RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	SIW14	P53965	281 aa		4.69	□□□□□ -1.66
PMI40	YER003C	SHE9	Q04172	456 aa		4.69	□□□□□ -1.66
PMI40	YER003C	FLC1	Q08967	793 aa		4.69	□□□□□ -1.66
PMI40	YER003C	GLT1	Q12680	2145 aa	Known RBP	4.69	□□□□□ -1.66
PMI40	YER003C	PHO8	P11491	566 aa		4.68	□□□□□ -1.66
PMI40	YER003C	SAC7	P17121	654 aa		4.68	□□□□□ -1.66
PMI40	YER003C	MSH3	P25336	1018 aa		4.68	□□□□□ -1.66
PMI40	YER003C	SBA1	P28707	216 aa	Known RBP	4.68	□□□□□ -1.66
PMI40	YER003C	LYP1	P32487	611 aa		4.68	□□□□□ -1.66
PMI40	YER003C	MRP8	P35719	219 aa		4.68	□□□□□ -1.66
PMI40	YER003C	RDH54	P38086	958 aa		4.68	□□□□□ -1.66
PMI40	YER003C	GGA2	P38817	585 aa	Known RBP	4.68	□□□□□ -1.66
PMI40	YER003C	MNN1	P39106	762 aa		4.68	□□□□□ -1.66
PMI40	YER003C	HXT13	P39924	564 aa		4.68	□□□□□ -1.66
PMI40	YER003C	YGL081W	P53156	320 aa		4.68	□□□□□ -1.66
PMI40	YER003C	HXT17	P53631	564 aa		4.68	□□□□□ -1.66
PMI40	YER003C	HXT15	P54854	567 aa		4.68	□□□□□ -1.66
PMI40	YER003C	PEX13	P80667	386 aa		4.68	□□□□□ -1.66
PMI40	YER003C	HAS1	Q03532	505 aa	Known RBP	4.68	□□□□□ -1.66
PMI40	YER003C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
PMI40	YER003C	SPO71	Q03868	1245 aa		4.68	□□□□□ -1.66
PMI40	YER003C	SPO20	Q04359	397 aa		4.68	□□□□□ -1.66
PMI40	YER003C	HDA2	Q06629	674 aa		4.68	□□□□□ -1.66
PMI40	YER003C	YLR125W	Q12138	136 aa		4.68	□□□□□ -1.66
PMI40	YER003C	TY4B-P	A0A0B7P3V8	1104 aa		4.67	□□□□□ -1.66
PMI40	YER003C	HTS1	P07263	546 aa	Known RBP	4.67	□□□□□ -1.66
PMI40	YER003C	VMA4	P22203	233 aa	Known RBP	4.67	□□□□□ -1.66
PMI40	YER003C	STE5	P32917	917 aa		4.67	□□□□□ -1.66
PMI40	YER003C	YBR184W	P38299	523 aa		4.67	□□□□□ -1.66
PMI40	YER003C	PAN5	P38787	379 aa		4.67	□□□□□ -1.66
PMI40	YER003C	RSP5	P39940	809 aa	Known RBP	4.67	□□□□□ -1.66
PMI40	YER003C	TED1	P40533	473 aa		4.67	□□□□□ -1.66
PMI40	YER003C	IRR1	P40541	1150 aa		4.67	□□□□□ -1.66
PMI40	YER003C	YIG1	Q08956	461 aa		4.67	□□□□□ -1.66
PMI40	YER003C	OSH2	Q12451	1283 aa		4.67	□□□□□ -1.66
PMI40	YER003C	TY4A-H	Q6Q5P6	413 aa		4.67	□□□□□ -1.66
PMI40	YER003C	TRP2	P00899	507 aa	Known RBP	4.66	□□□□□ -1.66
PMI40	YER003C	HEM13	P11353	328 aa	Known RBP	4.66	□□□□□ -1.66
PMI40	YER003C	RPL8B	P29453	256 aa	Known RBP	4.66	□□□□□ -1.66
PMI40	YER003C	TIM23	P32897	222 aa		4.66	□□□□□ -1.66
PMI40	YER003C	RER2	P35196	286 aa		4.66	□□□□□ -1.66
PMI40	YER003C	YKL077W	P36081	392 aa		4.66	□□□□□ -1.66
PMI40	YER003C	PRY1	P47032	299 aa		4.66	□□□□□ -1.66
PMI40	YER003C	YGR125W	P53273	1036 aa		4.66	□□□□□ -1.66
PMI40	YER003C	DSE4	P53753	1117 aa		4.66	□□□□□ -1.66
PMI40	YER003C	FMP25	Q08023	583 aa		4.66	□□□□□ -1.66
PMI40	YER003C	YLL054C	Q12244	843 aa		4.66	□□□□□ -1.66
PMI40	YER003C	YGR161W-C	Q3E744	92 aa		4.66	□□□□□ -1.66
PMI40	YER003C	GAL11	P19659	1081 aa		4.65	□□□□□ -1.67
PMI40	YER003C	HSP60	P19882	572 aa	Known RBP	4.65	□□□□□ -1.67
PMI40	YER003C	TSR4	P25040	408 aa		4.65	□□□□□ -1.67
PMI40	YER003C	TOM20	P35180	183 aa		4.65	□□□□□ -1.67
PMI40	YER003C	VBA5	P36172	582 aa		4.65	□□□□□ -1.67
PMI40	YER003C	PBY1	P38254	753 aa		4.65	□□□□□ -1.67
PMI40	YER003C	EXO5	P38289	585 aa		4.65	□□□□□ -1.67
PMI40	YER003C	POL5	P39985	1022 aa	Known RBP	4.65	□□□□□ -1.67
PMI40	YER003C	UTP22	P53254	1237 aa	Predicted RBP	4.65	□□□□□ -1.67
PMI40	YER003C	CIT1	P00890	479 aa		4.64	□□□□□ -1.67
PMI40	YER003C	MAC1	P35192	417 aa		4.64	□□□□□ -1.67
PMI40	YER003C	TAT1	P38085	619 aa		4.64	□□□□□ -1.67
PMI40	YER003C	ARL1	P38116	183 aa	Known RBP	4.64	□□□□□ -1.67
PMI40	YER003C	SEA4	P38164	1038 aa		4.64	□□□□□ -1.67
PMI40	YER003C	RRM3	P38766	723 aa		4.64	□□□□□ -1.67
PMI40	YER003C	MSH4	P40965	878 aa	Predicted RBP	4.64	□□□□□ -1.67
PMI40	YER003C	GCV1	P48015	400 aa		4.64	□□□□□ -1.67
PMI40	YER003C	ERP6	P53198	216 aa		4.64	□□□□□ -1.67
PMI40	YER003C	UTP8	P53276	713 aa	Known RBP	4.64	□□□□□ -1.67
PMI40	YER003C	ELG1	Q12050	791 aa		4.64	□□□□□ -1.67
PMI40	YER003C	REC8	Q12188	680 aa		4.64	□□□□□ -1.67
PMI40	YER003C	CAN1	P04817	590 aa		4.63	□□□□□ -1.67
PMI40	YER003C	THI4	P32318	326 aa		4.63	□□□□□ -1.67
PMI40	YER003C	SFA1	P32771	386 aa		4.63	□□□□□ -1.67
PMI40	YER003C	ABD1	P32783	436 aa	Predicted RBP	4.63	□□□□□ -1.67
PMI40	YER003C	MAE1	P36013	669 aa	Known RBP	4.63	□□□□□ -1.67
PMI40	YER003C	SNF7	P39929	240 aa	Known RBP	4.63	□□□□□ -1.67
PMI40	YER003C	YJR142W	P47173	342 aa		4.63	□□□□□ -1.67
PMI40	YER003C	ROD1	Q02805	837 aa		4.63	□□□□□ -1.67
PMI40	YER003C	YLR225C	Q05948	407 aa	Known RBP	4.63	□□□□□ -1.67
PMI40	YER003C	EST2	Q06163	884 aa		4.63	□□□□□ -1.67
PMI40	YER003C	EAF1	Q06337	982 aa		4.63	□□□□□ -1.67
PMI40	YER003C	UBX5	Q06682	500 aa		4.63	□□□□□ -1.67
PMI40	YER003C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	RIP-Chip
PMI40	YER003C	SSB1	P11484	613 aa	Known RBP	4.62	□□□□□ -1.67
PMI40	YER003C	MKK2	P32491	506 aa		4.62	□□□□□ -1.67
PMI40	YER003C	GRX4	P32642	244 aa		4.62	□□□□□ -1.67
PMI40	YER003C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
PMI40	YER003C	SSB2	P40150	613 aa	Known RBP	4.62	□□□□□ -1.67
PMI40	YER003C	HUL4	P40985	892 aa		4.62	□□□□□ -1.67
PMI40	YER003C	PFD1	P46988	109 aa		4.62	□□□□□ -1.67
PMI40	YER003C	MTR4	P47047	1073 aa	Known RBP	4.62	□□□□□ -1.67
PMI40	YER003C	MEC3	Q02574	474 aa		4.62	□□□□□ -1.67
PMI40	YER003C	RKM4	Q12504	494 aa		4.62	□□□□□ -1.67
PMI40	YER003C	TOP1	P04786	769 aa		4.61	□□□□□ -1.67
PMI40	YER003C	ERR1	P0CX10	437 aa		4.61	□□□□□ -1.67
PMI40	YER003C	ERR2	P0CX11	437 aa		4.61	□□□□□ -1.67
PMI40	YER003C	INO1	P11986	533 aa		4.61	□□□□□ -1.67
PMI40	YER003C	PRP9	P19736	530 aa	Known RBP	4.61	□□□□□ -1.67
PMI40	YER003C	SYP1	P25623	870 aa	Known RBP	4.61	□□□□□ -1.67
PMI40	YER003C	ARE1	P25628	610 aa		4.61	□□□□□ -1.67
PMI40	YER003C	SCT1	P32784	759 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms