RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeastyeast

Gene RTA1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTA1YGR213C NAM7P30771 971 aaKnown RBP5.82□□□□□ -1.48
RTA1YGR213C SAF1P38352 637 aa5.82□□□□□ -1.48
RTA1YGR213C MSH4P40965 878 aaPredicted RBP5.82□□□□□ -1.48
RTA1YGR213C LSB3P43603 459 aaKnown RBP5.82□□□□□ -1.48
RTA1YGR213C ROD1Q02805 837 aa5.82□□□□□ -1.48
RTA1YGR213C VPS16Q03308 798 aa5.82□□□□□ -1.48
RTA1YGR213C GIC2Q06648 383 aa5.82□□□□□ -1.48
RTA1YGR213C PIN2Q12057 282 aa5.82□□□□□ -1.48
RTA1YGR213C CLN2P20438 545 aa5.81□□□□□ -1.48
RTA1YGR213C SMY2P32909 740 aaKnown RBP5.81□□□□□ -1.48
RTA1YGR213C AKR1P39010 764 aa5.81□□□□□ -1.48
RTA1YGR213C MET10P39692 1035 aa5.81□□□□□ -1.48
RTA1YGR213C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48 RIP-Chip
RTA1YGR213C LAP2Q10740 671 aa5.81□□□□□ -1.48
RTA1YGR213C COQ2P32378 372 aa5.8□□□□□ -1.48
RTA1YGR213C AFG2P32794 780 aa5.8□□□□□ -1.48
RTA1YGR213C NNK1P36003 928 aa5.8□□□□□ -1.48
RTA1YGR213C ATG14P38270 344 aa5.8□□□□□ -1.48
RTA1YGR213C ALT1P52893 592 aa5.8□□□□□ -1.48
RTA1YGR213C TMA46Q12000 345 aaKnown RBP5.8□□□□□ -1.48
RTA1YGR213C DED1P06634 604 aaKnown RBP5.79□□□□□ -1.48
RTA1YGR213C RAD27P26793 382 aa5.79□□□□□ -1.48
RTA1YGR213C MKK2P32491 506 aa5.79□□□□□ -1.48
RTA1YGR213C HSE1P38753 452 aa5.79□□□□□ -1.48
RTA1YGR213C MAD1P40957 749 aa5.79□□□□□ -1.48
RTA1YGR213C YNR063WP53749 607 aa5.79□□□□□ -1.48
RTA1YGR213C YLR122CQ12312 125 aa5.79□□□□□ -1.48
RTA1YGR213C RPS4AP0CX35 261 aaKnown RBP5.78□□□□□ -1.48
RTA1YGR213C RPS4BP0CX36 261 aaKnown RBP5.78□□□□□ -1.48
RTA1YGR213C RET1P22276 1149 aaKnown RBP5.78□□□□□ -1.48
RTA1YGR213C NFS1P25374 497 aa5.78□□□□□ -1.48
RTA1YGR213C RSA3Q05942 220 aaKnown RBP5.78□□□□□ -1.48
RTA1YGR213C MAG2Q06436 670 aaKnown RBP5.78□□□□□ -1.48
RTA1YGR213C RER2P35196 286 aa5.77□□□□□ -1.49
RTA1YGR213C QNS1P38795 714 aaKnown RBP5.77□□□□□ -1.49
RTA1YGR213C VPS53P47061 822 aa5.77□□□□□ -1.49
RTA1YGR213C YGR053CP53234 283 aa5.77□□□□□ -1.49
RTA1YGR213C RAT1Q02792 1006 aaKnown RBP5.77□□□□□ -1.49
RTA1YGR213C EEB1Q02891 456 aa5.77□□□□□ -1.49
RTA1YGR213C YLR257WQ06146 321 aaKnown RBP5.77□□□□□ -1.49
RTA1YGR213C SYP1P25623 870 aaKnown RBP5.76□□□□□ -1.49
RTA1YGR213C KAE1P36132 386 aa5.76□□□□□ -1.49
RTA1YGR213C MMM1P41800 426 aa5.76□□□□□ -1.49
RTA1YGR213C EAR1Q03212 550 aa5.76□□□□□ -1.49
RTA1YGR213C CHS2P14180 963 aa5.75□□□□□ -1.49
RTA1YGR213C MSB1P21339 1137 aaKnown RBP5.75□□□□□ -1.49
RTA1YGR213C ALG3P38179 458 aa5.75□□□□□ -1.49
RTA1YGR213C FAA4P47912 694 aaKnown RBP5.75□□□□□ -1.49
RTA1YGR213C GDE1Q02979 1223 aa5.75□□□□□ -1.49
RTA1YGR213C PTC5Q12511 572 aa5.75□□□□□ -1.49
RTA1YGR213C TRP2P00899 507 aaKnown RBP5.74□□□□□ -1.49
RTA1YGR213C DBP5P20449 482 aaKnown RBP5.74□□□□□ -1.49
RTA1YGR213C LYP1P32487 611 aa5.74□□□□□ -1.49
RTA1YGR213C WHI3P34761 661 aaKnown RBP5.74□□□□□ -1.49
RTA1YGR213C CNN1P43618 361 aa5.74□□□□□ -1.49
RTA1YGR213C CIT3P43635 486 aa5.74□□□□□ -1.49
RTA1YGR213C ALD6P54115 500 aaKnown RBP5.74□□□□□ -1.49
RTA1YGR213C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
RTA1YGR213C YOR059CQ08448 450 aaKnown RBP5.74□□□□□ -1.49
RTA1YGR213C PUS7Q08647 676 aaKnown RBP5.74□□□□□ -1.49
RTA1YGR213C VAC8P39968 578 aa5.73□□□□□ -1.49
RTA1YGR213C CWC24P53769 259 aa5.73□□□□□ -1.49
RTA1YGR213C TPP1Q03796 238 aa5.73□□□□□ -1.49
RTA1YGR213C TIF35Q04067 274 aaKnown RBP5.73□□□□□ -1.49
RTA1YGR213C HRK1Q08732 759 aaKnown RBP5.73□□□□□ -1.49
RTA1YGR213C KIP1P28742 1111 aa5.72□□□□□ -1.49
RTA1YGR213C RGD1P38339 666 aa5.72□□□□□ -1.49
RTA1YGR213C TYW3P53177 273 aa5.72□□□□□ -1.49
RTA1YGR213C YVC1Q12324 675 aa5.72□□□□□ -1.49
RTA1YGR213C NMD3P38861 518 aaKnown RBP5.71□□□□□ -1.5
RTA1YGR213C MPH1P40562 993 aa5.71□□□□□ -1.5
RTA1YGR213C OYE3P41816 400 aaPredicted RBP5.71□□□□□ -1.5
RTA1YGR213C YJL045WP47052 634 aa5.71□□□□□ -1.5
RTA1YGR213C YGR130CP53278 816 aa5.71□□□□□ -1.5
RTA1YGR213C RCM1P53972 490 aa5.71□□□□□ -1.5
RTA1YGR213C YPL260WQ08977 551 aa5.71□□□□□ -1.5
RTA1YGR213C TRP3P00937 484 aa5.7□□□□□ -1.5
RTA1YGR213C MLS1P30952 554 aa5.7□□□□□ -1.5
RTA1YGR213C HNT2P49775 206 aa5.7□□□□□ -1.5
RTA1YGR213C AOS1Q06624 347 aa5.7□□□□□ -1.5
RTA1YGR213C SPO20Q04359 397 aa5.69□□□□□ -1.5
RTA1YGR213C OPI10Q08202 246 aa5.69□□□□□ -1.5
RTA1YGR213C MED7Q08278 222 aa5.69□□□□□ -1.5
RTA1YGR213C SPO21Q12411 609 aa5.69□□□□□ -1.5
RTA1YGR213C CYC7P00045 113 aa5.68□□□□□ -1.5
RTA1YGR213C INO1P11986 533 aa5.68□□□□□ -1.5
RTA1YGR213C YSC84P32793 468 aa5.68□□□□□ -1.5
RTA1YGR213C YKR073CP36153 106 aa5.68□□□□□ -1.5
RTA1YGR213C GPB2P39717 880 aa5.68□□□□□ -1.5
RTA1YGR213C SAM35P14693 329 aa5.67□□□□□ -1.5
RTA1YGR213C BAS1P22035 811 aa5.67□□□□□ -1.5
RTA1YGR213C PUF4P25339 888 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
RTA1YGR213C MOT2P34909 587 aaKnown RBP5.67□□□□□ -1.5
RTA1YGR213C MCM7P38132 845 aa5.67□□□□□ -1.5
RTA1YGR213C PEX7P39108 375 aa5.67□□□□□ -1.5
RTA1YGR213C RPN3P40016 523 aaKnown RBP5.67□□□□□ -1.5
RTA1YGR213C TRE1Q08919 783 aa5.67□□□□□ -1.5
RTA1YGR213C FAL1Q12099 399 aaKnown RBP5.67□□□□□ -1.5
RTA1YGR213C SSF2Q12153 453 aaPredicted RBP5.67□□□□□ -1.5
RTA1YGR213C NSI1Q12457 570 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms