RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C MED7Q08278 222 aa4.57□□□□□ -1.68
AFB1YLR040C CYC7P00045 113 aa4.56□□□□□ -1.68
AFB1YLR040C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68 RIP-Chip
AFB1YLR040C RET1P22276 1149 aaKnown RBP4.56□□□□□ -1.68
AFB1YLR040C SMY2P32909 740 aaKnown RBP4.56□□□□□ -1.68
AFB1YLR040C ADD66P36040 267 aa4.56□□□□□ -1.68
AFB1YLR040C NMD3P38861 518 aaKnown RBP4.56□□□□□ -1.68
AFB1YLR040C MMM1P41800 426 aa4.56□□□□□ -1.68
AFB1YLR040C INP52P50942 1183 aa4.56□□□□□ -1.68
AFB1YLR040C HDA2Q06629 674 aa4.56□□□□□ -1.68
AFB1YLR040C GCD1P09032 578 aaPredicted RBP4.55□□□□□ -1.68
AFB1YLR040C NNK1P36003 928 aa4.55□□□□□ -1.68
AFB1YLR040C OMA1P36163 345 aa4.55□□□□□ -1.68
AFB1YLR040C CTH1P47976 325 aa4.55□□□□□ -1.68
AFB1YLR040C RCM1P53972 490 aa4.55□□□□□ -1.68
AFB1YLR040C YLR257WQ06146 321 aaKnown RBP4.55□□□□□ -1.68
AFB1YLR040C DED1P06634 604 aaKnown RBP4.54□□□□□ -1.68
AFB1YLR040C AFG2P32794 780 aa4.54□□□□□ -1.68
AFB1YLR040C SEA4P38164 1038 aa4.54□□□□□ -1.68
AFB1YLR040C TOS1P38288 455 aa4.54□□□□□ -1.68
AFB1YLR040C HXT13P39924 564 aa4.54□□□□□ -1.68
AFB1YLR040C CIT3P43635 486 aa4.54□□□□□ -1.68
AFB1YLR040C GNP1P48813 663 aa4.54□□□□□ -1.68
AFB1YLR040C HXT17P53631 564 aa4.54□□□□□ -1.68
AFB1YLR040C HXT15P54854 567 aa4.54□□□□□ -1.68
AFB1YLR040C ROD1Q02805 837 aa4.54□□□□□ -1.68
AFB1YLR040C ESF1Q06344 628 aaKnown RBP4.54□□□□□ -1.68
AFB1YLR040C YVC1Q12324 675 aa4.54□□□□□ -1.68
AFB1YLR040C OYE3P41816 400 aaPredicted RBP4.53□□□□□ -1.68
AFB1YLR040C SDH1Q00711 640 aa4.53□□□□□ -1.68
AFB1YLR040C RSA3Q05942 220 aaKnown RBP4.53□□□□□ -1.68
AFB1YLR040C MRL1Q06815 381 aa4.53□□□□□ -1.68
AFB1YLR040C LAP2Q10740 671 aa4.53□□□□□ -1.68
AFB1YLR040C PUB1P32588 453 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69 RIP-Chip
AFB1YLR040C ATG14P38270 344 aa4.52□□□□□ -1.69
AFB1YLR040C QNS1P38795 714 aaKnown RBP4.52□□□□□ -1.69
AFB1YLR040C RAT1Q02792 1006 aaKnown RBP4.52□□□□□ -1.69
AFB1YLR040C RMD1Q03441 430 aa4.52□□□□□ -1.69
AFB1YLR040C TPP1Q03796 238 aa4.52□□□□□ -1.69
AFB1YLR040C RKM2Q03942 479 aa4.52□□□□□ -1.69
AFB1YLR040C PUS7Q08647 676 aaKnown RBP4.52□□□□□ -1.69
AFB1YLR040C TAF13P11747 167 aa4.51□□□□□ -1.69
AFB1YLR040C MAC1P35192 417 aa4.51□□□□□ -1.69
AFB1YLR040C PEX7P39108 375 aa4.51□□□□□ -1.69
AFB1YLR040C SIW14P53965 281 aa4.51□□□□□ -1.69
AFB1YLR040C MAG2Q06436 670 aaKnown RBP4.51□□□□□ -1.69
AFB1YLR040C BRE4Q07660 1125 aa4.51□□□□□ -1.69
AFB1YLR040C YOR059CQ08448 450 aaKnown RBP4.51□□□□□ -1.69
AFB1YLR040C MKK2P32491 506 aa4.5□□□□□ -1.69
AFB1YLR040C LIP5P32875 414 aa4.5□□□□□ -1.69
AFB1YLR040C DUT1P33317 147 aa4.5□□□□□ -1.69
AFB1YLR040C HSE1P38753 452 aa4.5□□□□□ -1.69
AFB1YLR040C NRD1P53617 575 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
AFB1YLR040C TRE1Q08919 783 aa4.5□□□□□ -1.69
AFB1YLR040C PTC5Q12511 572 aa4.5□□□□□ -1.69
AFB1YLR040C KIP1P28742 1111 aa4.49□□□□□ -1.69
AFB1YLR040C RER2P35196 286 aa4.49□□□□□ -1.69
AFB1YLR040C ALG3P38179 458 aa4.49□□□□□ -1.69
AFB1YLR040C YJL045WP47052 634 aa4.49□□□□□ -1.69
AFB1YLR040C VPS53P47061 822 aa4.49□□□□□ -1.69
AFB1YLR040C SSY1Q03770 852 aa4.49□□□□□ -1.69
AFB1YLR040C RTT10Q08924 1013 aa4.49□□□□□ -1.69
AFB1YLR040C SAM35P14693 329 aa4.48□□□□□ -1.69
AFB1YLR040C PET112P33893 541 aa4.48□□□□□ -1.69
AFB1YLR040C GPB2P39717 880 aa4.48□□□□□ -1.69
AFB1YLR040C CDC34P14682 295 aa4.47□□□□□ -1.69
AFB1YLR040C SYP1P25623 870 aaKnown RBP4.47□□□□□ -1.69
AFB1YLR040C RCL1Q08096 367 aaPredicted RBP4.47□□□□□ -1.69
AFB1YLR040C NSI1Q12457 570 aa4.47□□□□□ -1.69
AFB1YLR040C RAD27P26793 382 aa4.46□□□□□ -1.7
AFB1YLR040C MLS1P30952 554 aa4.46□□□□□ -1.7
AFB1YLR040C PRO1P32264 428 aa4.46□□□□□ -1.7
AFB1YLR040C YSC84P32793 468 aa4.46□□□□□ -1.7
AFB1YLR040C PTC7P38797 343 aa4.46□□□□□ -1.7
AFB1YLR040C GTS1P40956 396 aa4.46□□□□□ -1.7
AFB1YLR040C ENT3P47160 408 aa4.46□□□□□ -1.7
AFB1YLR040C EEB1Q02891 456 aa4.46□□□□□ -1.7
AFB1YLR040C HRK1Q08732 759 aaKnown RBP4.46□□□□□ -1.7
AFB1YLR040C ADP1P25371 1049 aa4.45□□□□□ -1.7
AFB1YLR040C MNR2P35724 969 aa4.45□□□□□ -1.7
AFB1YLR040C YHL012WP38709 493 aa4.45□□□□□ -1.7
AFB1YLR040C MET10P39692 1035 aa4.45□□□□□ -1.7
AFB1YLR040C TIF35Q04067 274 aaKnown RBP4.45□□□□□ -1.7
AFB1YLR040C JIP5Q06214 492 aaPredicted RBP4.45□□□□□ -1.7
AFB1YLR040C TMA46Q12000 345 aaKnown RBP4.45□□□□□ -1.7
AFB1YLR040C LPX1Q12405 387 aaKnown RBP4.45□□□□□ -1.7
AFB1YLR040C DBP5P20449 482 aaKnown RBP4.44□□□□□ -1.7
AFB1YLR040C HSP78P33416 811 aa4.44□□□□□ -1.7
AFB1YLR040C LRG1P35688 1017 aa4.44□□□□□ -1.7
AFB1YLR040C YFL054CP43549 646 aa4.44□□□□□ -1.7
AFB1YLR040C CNN1P43618 361 aa4.44□□□□□ -1.7
AFB1YLR040C SNU71P53207 620 aaKnown RBP4.44□□□□□ -1.7
AFB1YLR040C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
AFB1YLR040C SPO21Q12411 609 aa4.44□□□□□ -1.7
AFB1YLR040C YER152CP10356 443 aa4.43□□□□□ -1.7
AFB1YLR040C MDL2P33311 773 aa4.43□□□□□ -1.7
AFB1YLR040C PAM1P37304 830 aaKnown RBP4.43□□□□□ -1.7
AFB1YLR040C MPH1P40562 993 aa4.43□□□□□ -1.7
AFB1YLR040C FAA4P47912 694 aaKnown RBP4.43□□□□□ -1.7
AFB1YLR040C YGR053CP53234 283 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms