RNA–Protein interactions for RNA: YDR495C

VPS3, Transcript of Component of CORVET membrane tethering complex, yeastyeast

Gene VPS3, Length 3,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS3YDR495C FIR1P40020 876 aa3.62□□□□□ -1.83
VPS3YDR495C TGL3P40308 642 aa3.62□□□□□ -1.83
VPS3YDR495C BNA1P47096 177 aa3.62□□□□□ -1.83
VPS3YDR495C RSC1P53236 928 aa3.62□□□□□ -1.83
VPS3YDR495C YLR001CQ07895 862 aa3.62□□□□□ -1.83
VPS3YDR495C RTP1Q12751 981 aa3.62□□□□□ -1.83
VPS3YDR495C HSC82P15108 705 aaKnown RBP3.62□□□□□ -1.83
VPS3YDR495C VBA3P25594 458 aa3.62□□□□□ -1.83
VPS3YDR495C TBS1P38114 1094 aa3.62□□□□□ -1.83
VPS3YDR495C XDJ1P39102 459 aa3.62□□□□□ -1.83
VPS3YDR495C MTR4P47047 1073 aaKnown RBP3.62□□□□□ -1.83
VPS3YDR495C TSR2Q06672 205 aaKnown RBP3.62□□□□□ -1.83
VPS3YDR495C VIP1Q06685 1146 aaKnown RBP3.62□□□□□ -1.83
VPS3YDR495C TOM70P07213 617 aaKnown RBP3.61□□□□□ -1.83
VPS3YDR495C TOP3P13099 656 aa3.61□□□□□ -1.83
VPS3YDR495C MSN1P22148 382 aa3.61□□□□□ -1.83
VPS3YDR495C MCM10P32354 571 aa3.61□□□□□ -1.83
VPS3YDR495C IRS4P36115 615 aaKnown RBP3.61□□□□□ -1.83
VPS3YDR495C ABZ1P37254 787 aaPredicted RBP3.61□□□□□ -1.83
VPS3YDR495C FAF1P40546 346 aaPredicted RBP3.61□□□□□ -1.83
VPS3YDR495C ALA1P40825 983 aaKnown RBP3.61□□□□□ -1.83
VPS3YDR495C RSM26P47141 266 aa3.61□□□□□ -1.83
VPS3YDR495C MTQ2Q03920 221 aaPredicted RBP3.61□□□□□ -1.83
VPS3YDR495C REH1Q06709 432 aa3.61□□□□□ -1.83
VPS3YDR495C PRP5P21372 849 aaPredicted RBP3.61□□□□□ -1.83
VPS3YDR495C CCC2P38995 1004 aa3.61□□□□□ -1.83
VPS3YDR495C NTA1P40354 457 aa3.61□□□□□ -1.83
VPS3YDR495C HEH2Q03281 663 aa3.61□□□□□ -1.83
VPS3YDR495C SXM1Q04175 944 aaKnown RBP3.61□□□□□ -1.83
VPS3YDR495C RLP24Q07915 199 aaKnown RBP3.61□□□□□ -1.83
VPS3YDR495C RRP6Q12149 733 aaKnown RBP3.61□□□□□ -1.83
VPS3YDR495C VPS5Q92331 675 aa3.61□□□□□ -1.83
VPS3YDR495C CDC31P06704 161 aaKnown RBP3.6□□□□□ -1.83
VPS3YDR495C LYP1P32487 611 aa3.6□□□□□ -1.83
VPS3YDR495C YGL015CP33199 130 aa3.6□□□□□ -1.83
VPS3YDR495C SQT1P35184 431 aa3.6□□□□□ -1.83
VPS3YDR495C ECM2P38241 364 aaKnown RBP3.6□□□□□ -1.83
VPS3YDR495C DOT6P40059 670 aaKnown RBP3.6□□□□□ -1.83
VPS3YDR495C HIS6P40545 261 aa3.6□□□□□ -1.83
VPS3YDR495C RRN7P40992 514 aa3.6□□□□□ -1.83
VPS3YDR495C SSP2Q08646 371 aa3.6□□□□□ -1.83
VPS3YDR495C YDR056CQ12025 205 aa3.6□□□□□ -1.83
VPS3YDR495C KCC4P25389 1037 aa3.6□□□□□ -1.83
VPS3YDR495C CHS3P29465 1165 aa3.6□□□□□ -1.83
VPS3YDR495C RER2P35196 286 aa3.6□□□□□ -1.83
VPS3YDR495C YBR284WP38150 797 aa3.6□□□□□ -1.83
VPS3YDR495C YHL041WP38730 149 aa3.6□□□□□ -1.83
VPS3YDR495C NMD3P38861 518 aaKnown RBP3.6□□□□□ -1.83
VPS3YDR495C MBP1P39678 833 aa3.6□□□□□ -1.83
VPS3YDR495C GNP1P48813 663 aa3.6□□□□□ -1.83
VPS3YDR495C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
VPS3YDR495C PSR2Q07949 397 aa3.6□□□□□ -1.83
VPS3YDR495C PRP9P19736 530 aaKnown RBP3.6□□□□□ -1.83
VPS3YDR495C SCD5P34758 872 aa3.6□□□□□ -1.83
VPS3YDR495C YKL133CP36066 463 aa3.6□□□□□ -1.83
VPS3YDR495C UTP7P40055 554 aaKnown RBP3.6□□□□□ -1.83
VPS3YDR495C VTC2P43585 828 aa3.6□□□□□ -1.83
VPS3YDR495C SRB7P47822 140 aa3.6□□□□□ -1.83
VPS3YDR495C BUL2Q03758 920 aaKnown RBP3.6□□□□□ -1.83
VPS3YDR495C MDM12Q92328 271 aa3.6□□□□□ -1.83
VPS3YDR495C HBN1Q96VH4 193 aa3.6□□□□□ -1.83
VPS3YDR495C RAD18P10862 487 aa3.59□□□□□ -1.83
VPS3YDR495C INO1P11986 533 aa3.59□□□□□ -1.83
VPS3YDR495C SIS1P25294 352 aaKnown RBP3.59□□□□□ -1.83
VPS3YDR495C PRP19P32523 503 aaKnown RBP3.59□□□□□ -1.83
VPS3YDR495C AMN1P38285 549 aaPredicted RBP3.59□□□□□ -1.83
VPS3YDR495C SAH1P39954 449 aaKnown RBP3.59□□□□□ -1.83
VPS3YDR495C ESL1P40456 1118 aa3.59□□□□□ -1.83
VPS3YDR495C SAP185P40856 1058 aa3.59□□□□□ -1.83
VPS3YDR495C NUT1P53114 1132 aa3.59□□□□□ -1.83
VPS3YDR495C MET13P53128 600 aa3.59□□□□□ -1.83
VPS3YDR495C VPS30Q02948 557 aa3.59□□□□□ -1.83
VPS3YDR495C ISU1Q03020 165 aa3.59□□□□□ -1.83
VPS3YDR495C MLC2Q06580 163 aa3.59□□□□□ -1.83
VPS3YDR495C HDA2Q06629 674 aa3.59□□□□□ -1.83
VPS3YDR495C CMR1Q12510 522 aaKnown RBP3.59□□□□□ -1.83
VPS3YDR495C Q0182Q9ZZW1 134 aa3.59□□□□□ -1.83
VPS3YDR495C COBP00163 385 aa3.59□□□□□ -1.84
VPS3YDR495C CYB2P00175 591 aa3.59□□□□□ -1.84
VPS3YDR495C SPS1P08458 490 aa3.59□□□□□ -1.84
VPS3YDR495C DAL3P32459 195 aa3.59□□□□□ -1.84
VPS3YDR495C DUR3P33413 735 aa3.59□□□□□ -1.84
VPS3YDR495C APM2P38700 605 aa3.59□□□□□ -1.84
VPS3YDR495C PAN5P38787 379 aa3.59□□□□□ -1.84
VPS3YDR495C TMA108P40462 946 aa3.59□□□□□ -1.84
VPS3YDR495C QDR2P40474 542 aa3.59□□□□□ -1.84
VPS3YDR495C RSC8P43609 557 aaKnown RBP3.59□□□□□ -1.84
VPS3YDR495C PEX13P80667 386 aa3.59□□□□□ -1.84
VPS3YDR495C CTR9P89105 1077 aa3.59□□□□□ -1.84
VPS3YDR495C YLR352WQ06479 807 aa3.59□□□□□ -1.84
VPS3YDR495C IRC3Q06683 689 aa3.59□□□□□ -1.84
VPS3YDR495C BUD20Q08004 166 aaPredicted RBP3.59□□□□□ -1.84
VPS3YDR495C NEW1Q08972 1196 aaKnown RBP3.59□□□□□ -1.84
VPS3YDR495C MSB4Q12317 492 aa3.59□□□□□ -1.84
VPS3YDR495C PEX28P38848 579 aa3.58□□□□□ -1.84
VPS3YDR495C MGS1P40151 587 aa3.58□□□□□ -1.84
VPS3YDR495C RRD1P40454 393 aaKnown RBP3.58□□□□□ -1.84
VPS3YDR495C SUM1P46676 1062 aa3.58□□□□□ -1.84
VPS3YDR495C TAN1P53072 289 aaPredicted RBP3.58□□□□□ -1.84
VPS3YDR495C SNP1Q00916 300 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms