RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B IRC10Q08118 586 aa4.02□□□□□ -1.77
YLR227W-BYLR227W-B SUT2Q12286 268 aa4.02□□□□□ -1.77
YLR227W-BYLR227W-B AI3P03877 415 aa4.02□□□□□ -1.77
YLR227W-BYLR227W-B BRF1P29056 596 aa4.02□□□□□ -1.77
YLR227W-BYLR227W-B SKP2P42843 763 aa4.02□□□□□ -1.77
YLR227W-BYLR227W-B CDA1Q06702 301 aa4.02□□□□□ -1.77
YLR227W-BYLR227W-B MAK21Q12176 1025 aaKnown RBP4.02□□□□□ -1.77
YLR227W-BYLR227W-B VPS8P39702 1274 aa4.02□□□□□ -1.77
YLR227W-BYLR227W-B FMP10P40098 244 aa4.02□□□□□ -1.77
YLR227W-BYLR227W-B HXT17P53631 564 aa4.02□□□□□ -1.77
YLR227W-BYLR227W-B PCL8Q08966 492 aa4.02□□□□□ -1.77
YLR227W-BYLR227W-B MCM1P11746 286 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B PNT1P38969 423 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B VTC4P47075 721 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B RNT1Q02555 471 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B YPL260WQ08977 551 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B YLL066CQ99208 1374 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B NMD2P38798 1089 aaKnown RBP4.01□□□□□ -1.77
YLR227W-BYLR227W-B FYV10P40492 516 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B RPL40AP0CH08 128 aaKnown RBP4.01□□□□□ -1.77
YLR227W-BYLR227W-B RPL40BP0CH09 128 aaKnown RBP4.01□□□□□ -1.77
YLR227W-BYLR227W-B SDS3P40505 327 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B SUM1P46676 1062 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B UBP15P50101 1230 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B NUP84P52891 726 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B PUF6Q04373 656 aaKnown RBP4.01□□□□□ -1.77
YLR227W-BYLR227W-B PHR1P05066 565 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
YLR227W-BYLR227W-B PUP2P32379 260 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B DRE2P36152 348 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B SAK1P38990 1142 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B LSB6P42951 607 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B RSM7P47150 247 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B ULI1P43604 169 aa4.01□□□□□ -1.77
YLR227W-BYLR227W-B URK1P27515 501 aa4□□□□□ -1.77
YLR227W-BYLR227W-B YFR018CP43599 363 aa4□□□□□ -1.77
YLR227W-BYLR227W-B KIN4Q01919 800 aa4□□□□□ -1.77
YLR227W-BYLR227W-B ALE1Q08548 619 aa4□□□□□ -1.77
YLR227W-BYLR227W-B MSH2P25847 964 aa4□□□□□ -1.77
YLR227W-BYLR227W-B OPT2Q06593 877 aa4□□□□□ -1.77
YLR227W-BYLR227W-B CDA2Q06703 312 aa4□□□□□ -1.77
YLR227W-BYLR227W-B SFP1P32432 683 aa4□□□□□ -1.77
YLR227W-BYLR227W-B GIP1P38229 639 aa4□□□□□ -1.77
YLR227W-BYLR227W-B LAM5P43560 674 aa4□□□□□ -1.77
YLR227W-BYLR227W-B CCM1P48237 864 aaPredicted RBP4□□□□□ -1.77
YLR227W-BYLR227W-B YDR524C-BQ3E6R4 66 aa4□□□□□ -1.77
YLR227W-BYLR227W-B PDE1P22434 369 aa4□□□□□ -1.77
YLR227W-BYLR227W-B EPS1P40557 701 aa4□□□□□ -1.77
YLR227W-BYLR227W-B JJJ3P47138 172 aa4□□□□□ -1.77
YLR227W-BYLR227W-B YRB30P53107 440 aaPredicted RBP4□□□□□ -1.77
YLR227W-BYLR227W-B BRE5P53741 515 aaKnown RBP4□□□□□ -1.77
YLR227W-BYLR227W-B MRN1Q08925 612 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
YLR227W-BYLR227W-B CTF3Q12748 733 aa4□□□□□ -1.77
YLR227W-BYLR227W-B SSF1P38789 453 aaPredicted RBP3.99□□□□□ -1.77
YLR227W-BYLR227W-B CHS6P40955 746 aa3.99□□□□□ -1.77
YLR227W-BYLR227W-B PRY3P47033 881 aa3.99□□□□□ -1.77
YLR227W-BYLR227W-B ZPR1P53303 486 aaKnown RBP3.99□□□□□ -1.77
YLR227W-BYLR227W-B PRO2P54885 456 aaKnown RBP3.99□□□□□ -1.77
YLR227W-BYLR227W-B RIM20Q12033 661 aa3.99□□□□□ -1.77
YLR227W-BYLR227W-B YDR461C-AQ2V2P7 80 aa3.99□□□□□ -1.77
YLR227W-BYLR227W-B ERG6P25087 383 aaKnown RBP3.99□□□□□ -1.77
YLR227W-BYLR227W-B GAC1P28006 793 aa3.99□□□□□ -1.77
YLR227W-BYLR227W-B HOG1P32485 435 aa3.99□□□□□ -1.77
YLR227W-BYLR227W-B TFC3P34111 1160 aa3.99□□□□□ -1.77
YLR227W-BYLR227W-B BOI1P38041 980 aaKnown RBP3.99□□□□□ -1.77
YLR227W-BYLR227W-B NOC2P39744 710 aaKnown RBP3.99□□□□□ -1.77
YLR227W-BYLR227W-B SCD6P45978 349 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
YLR227W-BYLR227W-B HRD3Q05787 833 aa3.99□□□□□ -1.77
YLR227W-BYLR227W-B YPL272CQ08984 517 aa3.99□□□□□ -1.77
YLR227W-BYLR227W-B MEX67Q99257 599 aaKnown RBP3.99□□□□□ -1.77
YLR227W-BYLR227W-B TRF5P48561 642 aaKnown RBP3.99□□□□□ -1.77
YLR227W-BYLR227W-B LEE1Q02799 301 aaKnown RBP3.99□□□□□ -1.77
YLR227W-BYLR227W-B ISA1Q07821 250 aaPredicted RBP3.99□□□□□ -1.77
YLR227W-BYLR227W-B TIF1P10081 395 aaKnown RBP3.99□□□□□ -1.77
YLR227W-BYLR227W-B APM2P38700 605 aa3.99□□□□□ -1.77
YLR227W-BYLR227W-B TOF2Q02208 771 aa3.99□□□□□ -1.77
YLR227W-BYLR227W-B ARP9Q05123 467 aa3.99□□□□□ -1.77
YLR227W-BYLR227W-B CLC1P17891 233 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B CDC73Q06697 393 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B REH1Q06709 432 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B MPC54Q08550 464 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B NBL1Q3E7Y6 73 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B RTC1Q08281 1341 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B AI4P03878 556 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B KTR2P33550 425 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B YLR001CQ07895 862 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B NOC3Q07896 663 aaPredicted RBP3.98□□□□□ -1.77
YLR227W-BYLR227W-B RRD2Q12461 358 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B LDB19Q12502 818 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B HXT16P47185 567 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B GYL1Q04322 720 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B OPI10Q08202 246 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B PYC1P11154 1178 aaKnown RBP3.98□□□□□ -1.77
YLR227W-BYLR227W-B GDH3P39708 457 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B VPS25P47142 202 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B RPT4P53549 437 aaKnown RBP3.98□□□□□ -1.77
YLR227W-BYLR227W-B SFB2P53953 876 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B RSM10Q03201 203 aa3.98□□□□□ -1.77
YLR227W-BYLR227W-B RSF1Q05043 376 aa3.97□□□□□ -1.77
YLR227W-BYLR227W-B COX3P00420 269 aa3.97□□□□□ -1.77
YLR227W-BYLR227W-B MED6P38782 295 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms