RNA–Protein interactions for RNA: YHR206W

SKN7, Transcript of Nuclear response regulator and transcription factor, yeast

Gene SKN7, Length 1,869 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKN7	YHR206W	ERP2	P39704	215 aa		4.18	□□□□□ -1.74
SKN7	YHR206W	SLS1	P42900	643 aa		4.18	□□□□□ -1.74
SKN7	YHR206W	YGR130C	P53278	816 aa		4.18	□□□□□ -1.74
SKN7	YHR206W	ULP1	Q02724	621 aa		4.18	□□□□□ -1.74
SKN7	YHR206W	DOT1	Q04089	582 aa	Known RBP	4.18	□□□□□ -1.74
SKN7	YHR206W	VMA4	P22203	233 aa	Known RBP	4.18	□□□□□ -1.74
SKN7	YHR206W	REI1	P38344	393 aa	Predicted RBP	4.18	□□□□□ -1.74
SKN7	YHR206W	NEM1	P38757	446 aa		4.18	□□□□□ -1.74
SKN7	YHR206W	MPP10	P47083	593 aa	Known RBP	4.18	□□□□□ -1.74
SKN7	YHR206W	INP52	P50942	1183 aa		4.18	□□□□□ -1.74
SKN7	YHR206W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SKN7	YHR206W	NOG1	Q02892	647 aa	Known RBP	4.18	□□□□□ -1.74
SKN7	YHR206W	TMA64	Q04600	565 aa	Known RBP	4.18	□□□□□ -1.74
SKN7	YHR206W	SVF1	Q05515	481 aa		4.18	□□□□□ -1.74
SKN7	YHR206W	GIC2	Q06648	383 aa		4.18	□□□□□ -1.74
SKN7	YHR206W	HXK1	P04806	485 aa	Known RBP	4.17	□□□□□ -1.74
SKN7	YHR206W	CHS2	P14180	963 aa		4.17	□□□□□ -1.74
SKN7	YHR206W	MSH3	P25336	1018 aa		4.17	□□□□□ -1.74
SKN7	YHR206W	RRP15	Q06511	250 aa	Predicted RBP	4.17	□□□□□ -1.74
SKN7	YHR206W	HEM13	P11353	328 aa	Known RBP	4.16	□□□□□ -1.74
SKN7	YHR206W	SEA4	P38164	1038 aa		4.16	□□□□□ -1.74
SKN7	YHR206W	ALG12	P53730	551 aa		4.16	□□□□□ -1.74
SKN7	YHR206W	PEX13	P80667	386 aa		4.16	□□□□□ -1.74
SKN7	YHR206W	ECM16	Q04217	1267 aa	Known RBP	4.16	□□□□□ -1.74
SKN7	YHR206W	WHI3	P34761	661 aa	Known RBP	4.15	□□□□□ -1.74
SKN7	YHR206W	NOC2	P39744	710 aa	Known RBP	4.15	□□□□□ -1.74
SKN7	YHR206W	CTH1	P47976	325 aa		4.15	□□□□□ -1.74
SKN7	YHR206W	YGR045C	P53229	120 aa		4.15	□□□□□ -1.74
SKN7	YHR206W	EAR1	Q03212	550 aa		4.15	□□□□□ -1.74
SKN7	YHR206W	OMA1	P36163	345 aa		4.15	□□□□□ -1.75
SKN7	YHR206W	MSH4	P40965	878 aa	Predicted RBP	4.15	□□□□□ -1.75
SKN7	YHR206W	NOP2	P40991	618 aa	Known RBP	4.15	□□□□□ -1.75
SKN7	YHR206W	SPO74	P45819	413 aa		4.15	□□□□□ -1.75
SKN7	YHR206W	POL32	P47110	350 aa		4.15	□□□□□ -1.75
SKN7	YHR206W	ELA1	P53861	379 aa	Predicted RBP	4.15	□□□□□ -1.75
SKN7	YHR206W	DNM1	P54861	757 aa		4.15	□□□□□ -1.75
SKN7	YHR206W	YPL109C	Q02981	657 aa		4.15	□□□□□ -1.75
SKN7	YHR206W	OYE2	Q03558	400 aa	Known RBP	4.15	□□□□□ -1.75
SKN7	YHR206W	CIT2	P08679	460 aa		4.14	□□□□□ -1.75
SKN7	YHR206W	YKL077W	P36081	392 aa		4.14	□□□□□ -1.75
SKN7	YHR206W	TOS1	P38288	455 aa		4.14	□□□□□ -1.75
SKN7	YHR206W	PIC2	P40035	300 aa		4.14	□□□□□ -1.75
SKN7	YHR206W	VPS27	P40343	622 aa	Known RBP	4.14	□□□□□ -1.75
SKN7	YHR206W	RSM26	P47141	266 aa		4.14	□□□□□ -1.75
SKN7	YHR206W	POB3	Q04636	552 aa	Known RBP	4.14	□□□□□ -1.75
SKN7	YHR206W	JIP5	Q06214	492 aa	Predicted RBP	4.14	□□□□□ -1.75
SKN7	YHR206W	MED7	Q08278	222 aa		4.14	□□□□□ -1.75
SKN7	YHR206W	OXR1	Q08952	273 aa		4.14	□□□□□ -1.75
SKN7	YHR206W	CYC7	P00045	113 aa		4.13	□□□□□ -1.75
SKN7	YHR206W	GCD1	P09032	578 aa	Predicted RBP	4.13	□□□□□ -1.75
SKN7	YHR206W	KAR1	P11927	433 aa		4.13	□□□□□ -1.75
SKN7	YHR206W	MCM2	P29469	868 aa		4.13	□□□□□ -1.75
SKN7	YHR206W	SRP40	P32583	406 aa	Predicted RBP	4.13	□□□□□ -1.75
SKN7	YHR206W	GRX4	P32642	244 aa		4.13	□□□□□ -1.75
SKN7	YHR206W	PEX28	P38848	579 aa		4.13	□□□□□ -1.75
SKN7	YHR206W	UTP5	Q04177	643 aa	Known RBP	4.13	□□□□□ -1.75
SKN7	YHR206W	MAG2	Q06436	670 aa	Known RBP	4.13	□□□□□ -1.75
SKN7	YHR206W	SSF2	Q12153	453 aa	Predicted RBP	4.13	□□□□□ -1.75
SKN7	YHR206W	YLL054C	Q12244	843 aa		4.13	□□□□□ -1.75
SKN7	YHR206W	DAL5	P15365	543 aa		4.13	□□□□□ -1.75
SKN7	YHR206W	YKL091C	P33324	310 aa	Known RBP	4.13	□□□□□ -1.75
SKN7	YHR206W	MAC1	P35192	417 aa		4.13	□□□□□ -1.75
SKN7	YHR206W	RDH54	P38086	958 aa		4.13	□□□□□ -1.75
SKN7	YHR206W	FYV10	P40492	516 aa		4.13	□□□□□ -1.75
SKN7	YHR206W	ALT1	P52893	592 aa		4.13	□□□□□ -1.75
SKN7	YHR206W	SDH1	Q00711	640 aa		4.13	□□□□□ -1.75
SKN7	YHR206W	ADI1	Q03677	179 aa		4.13	□□□□□ -1.75
SKN7	YHR206W	SPR28	Q04921	423 aa		4.13	□□□□□ -1.75
SKN7	YHR206W	KAR2	P16474	682 aa	Known RBP	4.12	□□□□□ -1.75
SKN7	YHR206W	MFT1	P33441	392 aa	Known RBP	4.12	□□□□□ -1.75
SKN7	YHR206W	ARL1	P38116	183 aa	Known RBP	4.12	□□□□□ -1.75
SKN7	YHR206W	MMM1	P41800	426 aa		4.12	□□□□□ -1.75
SKN7	YHR206W	YGL140C	P53120	1219 aa		4.12	□□□□□ -1.75
SKN7	YHR206W	COG4	Q06096	861 aa		4.12	□□□□□ -1.75
SKN7	YHR206W	RPS4A	P0CX35	261 aa	Known RBP	4.11	□□□□□ -1.75
SKN7	YHR206W	RPS4B	P0CX36	261 aa	Known RBP	4.11	□□□□□ -1.75
SKN7	YHR206W	TAF13	P11747	167 aa		4.11	□□□□□ -1.75
SKN7	YHR206W	MSB1	P21339	1137 aa	Known RBP	4.11	□□□□□ -1.75
SKN7	YHR206W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SKN7	YHR206W	SHU2	P38957	223 aa		4.11	□□□□□ -1.75
SKN7	YHR206W	RPS26A	P39938	119 aa	Known RBP	4.11	□□□□□ -1.75
SKN7	YHR206W	RPS26B	P39939	119 aa	Known RBP	4.11	□□□□□ -1.75
SKN7	YHR206W	XKS1	P42826	600 aa		4.11	□□□□□ -1.75
SKN7	YHR206W	IOC3	P43596	787 aa		4.11	□□□□□ -1.75
SKN7	YHR206W	YGR122W	P53272	402 aa		4.11	□□□□□ -1.75
SKN7	YHR206W	ENT2	Q05785	613 aa		4.11	□□□□□ -1.75
SKN7	YHR206W	NKP1	Q12493	238 aa		4.11	□□□□□ -1.75
SKN7	YHR206W	CYC8	P14922	966 aa		4.11	□□□□□ -1.75
SKN7	YHR206W	SQT1	P35184	431 aa		4.11	□□□□□ -1.75
SKN7	YHR206W	NMD3	P38861	518 aa	Known RBP	4.11	□□□□□ -1.75
SKN7	YHR206W	YJR107W	P47145	328 aa		4.11	□□□□□ -1.75
SKN7	YHR206W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	RIP-Chip
SKN7	YHR206W	CEF1	Q03654	590 aa	Predicted RBP	4.11	□□□□□ -1.75
SKN7	YHR206W	NSE3	Q05541	303 aa		4.11	□□□□□ -1.75
SKN7	YHR206W	BRE4	Q07660	1125 aa		4.11	□□□□□ -1.75
SKN7	YHR206W	NFS1	P25374	497 aa		4.1	□□□□□ -1.75
SKN7	YHR206W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	RIP-Chip
SKN7	YHR206W	SEC6	P32844	805 aa		4.1	□□□□□ -1.75
SKN7	YHR206W	GRX7	P38068	203 aa		4.1	□□□□□ -1.75
SKN7	YHR206W	VAC8	P39968	578 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms