RNA–Protein interactions for RNA: YLR301W

HRI1, Transcript of Protein of unknown function that interacts with Sec72p and Hrr25p, yeast

Gene HRI1, Length 735 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRI1	YLR301W	PEX13	P80667	386 aa		4.88	□□□□□ -1.63
HRI1	YLR301W	RSA3	Q05942	220 aa	Known RBP	4.88	□□□□□ -1.63
HRI1	YLR301W	LAP2	Q10740	671 aa		4.88	□□□□□ -1.63
HRI1	YLR301W	PHO4	P07270	312 aa	Known RBP	4.87	□□□□□ -1.63
HRI1	YLR301W	VMA4	P22203	233 aa	Known RBP	4.87	□□□□□ -1.63
HRI1	YLR301W	MDL2	P33311	773 aa		4.87	□□□□□ -1.63
HRI1	YLR301W	YHL050C	P38721	697 aa		4.87	□□□□□ -1.63
HRI1	YLR301W	YHR219W	P38900	624 aa		4.87	□□□□□ -1.63
HRI1	YLR301W	GIP4	P39732	760 aa		4.87	□□□□□ -1.63
HRI1	YLR301W	HRK1	Q08732	759 aa	Known RBP	4.87	□□□□□ -1.63
HRI1	YLR301W	KAR2	P16474	682 aa	Known RBP	4.86	□□□□□ -1.63
HRI1	YLR301W	GCD6	P32501	712 aa	Known RBP	4.86	□□□□□ -1.63
HRI1	YLR301W	UGA4	P32837	571 aa		4.86	□□□□□ -1.63
HRI1	YLR301W	AIM3	P38266	947 aa	Known RBP	4.86	□□□□□ -1.63
HRI1	YLR301W	ETP1	P38748	585 aa	Known RBP	4.86	□□□□□ -1.63
HRI1	YLR301W	RSM26	P47141	266 aa		4.86	□□□□□ -1.63
HRI1	YLR301W	ULP1	Q02724	621 aa		4.86	□□□□□ -1.63
HRI1	YLR301W	DAL4	Q04895	635 aa		4.86	□□□□□ -1.63
HRI1	YLR301W	FLR1	P38124	548 aa		4.85	□□□□□ -1.63
HRI1	YLR301W	ATG14	P38270	344 aa		4.85	□□□□□ -1.63
HRI1	YLR301W	FOL2	P51601	243 aa	Known RBP	4.85	□□□□□ -1.63
HRI1	YLR301W	RIM8	P53179	542 aa		4.85	□□□□□ -1.63
HRI1	YLR301W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
HRI1	YLR301W	SRO9	P25567	434 aa	Known RBP	4.84	□□□□□ -1.63
HRI1	YLR301W	SQT1	P35184	431 aa		4.84	□□□□□ -1.63
HRI1	YLR301W	QNS1	P38795	714 aa	Known RBP	4.84	□□□□□ -1.63
HRI1	YLR301W	PEX28	P38848	579 aa		4.84	□□□□□ -1.63
HRI1	YLR301W	YNR063W	P53749	607 aa		4.84	□□□□□ -1.63
HRI1	YLR301W	RDH54	P38086	958 aa		4.83	□□□□□ -1.64
HRI1	YLR301W	YJL045W	P47052	634 aa		4.83	□□□□□ -1.64
HRI1	YLR301W	RKM2	Q03942	479 aa		4.83	□□□□□ -1.64
HRI1	YLR301W	SOD2	P00447	233 aa		4.82	□□□□□ -1.64
HRI1	YLR301W	MET4	P32389	672 aa		4.82	□□□□□ -1.64
HRI1	YLR301W	ADD66	P36040	267 aa		4.82	□□□□□ -1.64
HRI1	YLR301W	DAK2	P43550	591 aa		4.82	□□□□□ -1.64
HRI1	YLR301W	HDA2	Q06629	674 aa		4.82	□□□□□ -1.64
HRI1	YLR301W	AIM26	P32858	118 aa		4.81	□□□□□ -1.64
HRI1	YLR301W	PPX1	P38698	397 aa		4.81	□□□□□ -1.64
HRI1	YLR301W	SSF1	P38789	453 aa	Predicted RBP	4.81	□□□□□ -1.64
HRI1	YLR301W	VPS53	P47061	822 aa		4.81	□□□□□ -1.64
HRI1	YLR301W	YGL140C	P53120	1219 aa		4.81	□□□□□ -1.64
HRI1	YLR301W	SNO2	P53823	222 aa		4.81	□□□□□ -1.64
HRI1	YLR301W	TOS4	Q06266	489 aa		4.81	□□□□□ -1.64
HRI1	YLR301W	OXR1	Q08952	273 aa		4.81	□□□□□ -1.64
HRI1	YLR301W	YPL277C	Q08989	487 aa		4.81	□□□□□ -1.64
HRI1	YLR301W	HEM13	P11353	328 aa	Known RBP	4.8	□□□□□ -1.64
HRI1	YLR301W	YSC84	P32793	468 aa		4.8	□□□□□ -1.64
HRI1	YLR301W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
HRI1	YLR301W	YPL109C	Q02981	657 aa		4.8	□□□□□ -1.64
HRI1	YLR301W	ADI1	Q03677	179 aa		4.8	□□□□□ -1.64
HRI1	YLR301W	RSC58	Q07979	502 aa		4.8	□□□□□ -1.64
HRI1	YLR301W	RPS13	P05756	151 aa	Known RBP	4.79	□□□□□ -1.64
HRI1	YLR301W	TOD6	P34219	525 aa		4.79	□□□□□ -1.64
HRI1	YLR301W	STM1	P39015	273 aa	Known RBP	4.79	□□□□□ -1.64
HRI1	YLR301W	MSC6	Q08818	692 aa	Known RBP	4.79	□□□□□ -1.64
HRI1	YLR301W	SEC23	P15303	768 aa	Known RBP	4.78	□□□□□ -1.64
HRI1	YLR301W	EST2	Q06163	884 aa		4.78	□□□□□ -1.64
HRI1	YLR301W	NBA1	Q08229	501 aa	Known RBP	4.78	□□□□□ -1.64
HRI1	YLR301W	SPS1	P08458	490 aa		4.77	□□□□□ -1.65
HRI1	YLR301W	AFG2	P32794	780 aa		4.77	□□□□□ -1.65
HRI1	YLR301W	ENV11	P53246	860 aa		4.77	□□□□□ -1.65
HRI1	YLR301W	KIP1	P28742	1111 aa		4.76	□□□□□ -1.65
HRI1	YLR301W	FAA3	P39002	694 aa		4.76	□□□□□ -1.65
HRI1	YLR301W	RCL1	Q08096	367 aa	Predicted RBP	4.76	□□□□□ -1.65
HRI1	YLR301W	WHI5	Q12416	295 aa		4.76	□□□□□ -1.65
HRI1	YLR301W	COQ4	O13525	335 aa		4.75	□□□□□ -1.65
HRI1	YLR301W	HXK1	P04806	485 aa	Known RBP	4.75	□□□□□ -1.65
HRI1	YLR301W	BAP2	P38084	609 aa		4.75	□□□□□ -1.65
HRI1	YLR301W	PIC2	P40035	300 aa		4.75	□□□□□ -1.65
HRI1	YLR301W	PTC5	Q12511	572 aa		4.75	□□□□□ -1.65
HRI1	YLR301W	YLR358C	O13565	187 aa		4.74	□□□□□ -1.65
HRI1	YLR301W	CCZ1	P38273	704 aa		4.74	□□□□□ -1.65
HRI1	YLR301W	THI12	P42883	340 aa		4.74	□□□□□ -1.65
HRI1	YLR301W	THI5	P43534	340 aa		4.74	□□□□□ -1.65
HRI1	YLR301W	THI11	P47183	340 aa		4.74	□□□□□ -1.65
HRI1	YLR301W	TNA1	P53322	534 aa		4.74	□□□□□ -1.65
HRI1	YLR301W	HOS3	Q02959	697 aa	Known RBP	4.74	□□□□□ -1.65
HRI1	YLR301W	CLU1	Q03690	1277 aa	Known RBP	4.74	□□□□□ -1.65
HRI1	YLR301W	THI13	Q07748	340 aa		4.74	□□□□□ -1.65
HRI1	YLR301W	TAF13	P11747	167 aa		4.73	□□□□□ -1.65
HRI1	YLR301W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
HRI1	YLR301W	RPT1	P33299	467 aa	Known RBP	4.73	□□□□□ -1.65
HRI1	YLR301W	GPB2	P39717	880 aa		4.73	□□□□□ -1.65
HRI1	YLR301W	YDR132C	Q03900	495 aa		4.73	□□□□□ -1.65
HRI1	YLR301W	SGD1	Q06132	899 aa		4.73	□□□□□ -1.65
HRI1	YLR301W	YOR352W	Q08816	343 aa		4.73	□□□□□ -1.65
HRI1	YLR301W	ALG3	P38179	458 aa		4.72	□□□□□ -1.65
HRI1	YLR301W	LAM1	P38851	1228 aa		4.72	□□□□□ -1.65
HRI1	YLR301W	PIK1	P39104	1066 aa		4.72	□□□□□ -1.65
HRI1	YLR301W	SEC26	P41810	973 aa	Known RBP	4.72	□□□□□ -1.65
HRI1	YLR301W	HNT2	P49775	206 aa		4.72	□□□□□ -1.65
HRI1	YLR301W	DED1	P06634	604 aa	Known RBP	4.71	□□□□□ -1.66
HRI1	YLR301W	SNF5	P18480	905 aa		4.71	□□□□□ -1.66
HRI1	YLR301W	SEC20	P28791	383 aa		4.71	□□□□□ -1.66
HRI1	YLR301W	MEF2	P39677	819 aa		4.71	□□□□□ -1.66
HRI1	YLR301W	RPN3	P40016	523 aa	Known RBP	4.71	□□□□□ -1.66
HRI1	YLR301W	GSF2	Q04697	403 aa	Known RBP	4.71	□□□□□ -1.66
HRI1	YLR301W	RSB1	Q08417	382 aa		4.71	□□□□□ -1.66
HRI1	YLR301W	YPL260W	Q08977	551 aa		4.71	□□□□□ -1.66
HRI1	YLR301W	ABZ1	P37254	787 aa	Predicted RBP	4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms