RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W ALA1P40825 983 aaKnown RBP5.34□□□□□ -1.55
SOF1YLL011W GPG1P53130 126 aa5.34□□□□□ -1.55
SOF1YLL011W YNL193WP53870 558 aa5.34□□□□□ -1.55
SOF1YLL011W MSH6Q03834 1242 aa5.34□□□□□ -1.55
SOF1YLL011W ENT2Q05785 613 aa5.34□□□□□ -1.55
SOF1YLL011W FAP7Q12055 197 aaPredicted RBP5.34□□□□□ -1.55
SOF1YLL011W YBR287WP38355 427 aa5.33□□□□□ -1.56
SOF1YLL011W COG6P53959 839 aa5.33□□□□□ -1.56
SOF1YLL011W PEX13P80667 386 aa5.33□□□□□ -1.56
SOF1YLL011W FRK1Q03002 865 aaPredicted RBP5.33□□□□□ -1.56
SOF1YLL011W GIR2Q03768 265 aaPredicted RBP5.33□□□□□ -1.56
SOF1YLL011W GIC2Q06648 383 aa5.33□□□□□ -1.56
SOF1YLL011W YOR296WQ08748 1289 aa5.33□□□□□ -1.56
SOF1YLL011W MPD2Q99316 277 aa5.33□□□□□ -1.56
SOF1YLL011W PRP9P19736 530 aaKnown RBP5.32□□□□□ -1.56
SOF1YLL011W NPR1P22211 790 aa5.32□□□□□ -1.56
SOF1YLL011W MEF1P25039 761 aa5.32□□□□□ -1.56
SOF1YLL011W PYC2P32327 1180 aaKnown RBP5.32□□□□□ -1.56
SOF1YLL011W KAP122P32767 1081 aa5.32□□□□□ -1.56
SOF1YLL011W SPT23P35210 1082 aa5.32□□□□□ -1.56
SOF1YLL011W YBL086CP38177 466 aa5.32□□□□□ -1.56
SOF1YLL011W HXT13P39924 564 aa5.32□□□□□ -1.56
SOF1YLL011W IES5P40060 125 aa5.32□□□□□ -1.56
SOF1YLL011W GPP1P41277 250 aaKnown RBP5.32□□□□□ -1.56
SOF1YLL011W YGL140CP53120 1219 aa5.32□□□□□ -1.56
SOF1YLL011W SDA1P53313 767 aaKnown RBP5.32□□□□□ -1.56
SOF1YLL011W HXT17P53631 564 aa5.32□□□□□ -1.56
SOF1YLL011W HXT15P54854 567 aa5.32□□□□□ -1.56
SOF1YLL011W TGL2P54857 326 aa5.32□□□□□ -1.56
SOF1YLL011W EMG1Q06287 252 aaKnown RBP5.32□□□□□ -1.56
SOF1YLL011W NCR1Q12200 1170 aa5.32□□□□□ -1.56
SOF1YLL011W YCF1P39109 1515 aaKnown RBP5.32□□□□□ -1.56
SOF1YLL011W INO1P11986 533 aa5.32□□□□□ -1.56
SOF1YLL011W SEC23P15303 768 aaKnown RBP5.32□□□□□ -1.56
SOF1YLL011W RPN12P32496 274 aa5.32□□□□□ -1.56
SOF1YLL011W MTC2P34246 357 aa5.32□□□□□ -1.56
SOF1YLL011W YBR071WP38243 211 aa5.32□□□□□ -1.56
SOF1YLL011W SAP30P38429 201 aa5.32□□□□□ -1.56
SOF1YLL011W DSS1P39112 969 aa5.32□□□□□ -1.56
SOF1YLL011W BDP1P46678 594 aa5.32□□□□□ -1.56
SOF1YLL011W PEX14P53112 341 aa5.32□□□□□ -1.56
SOF1YLL011W PMT7Q06644 662 aa5.32□□□□□ -1.56
SOF1YLL011W RPC31P17890 251 aa5.31□□□□□ -1.56
SOF1YLL011W EUG1P32474 517 aa5.31□□□□□ -1.56
SOF1YLL011W YKL222CP35995 705 aa5.31□□□□□ -1.56
SOF1YLL011W PEA2P40091 420 aa5.31□□□□□ -1.56
SOF1YLL011W MTR4P47047 1073 aaKnown RBP5.31□□□□□ -1.56
SOF1YLL011W YNL034WP53963 612 aa5.31□□□□□ -1.56
SOF1YLL011W SIW14P53965 281 aa5.31□□□□□ -1.56
SOF1YLL011W YNL018CP53976 612 aa5.31□□□□□ -1.56
SOF1YLL011W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
SOF1YLL011W SKI3P17883 1432 aaKnown RBP5.31□□□□□ -1.56
SOF1YLL011W HEM13P11353 328 aaKnown RBP5.3□□□□□ -1.56
SOF1YLL011W SST2P11972 698 aaKnown RBP5.3□□□□□ -1.56
SOF1YLL011W MKK2P32491 506 aa5.3□□□□□ -1.56
SOF1YLL011W MRT4P33201 236 aaKnown RBP5.3□□□□□ -1.56
SOF1YLL011W CCC2P38995 1004 aa5.3□□□□□ -1.56
SOF1YLL011W MBP1P39678 833 aa5.3□□□□□ -1.56
SOF1YLL011W POL5P39985 1022 aaKnown RBP5.3□□□□□ -1.56
SOF1YLL011W VID27P40157 782 aa5.3□□□□□ -1.56
SOF1YLL011W YTA6P40328 754 aa5.3□□□□□ -1.56
SOF1YLL011W ROD1Q02805 837 aa5.3□□□□□ -1.56
SOF1YLL011W YLR001CQ07895 862 aa5.3□□□□□ -1.56
SOF1YLL011W TOM70P07213 617 aaKnown RBP5.29□□□□□ -1.56
SOF1YLL011W TAF13P11747 167 aa5.29□□□□□ -1.56
SOF1YLL011W PGI1P12709 554 aaKnown RBP5.29□□□□□ -1.56
SOF1YLL011W TYS1P36421 394 aaKnown RBP5.29□□□□□ -1.56
SOF1YLL011W BAP2P38084 609 aa5.29□□□□□ -1.56
SOF1YLL011W APM2P38700 605 aa5.29□□□□□ -1.56
SOF1YLL011W SEC26P41810 973 aaKnown RBP5.29□□□□□ -1.56
SOF1YLL011W SAP155P43612 1002 aa5.29□□□□□ -1.56
SOF1YLL011W UBX4P54730 416 aa5.29□□□□□ -1.56
SOF1YLL011W HBN1Q96VH4 193 aa5.29□□□□□ -1.56
SOF1YLL011W SSK2P53599 1579 aa5.28□□□□□ -1.56
SOF1YLL011W RPS31P05759 152 aaKnown RBP5.28□□□□□ -1.56
SOF1YLL011W DED1P06634 604 aaKnown RBP5.28□□□□□ -1.56
SOF1YLL011W TOP3P13099 656 aa5.28□□□□□ -1.56
SOF1YLL011W MSH3P25336 1018 aa5.28□□□□□ -1.56
SOF1YLL011W PLC1P32383 869 aa5.28□□□□□ -1.56
SOF1YLL011W TFC4P33339 1025 aa5.28□□□□□ -1.56
SOF1YLL011W MFT1P33441 392 aaKnown RBP5.28□□□□□ -1.56
SOF1YLL011W SHM1P37292 490 aaPredicted RBP5.28□□□□□ -1.56
SOF1YLL011W AMN1P38285 549 aaPredicted RBP5.28□□□□□ -1.56
SOF1YLL011W JJJ2P46997 583 aa5.28□□□□□ -1.56
SOF1YLL011W GYP1Q08484 637 aa5.28□□□□□ -1.56
SOF1YLL011W TRE2Q08693 809 aa5.28□□□□□ -1.56
SOF1YLL011W MDM12Q92328 271 aa5.28□□□□□ -1.56
SOF1YLL011W TAF2P23255 1407 aa5.27□□□□□ -1.57
SOF1YLL011W VBA3P25594 458 aa5.27□□□□□ -1.57
SOF1YLL011W YKL107WP34251 309 aa5.27□□□□□ -1.57
SOF1YLL011W PAN5P38787 379 aa5.27□□□□□ -1.57
SOF1YLL011W SSN3P39073 555 aa5.27□□□□□ -1.57
SOF1YLL011W YGL176CP46945 554 aa5.27□□□□□ -1.57
SOF1YLL011W SPC105P53148 917 aa5.27□□□□□ -1.57
SOF1YLL011W NOG1Q02892 647 aaKnown RBP5.27□□□□□ -1.57
SOF1YLL011W YML082WQ04533 649 aaKnown RBP5.27□□□□□ -1.57
SOF1YLL011W CMR1Q12510 522 aaKnown RBP5.27□□□□□ -1.57
SOF1YLL011W SIN3P22579 1536 aa5.27□□□□□ -1.57
SOF1YLL011W PRP5P21372 849 aaPredicted RBP5.26□□□□□ -1.57
SOF1YLL011W HBS1P32769 611 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms