RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W EEB1Q02891 456 aa2.02□□□□□ -2.09
SMC1YFL008W SPR28Q04921 423 aa2.02□□□□□ -2.09
SMC1YFL008W STU1P38198 1513 aa2.01□□□□□ -2.09
SMC1YFL008W SFA1P32771 386 aa2.01□□□□□ -2.09
SMC1YFL008W SMC1P32908 1225 aa2.01□□□□□ -2.09
SMC1YFL008W TED1P40533 473 aa2.01□□□□□ -2.09
SMC1YFL008W YGR053CP53234 283 aa2.01□□□□□ -2.09
SMC1YFL008W GCN2P15442 1659 aa2.01□□□□□ -2.09
SMC1YFL008W SAM35P14693 329 aa2.01□□□□□ -2.09
SMC1YFL008W MCM5P29496 775 aaKnown RBP2.01□□□□□ -2.09
SMC1YFL008W BAP2P38084 609 aa2.01□□□□□ -2.09
SMC1YFL008W BOI2P39969 1040 aa2.01□□□□□ -2.09
SMC1YFL008W ARI1P53111 347 aaKnown RBP2.01□□□□□ -2.09
SMC1YFL008W YGR122WP53272 402 aa2.01□□□□□ -2.09
SMC1YFL008W RRN6P32786 894 aa2.01□□□□□ -2.09
SMC1YFL008W HDA2Q06629 674 aa2.01□□□□□ -2.09
SMC1YFL008W SMC4Q12267 1418 aa2.01□□□□□ -2.09
SMC1YFL008W NUP188P52593 1655 aaKnown RBP2□□□□□ -2.09
SMC1YFL008W MYO4P32492 1471 aa2□□□□□ -2.09
SMC1YFL008W SLS1P42900 643 aa2□□□□□ -2.09
SMC1YFL008W ALO1P54783 526 aaKnown RBP2□□□□□ -2.09
SMC1YFL008W ORC3P54790 616 aa2□□□□□ -2.09
SMC1YFL008W RIB2Q12362 591 aaKnown RBP2□□□□□ -2.09
SMC1YFL008W YKR073CP36153 106 aa2□□□□□ -2.09
SMC1YFL008W ALT1P52893 592 aa2□□□□□ -2.09
SMC1YFL008W UTP5Q04177 643 aaKnown RBP2□□□□□ -2.09
SMC1YFL008W TRP3P00937 484 aa1.99□□□□□ -2.09
SMC1YFL008W PUF4P25339 888 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
SMC1YFL008W PRP40P33203 583 aaKnown RBP1.99□□□□□ -2.09
SMC1YFL008W AFR1P33304 620 aa1.99□□□□□ -2.09
SMC1YFL008W VPS35P34110 944 aa1.99□□□□□ -2.09
SMC1YFL008W TAT1P38085 619 aa1.99□□□□□ -2.09
SMC1YFL008W CWH41P53008 833 aa1.99□□□□□ -2.09
SMC1YFL008W MTC3P53077 123 aa1.99□□□□□ -2.09
SMC1YFL008W SRM1P21827 482 aa1.99□□□□□ -2.09
SMC1YFL008W THI80P35202 319 aa1.99□□□□□ -2.09
SMC1YFL008W PEX7P39108 375 aa1.99□□□□□ -2.09
SMC1YFL008W NHA1Q99271 985 aa1.99□□□□□ -2.09
SMC1YFL008W RPP1AP05318 106 aaPredicted RBP1.99□□□□□ -2.09
SMC1YFL008W GCR1P07261 785 aa1.99□□□□□ -2.09
SMC1YFL008W MCM2P29469 868 aa1.99□□□□□ -2.09
SMC1YFL008W RRM3P38766 723 aa1.99□□□□□ -2.09
SMC1YFL008W MET10P39692 1035 aa1.99□□□□□ -2.09
SMC1YFL008W OYE3P41816 400 aaPredicted RBP1.99□□□□□ -2.09
SMC1YFL008W YFL054CP43549 646 aa1.99□□□□□ -2.09
SMC1YFL008W SOK2P53438 785 aaPredicted RBP1.99□□□□□ -2.09
SMC1YFL008W BUL2Q03758 920 aaKnown RBP1.99□□□□□ -2.09
SMC1YFL008W YCS4Q06156 1176 aa1.99□□□□□ -2.09
SMC1YFL008W YLR122CQ12312 125 aa1.99□□□□□ -2.09
SMC1YFL008W RAD2P07276 1031 aa1.98□□□□□ -2.09
SMC1YFL008W DBP2P24783 546 aaKnown RBP1.98□□□□□ -2.09
SMC1YFL008W MSH3P25336 1018 aa1.98□□□□□ -2.09
SMC1YFL008W YKL151CP36059 337 aa1.98□□□□□ -2.09
SMC1YFL008W STM1P39015 273 aaKnown RBP1.98□□□□□ -2.09
SMC1YFL008W ADI1Q03677 179 aa1.98□□□□□ -2.09
SMC1YFL008W TOP2P06786 1428 aaKnown RBP1.98□□□□□ -2.09
SMC1YFL008W TY1B-NL2Q99337 1749 aaKnown RBP1.98□□□□□ -2.09
SMC1YFL008W PRE9P23638 258 aaKnown RBP1.98□□□□□ -2.09
SMC1YFL008W NAM7P30771 971 aaKnown RBP1.98□□□□□ -2.09
SMC1YFL008W SEC8P32855 1065 aa1.98□□□□□ -2.09
SMC1YFL008W RVS167P39743 482 aaKnown RBP1.98□□□□□ -2.09
SMC1YFL008W THI12P42883 340 aa1.98□□□□□ -2.09
SMC1YFL008W THI5P43534 340 aa1.98□□□□□ -2.09
SMC1YFL008W THI11P47183 340 aa1.98□□□□□ -2.09
SMC1YFL008W GCV1P48015 400 aa1.98□□□□□ -2.09
SMC1YFL008W THI13Q07748 340 aa1.98□□□□□ -2.09
SMC1YFL008W LPX1Q12405 387 aaKnown RBP1.98□□□□□ -2.09
SMC1YFL008W CDC6P09119 513 aa1.98□□□□□ -2.09
SMC1YFL008W RPT1P33299 467 aaKnown RBP1.98□□□□□ -2.09
SMC1YFL008W ALG14P38242 237 aa1.98□□□□□ -2.09
SMC1YFL008W MPH1P40562 993 aa1.98□□□□□ -2.09
SMC1YFL008W MEC3Q02574 474 aa1.98□□□□□ -2.09
SMC1YFL008W GCD1P09032 578 aaPredicted RBP1.97□□□□□ -2.09
SMC1YFL008W SAC7P17121 654 aa1.97□□□□□ -2.09
SMC1YFL008W SNF5P18480 905 aa1.97□□□□□ -2.09
SMC1YFL008W RPL34AP87262 121 aaPredicted RBP1.97□□□□□ -2.09
SMC1YFL008W YPL034WQ03083 165 aa1.97□□□□□ -2.09
SMC1YFL008W SIP5P40210 489 aaKnown RBP1.97□□□□□ -2.09
SMC1YFL008W LEM3P42838 414 aa1.97□□□□□ -2.09
SMC1YFL008W YJL181WP46987 611 aa1.97□□□□□ -2.09
SMC1YFL008W NUP192P47054 1683 aa1.97□□□□□ -2.09
SMC1YFL008W STE5P32917 917 aa1.97□□□□□ -2.09
SMC1YFL008W ELG1Q12050 791 aa1.97□□□□□ -2.09
SMC1YFL008W VMA4P22203 233 aaKnown RBP1.96□□□□□ -2.1
SMC1YFL008W MKK2P32491 506 aa1.96□□□□□ -2.1
SMC1YFL008W YKL069WP36088 180 aa1.96□□□□□ -2.1
SMC1YFL008W OMA1P36163 345 aa1.96□□□□□ -2.1
SMC1YFL008W UGA2P38067 497 aa1.96□□□□□ -2.1
SMC1YFL008W MSH4P40965 878 aaPredicted RBP1.96□□□□□ -2.1
SMC1YFL008W YGR045CP53229 120 aa1.96□□□□□ -2.1
SMC1YFL008W NOC3Q07896 663 aaPredicted RBP1.96□□□□□ -2.1
SMC1YFL008W YDL177CQ12257 170 aa1.96□□□□□ -2.1
SMC1YFL008W PAN1P32521 1480 aa1.96□□□□□ -2.1
SMC1YFL008W VTH1P40438 1549 aa1.96□□□□□ -2.1
SMC1YFL008W VTH2P40890 1549 aa1.96□□□□□ -2.1
SMC1YFL008W MET1P36150 593 aa1.96□□□□□ -2.1
SMC1YFL008W ARL1P38116 183 aaKnown RBP1.96□□□□□ -2.1
SMC1YFL008W NPP2P39997 493 aa1.96□□□□□ -2.1
SMC1YFL008W YTA6P40328 754 aa1.96□□□□□ -2.1
SMC1YFL008W KIP3P53086 805 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms