RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W IRC8P47046 822 aa6.09□□□□□ -1.43
CDC43YGL155W SSL2Q00578 843 aa6.09□□□□□ -1.43
CDC43YGL155W FOX2Q02207 900 aaKnown RBP6.09□□□□□ -1.43
CDC43YGL155W ECM23Q02710 187 aa6.09□□□□□ -1.43
CDC43YGL155W VPS60Q03390 229 aa6.09□□□□□ -1.43
CDC43YGL155W EST2Q06163 884 aa6.09□□□□□ -1.43
CDC43YGL155W NYV1Q12255 253 aa6.09□□□□□ -1.43
CDC43YGL155W HXK1P04806 485 aaKnown RBP6.08□□□□□ -1.44
CDC43YGL155W SSA2P10592 639 aaKnown RBP6.08□□□□□ -1.44
CDC43YGL155W LTV1P34078 463 aa6.08□□□□□ -1.44
CDC43YGL155W YKR075CP36155 307 aa6.08□□□□□ -1.44
CDC43YGL155W NOC2P39744 710 aaKnown RBP6.08□□□□□ -1.44
CDC43YGL155W YMR147WP40218 223 aaKnown RBP6.08□□□□□ -1.44
CDC43YGL155W APP1P53933 587 aa6.08□□□□□ -1.44
CDC43YGL155W ALD3P54114 506 aa6.08□□□□□ -1.44
CDC43YGL155W VMS1Q04311 632 aaKnown RBP6.08□□□□□ -1.44
CDC43YGL155W DIB1Q06819 143 aaPredicted RBP6.08□□□□□ -1.44
CDC43YGL155W RGP1P16664 663 aa6.07□□□□□ -1.44
CDC43YGL155W ASF1P32447 279 aa6.07□□□□□ -1.44
CDC43YGL155W BMH2P34730 273 aaKnown RBP6.07□□□□□ -1.44
CDC43YGL155W RER2P35196 286 aa6.07□□□□□ -1.44
CDC43YGL155W MNR2P35724 969 aa6.07□□□□□ -1.44
CDC43YGL155W HAL5P38970 855 aaKnown RBP6.07□□□□□ -1.44
CDC43YGL155W IOC3P43596 787 aa6.07□□□□□ -1.44
CDC43YGL155W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
CDC43YGL155W RPA14P50106 137 aa6.07□□□□□ -1.44
CDC43YGL155W TBF1Q02457 562 aa6.07□□□□□ -1.44
CDC43YGL155W RAT1Q02792 1006 aaKnown RBP6.07□□□□□ -1.44
CDC43YGL155W KAR5Q04746 504 aa6.07□□□□□ -1.44
CDC43YGL155W PUS5Q06244 254 aa6.07□□□□□ -1.44
CDC43YGL155W YCG1Q06680 1035 aa6.07□□□□□ -1.44
CDC43YGL155W YPR097WQ06839 1073 aa6.07□□□□□ -1.44
CDC43YGL155W RAD59Q12223 238 aa6.07□□□□□ -1.44
CDC43YGL155W FAS2P19097 1887 aaKnown RBP6.07□□□□□ -1.44
CDC43YGL155W CYB2P00175 591 aa6.06□□□□□ -1.44
CDC43YGL155W MET22P32179 357 aa6.06□□□□□ -1.44
CDC43YGL155W NGR1P32831 672 aaKnown RBP6.06□□□□□ -1.44
CDC43YGL155W RRD1P40454 393 aaKnown RBP6.06□□□□□ -1.44
CDC43YGL155W EPL1P43572 832 aa6.06□□□□□ -1.44
CDC43YGL155W KXD1P53158 218 aa6.06□□□□□ -1.44
CDC43YGL155W WAR1Q03631 944 aa6.06□□□□□ -1.44
CDC43YGL155W HCR1Q05775 265 aaKnown RBP6.06□□□□□ -1.44
CDC43YGL155W PET111P08468 800 aa6.05□□□□□ -1.44
CDC43YGL155W HCA4P20448 770 aaKnown RBP6.05□□□□□ -1.44
CDC43YGL155W MRC1P25588 1096 aa6.05□□□□□ -1.44
CDC43YGL155W SAP190P36123 1033 aa6.05□□□□□ -1.44
CDC43YGL155W GLO3P38682 493 aaKnown RBP6.05□□□□□ -1.44
CDC43YGL155W RPN10P38886 268 aaKnown RBP6.05□□□□□ -1.44
CDC43YGL155W ALG2P43636 503 aa6.05□□□□□ -1.44
CDC43YGL155W CTH1P47976 325 aa6.05□□□□□ -1.44
CDC43YGL155W PPM2Q08282 695 aa6.05□□□□□ -1.44
CDC43YGL155W NBL1Q3E7Y6 73 aa6.05□□□□□ -1.44
CDC43YGL155W SRP40P32583 406 aaPredicted RBP6.04□□□□□ -1.44
CDC43YGL155W SAC6P32599 642 aaKnown RBP6.04□□□□□ -1.44
CDC43YGL155W CIN4P39110 191 aa6.04□□□□□ -1.44
CDC43YGL155W FYV10P40492 516 aa6.04□□□□□ -1.44
CDC43YGL155W CUE3P53137 624 aaKnown RBP6.04□□□□□ -1.44
CDC43YGL155W VPS75P53853 264 aa6.04□□□□□ -1.44
CDC43YGL155W GFD1Q04839 188 aaKnown RBP6.04□□□□□ -1.44
CDC43YGL155W ALR1Q08269 859 aa6.04□□□□□ -1.44
CDC43YGL155W DPH6Q12429 685 aa6.04□□□□□ -1.44
CDC43YGL155W CEX1Q12453 761 aa6.04□□□□□ -1.44
CDC43YGL155W SWI4P25302 1093 aaKnown RBP6.03□□□□□ -1.44
CDC43YGL155W BMH1P29311 267 aaKnown RBP6.03□□□□□ -1.44
CDC43YGL155W ADE17P38009 592 aaKnown RBP6.03□□□□□ -1.44
CDC43YGL155W MAL31P38156 614 aa6.03□□□□□ -1.44
CDC43YGL155W AKR1P39010 764 aa6.03□□□□□ -1.44
CDC43YGL155W UFD2P54860 961 aa6.03□□□□□ -1.44
CDC43YGL155W RPS15Q01855 142 aaKnown RBP6.03□□□□□ -1.44
CDC43YGL155W GDE1Q02979 1223 aa6.03□□□□□ -1.44
CDC43YGL155W COG4Q06096 861 aa6.03□□□□□ -1.44
CDC43YGL155W THI3Q07471 609 aa6.03□□□□□ -1.44
CDC43YGL155W BUG1Q12191 341 aa6.03□□□□□ -1.44
CDC43YGL155W COQ1P18900 473 aa6.02□□□□□ -1.45
CDC43YGL155W MCM3P24279 971 aaKnown RBP6.02□□□□□ -1.45
CDC43YGL155W MGM1P32266 881 aa6.02□□□□□ -1.45
CDC43YGL155W BOI1P38041 980 aaKnown RBP6.02□□□□□ -1.45
CDC43YGL155W CAJ1P39101 391 aa6.02□□□□□ -1.45
CDC43YGL155W RTC4P53850 401 aa6.02□□□□□ -1.45
CDC43YGL155W HPC2Q01448 625 aa6.02□□□□□ -1.45
CDC43YGL155W SYF1Q04048 859 aaPredicted RBP6.02□□□□□ -1.45
CDC43YGL155W INM2Q05533 292 aa6.02□□□□□ -1.45
CDC43YGL155W MRD1Q06106 887 aaKnown RBP6.02□□□□□ -1.45
CDC43YGL155W DCS2Q12123 353 aa6.02□□□□□ -1.45
CDC43YGL155W PSF3Q12146 194 aa6.02□□□□□ -1.45
CDC43YGL155W GET3Q12154 354 aaKnown RBP6.02□□□□□ -1.45
CDC43YGL155W PET123P17558 318 aa6.01□□□□□ -1.45
CDC43YGL155W MCM4P30665 933 aaKnown RBP6.01□□□□□ -1.45
CDC43YGL155W RRP1P35178 278 aaPredicted RBP6.01□□□□□ -1.45
CDC43YGL155W GRX7P38068 203 aa6.01□□□□□ -1.45
CDC43YGL155W ICP55P40051 511 aa6.01□□□□□ -1.45
CDC43YGL155W FYV8P46949 817 aaKnown RBP6.01□□□□□ -1.45
CDC43YGL155W ALF1P53904 254 aa6.01□□□□□ -1.45
CDC43YGL155W TFB3Q03290 321 aa6.01□□□□□ -1.45
CDC43YGL155W GIN4Q12263 1142 aa6.01□□□□□ -1.45
CDC43YGL155W PHO13P19881 312 aa6□□□□□ -1.45
CDC43YGL155W MSH3P25336 1018 aa6□□□□□ -1.45
CDC43YGL155W CDC15P27636 974 aa6□□□□□ -1.45
CDC43YGL155W URA1P28272 314 aaPredicted RBP6□□□□□ -1.45
CDC43YGL155W ANP1P32629 500 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms