TSR4P25040 408 aa6.53□□□□□ -1.36
VPS36YLR417W YAR028WP39548 234 aa6.53□□□□□ -1.36
VPS36YLR417W TED1P40533 473 aa6.53□□□□□ -1.36
VPS36YLR417W SPO74P45819 413 aa6.53□□□□□ -1.36
VPS36YLR417W VPS53P47061 822 aa6.53□□□□□ -1.36
VPS36YLR417W YJR142WP47173 342 aa6.53□□□□□ -1.36
VPS36YLR417W UBX5Q06682 500 aa6.53□□□□□ -1.36
VPS36YLR417W YDL124WQ07551 312 aaKnown RBP6.53□□□□□ -1.36
VPS36YLR417W ELG1Q12050 791 aa6.53□□□□□ -1.36
VPS36YLR417W TY4B-PA0A0B7P3V8 1104 aa6.52□□□□□ -1.37
VPS36YLR417W MLS1P30952 554 aa6.52□□□□□ -1.37
VPS36YLR417W HSE1P38753 452 aa6.52□□□□□ -1.37
VPS36YLR417W AVO1Q08236 1176 aa6.52□□□□□ -1.37
VPS36YLR417W GNT1Q12096 491 aa6.52□□□□□ -1.37
VPS36YLR417W TY4A-HQ6Q5P6 413 aa6.52□□□□□ -1.37
VPS36YLR417W MSH2P25847 964 aa6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms