RNA–Protein interactions for RNA: YKR060W

UTP30, Transcript of Putative subunit of U3-containing 90S preribosome complex, yeast

Gene UTP30, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP30	YKR060W	LSO1	Q3E827	93 aa		4.27	□□□□□ -1.73
UTP30	YKR060W	CYC1	P00044	109 aa	Predicted RBP	4.26	□□□□□ -1.73
UTP30	YKR060W	SPS1	P08458	490 aa		4.26	□□□□□ -1.73
UTP30	YKR060W	SRO9	P25567	434 aa	Known RBP	4.26	□□□□□ -1.73
UTP30	YKR060W	PNP1	Q05788	311 aa		4.26	□□□□□ -1.73
UTP30	YKR060W	CDC20	P26309	610 aa		4.25	□□□□□ -1.73
UTP30	YKR060W	ECM2	P38241	364 aa	Known RBP	4.25	□□□□□ -1.73
UTP30	YKR060W	RSC58	Q07979	502 aa		4.25	□□□□□ -1.73
UTP30	YKR060W	STE11	P23561	717 aa		4.24	□□□□□ -1.73
UTP30	YKR060W	CPS1	P27614	576 aa		4.23	□□□□□ -1.73
UTP30	YKR060W	ATF1	P40353	525 aa		4.23	□□□□□ -1.73
UTP30	YKR060W	SAP155	P43612	1002 aa		4.23	□□□□□ -1.73
UTP30	YKR060W	ENV11	P53246	860 aa		4.23	□□□□□ -1.73
UTP30	YKR060W	YAR028W	P39548	234 aa		4.22	□□□□□ -1.73
UTP30	YKR060W	LGE1	Q02796	332 aa	Known RBP	4.22	□□□□□ -1.73
UTP30	YKR060W	MSS4	P38994	779 aa		4.21	□□□□□ -1.74
UTP30	YKR060W	PMA1	P05030	918 aa	Known RBP	4.2	□□□□□ -1.74
UTP30	YKR060W	HNT2	P49775	206 aa		4.2	□□□□□ -1.74
UTP30	YKR060W	YAF9	P53930	226 aa		4.2	□□□□□ -1.74
UTP30	YKR060W	RSC4	Q02206	625 aa		4.2	□□□□□ -1.74
UTP30	YKR060W	ACK1	Q07622	623 aa	Predicted RBP	4.2	□□□□□ -1.74
UTP30	YKR060W	DEF1	P35732	738 aa	Known RBP	4.19	□□□□□ -1.74
UTP30	YKR060W	MOH1	P38191	138 aa		4.19	□□□□□ -1.74
UTP30	YKR060W	NEM1	P38757	446 aa		4.19	□□□□□ -1.74
UTP30	YKR060W	YJL045W	P47052	634 aa		4.19	□□□□□ -1.74
UTP30	YKR060W	RSA3	Q05942	220 aa	Known RBP	4.19	□□□□□ -1.74
UTP30	YKR060W	URN1	Q06525	465 aa	Known RBP	4.19	□□□□□ -1.74
UTP30	YKR060W	RLF2	Q12495	606 aa		4.19	□□□□□ -1.74
UTP30	YKR060W	OAR1	P35731	278 aa		4.18	□□□□□ -1.74
UTP30	YKR060W	EXO5	P38289	585 aa		4.18	□□□□□ -1.74
UTP30	YKR060W	RCL1	Q08096	367 aa	Predicted RBP	4.18	□□□□□ -1.74
UTP30	YKR060W	HRK1	Q08732	759 aa	Known RBP	4.18	□□□□□ -1.74
UTP30	YKR060W	CDC6	P09119	513 aa		4.17	□□□□□ -1.74
UTP30	YKR060W	SSA4	P22202	642 aa	Known RBP	4.17	□□□□□ -1.74
UTP30	YKR060W	RXT3	Q07458	294 aa		4.17	□□□□□ -1.74
UTP30	YKR060W	SRM1	P21827	482 aa		4.15	□□□□□ -1.75
UTP30	YKR060W	YKL077W	P36081	392 aa		4.15	□□□□□ -1.75
UTP30	YKR060W	NUT1	P53114	1132 aa		4.15	□□□□□ -1.75
UTP30	YKR060W	NBA1	Q08229	501 aa	Known RBP	4.15	□□□□□ -1.75
UTP30	YKR060W	SPO21	Q12411	609 aa		4.15	□□□□□ -1.75
UTP30	YKR060W	GAL10	P04397	699 aa		4.14	□□□□□ -1.75
UTP30	YKR060W	MCM5	P29496	775 aa	Known RBP	4.14	□□□□□ -1.75
UTP30	YKR060W	DCG1	P32460	244 aa		4.14	□□□□□ -1.75
UTP30	YKR060W	YSC84	P32793	468 aa		4.14	□□□□□ -1.75
UTP30	YKR060W	UBA2	P52488	636 aa		4.14	□□□□□ -1.75
UTP30	YKR060W	PMT7	Q06644	662 aa		4.14	□□□□□ -1.75
UTP30	YKR060W	GPB1	Q08886	897 aa		4.14	□□□□□ -1.75
UTP30	YKR060W	SEC26	P41810	973 aa	Known RBP	4.13	□□□□□ -1.75
UTP30	YKR060W	YML083C	Q04526	418 aa		4.13	□□□□□ -1.75
UTP30	YKR060W	FLP1	P03870	423 aa		4.12	□□□□□ -1.75
UTP30	YKR060W	HSE1	P38753	452 aa		4.11	□□□□□ -1.75
UTP30	YKR060W	BOL3	P39724	118 aa		4.11	□□□□□ -1.75
UTP30	YKR060W	NOB1	Q08444	459 aa	Known RBP	4.11	□□□□□ -1.75
UTP30	YKR060W	CMP2	P14747	604 aa		4.1	□□□□□ -1.75
UTP30	YKR060W	YAP6	Q03935	383 aa		4.1	□□□□□ -1.75
UTP30	YKR060W	UTP5	Q04177	643 aa	Known RBP	4.1	□□□□□ -1.75
UTP30	YKR060W	YLR224W	Q05947	369 aa		4.1	□□□□□ -1.75
UTP30	YKR060W	SUB2	Q07478	446 aa	Known RBP	4.1	□□□□□ -1.75
UTP30	YKR060W	FUR4	P05316	633 aa	Known RBP	4.09	□□□□□ -1.75
UTP30	YKR060W	CUE2	P36075	443 aa	Known RBP	4.09	□□□□□ -1.75
UTP30	YKR060W	QNS1	P38795	714 aa	Known RBP	4.08	□□□□□ -1.76
UTP30	YKR060W	VPS62	P53285	467 aa		4.08	□□□□□ -1.76
UTP30	YKR060W	YNR063W	P53749	607 aa		4.08	□□□□□ -1.76
UTP30	YKR060W	LAP2	Q10740	671 aa		4.08	□□□□□ -1.76
UTP30	YKR060W	XKS1	P42826	600 aa		4.07	□□□□□ -1.76
UTP30	YKR060W	MTR4	P47047	1073 aa	Known RBP	4.07	□□□□□ -1.76
UTP30	YKR060W	MON1	P53129	644 aa		4.06	□□□□□ -1.76
UTP30	YKR060W	RVS167	P39743	482 aa	Known RBP	4.05	□□□□□ -1.76
UTP30	YKR060W	RPL34A	P87262	121 aa	Predicted RBP	4.05	□□□□□ -1.76
UTP30	YKR060W	TAF7	Q05021	590 aa		4.05	□□□□□ -1.76
UTP30	YKR060W	COQ4	O13525	335 aa		4.04	□□□□□ -1.76
UTP30	YKR060W	QRI1	P43123	477 aa	Known RBP	4.04	□□□□□ -1.76
UTP30	YKR060W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
UTP30	YKR060W	RSM24	Q03976	319 aa		4.04	□□□□□ -1.76
UTP30	YKR060W	RSB1	Q08417	382 aa		4.04	□□□□□ -1.76
UTP30	YKR060W	EMC1	P25574	760 aa		4.03	□□□□□ -1.76
UTP30	YKR060W	BAP2	P38084	609 aa		4.03	□□□□□ -1.76
UTP30	YKR060W	SIP5	P40210	489 aa	Known RBP	4.03	□□□□□ -1.76
UTP30	YKR060W	IOC3	P43596	787 aa		4.03	□□□□□ -1.76
UTP30	YKR060W	GCV2	P49095	1034 aa		4.03	□□□□□ -1.76
UTP30	YKR060W	GTF1	P53260	183 aa	Predicted RBP	4.03	□□□□□ -1.76
UTP30	YKR060W	PBP1	P53297	722 aa	Known RBP	4.03	□□□□□ -1.76
UTP30	YKR060W	CCZ1	P38273	704 aa		4.02	□□□□□ -1.77
UTP30	YKR060W	SHU2	P38957	223 aa		4.02	□□□□□ -1.77
UTP30	YKR060W	YNL011C	P53980	444 aa		4.02	□□□□□ -1.77
UTP30	YKR060W	UFD2	P54860	961 aa		4.02	□□□□□ -1.77
UTP30	YKR060W	BSC2	Q05611	235 aa		4.02	□□□□□ -1.77
UTP30	YKR060W	NOG1	Q02892	647 aa	Known RBP	4.01	□□□□□ -1.77
UTP30	YKR060W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
UTP30	YKR060W	HMI1	Q12039	706 aa		4.01	□□□□□ -1.77
UTP30	YKR060W	RIB2	Q12362	591 aa	Known RBP	4.01	□□□□□ -1.77
UTP30	YKR060W	SSA1	P10591	642 aa	Known RBP	4	□□□□□ -1.77
UTP30	YKR060W	HRR25	P29295	494 aa	Known RBP	4	□□□□□ -1.77
UTP30	YKR060W	TMN2	Q04562	672 aa		4	□□□□□ -1.77
UTP30	YKR060W	PLB1	P39105	664 aa		3.99	□□□□□ -1.77
UTP30	YKR060W	STU2	P46675	888 aa		3.99	□□□□□ -1.77
UTP30	YKR060W	INP54	Q08227	384 aa	Known RBP	3.99	□□□□□ -1.77
UTP30	YKR060W	MNL2	Q12205	849 aa		3.99	□□□□□ -1.77
UTP30	YKR060W	KIP1	P28742	1111 aa		3.98	□□□□□ -1.77
UTP30	YKR060W	PIK1	P39104	1066 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms