RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeast

Gene YPT6, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT6	YLR262C	NOG1	Q02892	647 aa	Known RBP	5.92	□□□□□ -1.46
YPT6	YLR262C	TOS4	Q06266	489 aa		5.92	□□□□□ -1.46
YPT6	YLR262C	CDA2	Q06703	312 aa		5.92	□□□□□ -1.46
YPT6	YLR262C	LPX1	Q12405	387 aa	Known RBP	5.92	□□□□□ -1.46
YPT6	YLR262C	GCD6	P32501	712 aa	Known RBP	5.91	□□□□□ -1.46
YPT6	YLR262C	UGA4	P32837	571 aa		5.91	□□□□□ -1.46
YPT6	YLR262C	TSA1	P34760	196 aa	Known RBP	5.91	□□□□□ -1.46
YPT6	YLR262C	HSE1	P38753	452 aa		5.91	□□□□□ -1.46
YPT6	YLR262C	ATE1	P16639	503 aa		5.9	□□□□□ -1.46
YPT6	YLR262C	RET1	P22276	1149 aa	Known RBP	5.9	□□□□□ -1.46
YPT6	YLR262C	MSH3	P25336	1018 aa		5.9	□□□□□ -1.46
YPT6	YLR262C	YKL222C	P35995	705 aa		5.9	□□□□□ -1.46
YPT6	YLR262C	PEX13	P80667	386 aa		5.9	□□□□□ -1.46
YPT6	YLR262C	LAP2	Q10740	671 aa		5.9	□□□□□ -1.46
YPT6	YLR262C	KAR2	P16474	682 aa	Known RBP	5.89	□□□□□ -1.47
YPT6	YLR262C	RSM26	P47141	266 aa		5.89	□□□□□ -1.47
YPT6	YLR262C	UTP5	Q04177	643 aa	Known RBP	5.89	□□□□□ -1.47
YPT6	YLR262C	DAL4	Q04895	635 aa		5.89	□□□□□ -1.47
YPT6	YLR262C	YLR257W	Q06146	321 aa	Known RBP	5.89	□□□□□ -1.47
YPT6	YLR262C	PRP40	P33203	583 aa	Known RBP	5.88	□□□□□ -1.47
YPT6	YLR262C	VPS35	P34110	944 aa		5.88	□□□□□ -1.47
YPT6	YLR262C	SQT1	P35184	431 aa		5.88	□□□□□ -1.47
YPT6	YLR262C	NMD3	P38861	518 aa	Known RBP	5.88	□□□□□ -1.47
YPT6	YLR262C	VMA4	P22203	233 aa	Known RBP	5.87	□□□□□ -1.47
YPT6	YLR262C	YHL012W	P38709	493 aa		5.87	□□□□□ -1.47
YPT6	YLR262C	FAA3	P39002	694 aa		5.87	□□□□□ -1.47
YPT6	YLR262C	XKS1	P42826	600 aa		5.87	□□□□□ -1.47
YPT6	YLR262C	FOL2	P51601	243 aa	Known RBP	5.87	□□□□□ -1.47
YPT6	YLR262C	RSA3	Q05942	220 aa	Known RBP	5.87	□□□□□ -1.47
YPT6	YLR262C	ESC8	Q08119	714 aa		5.87	□□□□□ -1.47
YPT6	YLR262C	HRK1	Q08732	759 aa	Known RBP	5.87	□□□□□ -1.47
YPT6	YLR262C	YCR015C	P25616	317 aa		5.86	□□□□□ -1.47
YPT6	YLR262C	HEM3	P28789	327 aa		5.86	□□□□□ -1.47
YPT6	YLR262C	YNR063W	P53749	607 aa		5.86	□□□□□ -1.47
YPT6	YLR262C	OXR1	Q08952	273 aa		5.86	□□□□□ -1.47
YPT6	YLR262C	MCM2	P29469	868 aa		5.85	□□□□□ -1.47
YPT6	YLR262C	MRPL22	P53881	309 aa		5.85	□□□□□ -1.47
YPT6	YLR262C	ULP1	Q02724	621 aa		5.85	□□□□□ -1.47
YPT6	YLR262C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.84	□□□□□ -1.47	not detected
YPT6	YLR262C	PRP6	P19735	899 aa	Predicted RBP	5.84	□□□□□ -1.47
YPT6	YLR262C	MDL2	P33311	773 aa		5.84	□□□□□ -1.47
YPT6	YLR262C	MGE1	P38523	228 aa		5.84	□□□□□ -1.47
YPT6	YLR262C	RRP15	Q06511	250 aa	Predicted RBP	5.84	□□□□□ -1.47
YPT6	YLR262C	SAM35	P14693	329 aa		5.83	□□□□□ -1.48
YPT6	YLR262C	THI80	P35202	319 aa		5.83	□□□□□ -1.48
YPT6	YLR262C	ETP1	P38748	585 aa	Known RBP	5.83	□□□□□ -1.48
YPT6	YLR262C	PEX28	P38848	579 aa		5.83	□□□□□ -1.48
YPT6	YLR262C	FYV10	P40492	516 aa		5.83	□□□□□ -1.48
YPT6	YLR262C	SPR28	Q04921	423 aa		5.83	□□□□□ -1.48
YPT6	YLR262C	YDL177C	Q12257	170 aa		5.83	□□□□□ -1.48
YPT6	YLR262C	AIM3	P38266	947 aa	Known RBP	5.82	□□□□□ -1.48
YPT6	YLR262C	SRO9	P25567	434 aa	Known RBP	5.81	□□□□□ -1.48
YPT6	YLR262C	AIM26	P32858	118 aa		5.81	□□□□□ -1.48
YPT6	YLR262C	QNS1	P38795	714 aa	Known RBP	5.81	□□□□□ -1.48
YPT6	YLR262C	GIP4	P39732	760 aa		5.81	□□□□□ -1.48
YPT6	YLR262C	RPS26A	P39938	119 aa	Known RBP	5.81	□□□□□ -1.48
YPT6	YLR262C	RPS26B	P39939	119 aa	Known RBP	5.81	□□□□□ -1.48
YPT6	YLR262C	YJL045W	P47052	634 aa		5.81	□□□□□ -1.48
YPT6	YLR262C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.81	□□□□□ -1.48	not detected
YPT6	YLR262C	RKM2	Q03942	479 aa		5.81	□□□□□ -1.48
YPT6	YLR262C	HXK1	P04806	485 aa	Known RBP	5.8	□□□□□ -1.48
YPT6	YLR262C	SEC8	P32855	1065 aa		5.8	□□□□□ -1.48
YPT6	YLR262C	ADD66	P36040	267 aa		5.8	□□□□□ -1.48
YPT6	YLR262C	TAF1	P46677	1066 aa		5.8	□□□□□ -1.48
YPT6	YLR262C	VPS53	P47061	822 aa		5.8	□□□□□ -1.48
YPT6	YLR262C	RIM8	P53179	542 aa		5.8	□□□□□ -1.48
YPT6	YLR262C	OYE2	Q03558	400 aa	Known RBP	5.8	□□□□□ -1.48
YPT6	YLR262C	YJR107W	P47145	328 aa		5.79	□□□□□ -1.48
YPT6	YLR262C	SNO2	P53823	222 aa		5.79	□□□□□ -1.48
YPT6	YLR262C	NBA1	Q08229	501 aa	Known RBP	5.79	□□□□□ -1.48
YPT6	YLR262C	RDH54	P38086	958 aa		5.78	□□□□□ -1.48
YPT6	YLR262C	YGL140C	P53120	1219 aa		5.78	□□□□□ -1.48
YPT6	YLR262C	YGR122W	P53272	402 aa		5.78	□□□□□ -1.48
YPT6	YLR262C	YPL109C	Q02981	657 aa		5.78	□□□□□ -1.48
YPT6	YLR262C	ADI1	Q03677	179 aa		5.78	□□□□□ -1.48
YPT6	YLR262C	ASF1	P32447	279 aa		5.77	□□□□□ -1.49
YPT6	YLR262C	FLR1	P38124	548 aa		5.77	□□□□□ -1.49
YPT6	YLR262C	SOD2	P00447	233 aa		5.76	□□□□□ -1.49
YPT6	YLR262C	PEP7	P32609	515 aa		5.76	□□□□□ -1.49
YPT6	YLR262C	YSC84	P32793	468 aa		5.76	□□□□□ -1.49
YPT6	YLR262C	EST2	Q06163	884 aa		5.76	□□□□□ -1.49
YPT6	YLR262C	RSC58	Q07979	502 aa		5.76	□□□□□ -1.49
YPT6	YLR262C	RAD2	P07276	1031 aa		5.75	□□□□□ -1.49
YPT6	YLR262C	SPS1	P08458	490 aa		5.75	□□□□□ -1.49
YPT6	YLR262C	CYC8	P14922	966 aa		5.75	□□□□□ -1.49
YPT6	YLR262C	PIC2	P40035	300 aa		5.75	□□□□□ -1.49
YPT6	YLR262C	YPL277C	Q08989	487 aa		5.75	□□□□□ -1.49
YPT6	YLR262C	COQ4	O13525	335 aa		5.74	□□□□□ -1.49
YPT6	YLR262C	RPS13	P05756	151 aa	Known RBP	5.74	□□□□□ -1.49
YPT6	YLR262C	TOD6	P34219	525 aa		5.74	□□□□□ -1.49
YPT6	YLR262C	ENV11	P53246	860 aa		5.74	□□□□□ -1.49
YPT6	YLR262C	YOR352W	Q08816	343 aa		5.74	□□□□□ -1.49
YPT6	YLR262C	HEM13	P11353	328 aa	Known RBP	5.73	□□□□□ -1.49
YPT6	YLR262C	SEC23	P15303	768 aa	Known RBP	5.73	□□□□□ -1.49
YPT6	YLR262C	PRE9	P23638	258 aa	Known RBP	5.73	□□□□□ -1.49
YPT6	YLR262C	CCZ1	P38273	704 aa		5.73	□□□□□ -1.49
YPT6	YLR262C	MRPS18	P42847	217 aa		5.73	□□□□□ -1.49
YPT6	YLR262C	PTC5	Q12511	572 aa		5.73	□□□□□ -1.49
YPT6	YLR262C	DED1	P06634	604 aa	Known RBP	5.72	□□□□□ -1.49
YPT6	YLR262C	KIP1	P28742	1111 aa		5.72	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms