RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH1	YKL148C	RRP6	Q12149	733 aa	Known RBP	13.39	□□□□□ -0.27
SDH1	YKL148C	PSO2	P30620	661 aa		13.39	□□□□□ -0.27
SDH1	YKL148C	AIP1	P46680	615 aa	Known RBP	13.39	□□□□□ -0.27
SDH1	YKL148C	BOP3	P53958	396 aa		13.39	□□□□□ -0.27
SDH1	YKL148C	STI1	P15705	589 aa	Known RBP RIP-Chip data	13.38	□□□□□ -0.27	not detected
SDH1	YKL148C	MIP6	P38760	659 aa	Known RBP	13.38	□□□□□ -0.27
SDH1	YKL148C	MRS2	Q01926	470 aa		13.38	□□□□□ -0.27
SDH1	YKL148C	RPT6	Q01939	405 aa	Known RBP	13.38	□□□□□ -0.27
SDH1	YKL148C	SAS4	Q04003	481 aa		13.38	□□□□□ -0.27
SDH1	YKL148C	YLR287C	Q05881	355 aa		13.38	□□□□□ -0.27
SDH1	YKL148C	RIX7	Q07844	837 aa	Known RBP	13.38	□□□□□ -0.27
SDH1	YKL148C	YPL260W	Q08977	551 aa		13.38	□□□□□ -0.27
SDH1	YKL148C	CIT1	P00890	479 aa		13.37	□□□□□ -0.27
SDH1	YKL148C	MCX1	P38323	520 aa	Predicted RBP	13.37	□□□□□ -0.27
SDH1	YKL148C	VAC14	Q06708	880 aa		13.37	□□□□□ -0.27
SDH1	YKL148C	PSF3	Q12146	194 aa		13.37	□□□□□ -0.27
SDH1	YKL148C	MTF2	P10849	440 aa		13.37	□□□□□ -0.27
SDH1	YKL148C	RPO26	P20435	155 aa		13.37	□□□□□ -0.27
SDH1	YKL148C	MSH1	P25846	959 aa		13.37	□□□□□ -0.27
SDH1	YKL148C	SNF3	P10870	884 aa		13.36	□□□□□ -0.27
SDH1	YKL148C	CAF20	P12962	161 aa	Known RBP	13.36	□□□□□ -0.27
SDH1	YKL148C	CLB1	P24868	471 aa		13.36	□□□□□ -0.27
SDH1	YKL148C	VPS41	P38959	992 aa		13.36	□□□□□ -0.27
SDH1	YKL148C	SHQ1	P40486	507 aa	Predicted RBP	13.36	□□□□□ -0.27
SDH1	YKL148C	JJJ2	P46997	583 aa		13.36	□□□□□ -0.27
SDH1	YKL148C	ATG23	Q06671	453 aa		13.36	□□□□□ -0.27
SDH1	YKL148C	FLO1	P32768	1537 aa		13.36	□□□□□ -0.27
SDH1	YKL148C	HKR1	P41809	1802 aa		13.35	□□□□□ -0.27
SDH1	YKL148C	CLB5	P30283	435 aa		13.35	□□□□□ -0.27
SDH1	YKL148C	BUD16	P39988	312 aa		13.35	□□□□□ -0.27
SDH1	YKL148C	TRS120	Q04183	1289 aa		13.35	□□□□□ -0.27
SDH1	YKL148C	THR4	P16120	514 aa	Known RBP	13.35	□□□□□ -0.27
SDH1	YKL148C	BDF1	P35817	686 aa		13.35	□□□□□ -0.27
SDH1	YKL148C	STT3	P39007	718 aa	Known RBP	13.35	□□□□□ -0.27
SDH1	YKL148C	UTP5	Q04177	643 aa	Known RBP	13.35	□□□□□ -0.27
SDH1	YKL148C	GYL1	Q04322	720 aa		13.35	□□□□□ -0.27
SDH1	YKL148C	IRC3	Q06683	689 aa		13.35	□□□□□ -0.27
SDH1	YKL148C	SPO12	P17123	173 aa		13.34	□□□□□ -0.27
SDH1	YKL148C	EFM4	P40516	257 aa		13.34	□□□□□ -0.27
SDH1	YKL148C	HFM1	P51979	1187 aa		13.34	□□□□□ -0.27
SDH1	YKL148C	ERG7	P38604	731 aa		13.33	□□□□□ -0.28
SDH1	YKL148C	UBA2	P52488	636 aa		13.33	□□□□□ -0.28
SDH1	YKL148C	OSH2	Q12451	1283 aa		13.33	□□□□□ -0.28
SDH1	YKL148C	VPS8	P39702	1274 aa		13.33	□□□□□ -0.28
SDH1	YKL148C	VFA1	P40080	203 aa		13.33	□□□□□ -0.28
SDH1	YKL148C	YFR006W	P43590	535 aa		13.33	□□□□□ -0.28
SDH1	YKL148C	YGR153W	P48238	217 aa		13.33	□□□□□ -0.28
SDH1	YKL148C	HPC2	Q01448	625 aa		13.33	□□□□□ -0.28
SDH1	YKL148C	UME1	Q03010	460 aa		13.33	□□□□□ -0.28
SDH1	YKL148C	YAP7	Q08182	245 aa		13.33	□□□□□ -0.28
SDH1	YKL148C	YOL075C	Q08234	1294 aa		13.33	□□□□□ -0.28
SDH1	YKL148C	TUF1	P02992	437 aa	Known RBP	13.32	□□□□□ -0.28
SDH1	YKL148C	MAK11	P20484	414 aa	Known RBP	13.32	□□□□□ -0.28
SDH1	YKL148C	RPL8B	P29453	256 aa	Known RBP	13.32	□□□□□ -0.28
SDH1	YKL148C	RPC25	P35718	212 aa		13.32	□□□□□ -0.28
SDH1	YKL148C	TOM71	P38825	639 aa	Known RBP	13.32	□□□□□ -0.28
SDH1	YKL148C	TIF4632	P39936	914 aa	Known RBP	13.32	□□□□□ -0.28
SDH1	YKL148C	VTC2	P43585	828 aa		13.32	□□□□□ -0.28
SDH1	YKL148C	NEW1	Q08972	1196 aa	Known RBP	13.32	□□□□□ -0.28
SDH1	YKL148C	MYO1	P08964	1928 aa		13.31	□□□□□ -0.28
SDH1	YKL148C	RPG1	P38249	964 aa	Known RBP	13.31	□□□□□ -0.28
SDH1	YKL148C	SDA1	P53313	767 aa	Known RBP	13.31	□□□□□ -0.28
SDH1	YKL148C	NSG2	P53898	299 aa		13.31	□□□□□ -0.28
SDH1	YKL148C	RNT1	Q02555	471 aa		13.31	□□□□□ -0.28
SDH1	YKL148C	UBX2	Q04228	584 aa		13.31	□□□□□ -0.28
SDH1	YKL148C	SMD2	Q06217	110 aa	Known RBP	13.31	□□□□□ -0.28
SDH1	YKL148C	WRS1	Q12109	432 aa	Known RBP	13.31	□□□□□ -0.28
SDH1	YKL148C	RAD57	P25301	460 aa		13.31	□□□□□ -0.28
SDH1	YKL148C	BYE1	P36106	594 aa		13.31	□□□□□ -0.28
SDH1	YKL148C	SMF1	P38925	575 aa		13.31	□□□□□ -0.28
SDH1	YKL148C	YGL140C	P53120	1219 aa		13.31	□□□□□ -0.28
SDH1	YKL148C	RET3	P53600	189 aa		13.31	□□□□□ -0.28
SDH1	YKL148C	SLK19	Q08581	821 aa	Known RBP	13.31	□□□□□ -0.28
SDH1	YKL148C	SRB4	P32569	687 aa		13.3	□□□□□ -0.28
SDH1	YKL148C	YAP5	P40574	245 aa		13.3	□□□□□ -0.28
SDH1	YKL148C	LYS4	P49367	693 aa	Predicted RBP	13.3	□□□□□ -0.28
SDH1	YKL148C	PRP42	Q03776	544 aa	Known RBP	13.3	□□□□□ -0.28
SDH1	YKL148C	DSE3	Q08729	430 aa		13.3	□□□□□ -0.28
SDH1	YKL148C	CWC2	Q12046	339 aa	Predicted RBP	13.3	□□□□□ -0.28
SDH1	YKL148C	THI6	P41835	540 aa		13.29	□□□□□ -0.28
SDH1	YKL148C	SIT4	P20604	311 aa		13.29	□□□□□ -0.28
SDH1	YKL148C	UBP1	P25037	809 aa		13.29	□□□□□ -0.28
SDH1	YKL148C	TOS1	P38288	455 aa		13.29	□□□□□ -0.28
SDH1	YKL148C	GDT1	P38301	280 aa	Predicted RBP	13.29	□□□□□ -0.28
SDH1	YKL148C	CTK3	P46963	296 aa	Predicted RBP	13.29	□□□□□ -0.28
SDH1	YKL148C	FOB1	O13329	566 aa		13.28	□□□□□ -0.28
SDH1	YKL148C	SRP54	P20424	541 aa	Known RBP	13.28	□□□□□ -0.28
SDH1	YKL148C	MUD2	P36084	527 aa	Known RBP	13.28	□□□□□ -0.28
SDH1	YKL148C	CCT3	P39077	534 aa	Known RBP	13.28	□□□□□ -0.28
SDH1	YKL148C	HUL4	P40985	892 aa		13.28	□□□□□ -0.28
SDH1	YKL148C	OM45	P16547	393 aa		13.27	□□□□□ -0.28
SDH1	YKL148C	PDC6	P26263	563 aa	Known RBP	13.27	□□□□□ -0.28
SDH1	YKL148C	SAS3	P34218	831 aa		13.27	□□□□□ -0.28
SDH1	YKL148C	SAP1	P39955	897 aa	Known RBP	13.27	□□□□□ -0.28
SDH1	YKL148C	APL6	P46682	809 aa		13.27	□□□□□ -0.28
SDH1	YKL148C	SPO75	Q07798	868 aa		13.27	□□□□□ -0.28
SDH1	YKL148C	YPL216W	Q08964	1102 aa		13.27	□□□□□ -0.28
SDH1	YKL148C	KEL3	Q08979	651 aa	Predicted RBP	13.27	□□□□□ -0.28
SDH1	YKL148C	CLF1	Q12309	687 aa	Predicted RBP	13.27	□□□□□ -0.28
SDH1	YKL148C	TOM70	P07213	617 aa	Known RBP	13.27	□□□□□ -0.29

Retrieved 100 of 5,963 RNA–protein pairs in 151.7 ms