RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W YVC1Q12324 675 aa7.06□□□□□ -1.28
RRP17YDR412W SQT1P35184 431 aa7.05□□□□□ -1.28
RRP17YDR412W RPS26AP39938 119 aaKnown RBP7.05□□□□□ -1.28
RRP17YDR412W RPS26BP39939 119 aaKnown RBP7.05□□□□□ -1.28
RRP17YDR412W SEC23P15303 768 aaKnown RBP7.04□□□□□ -1.28
RRP17YDR412W AFG2P32794 780 aa7.04□□□□□ -1.28
RRP17YDR412W PEX7P39108 375 aa7.04□□□□□ -1.28
RRP17YDR412W MTR4P47047 1073 aaKnown RBP7.04□□□□□ -1.28
RRP17YDR412W YGR122WP53272 402 aa7.04□□□□□ -1.28
RRP17YDR412W PUS7Q08647 676 aaKnown RBP7.04□□□□□ -1.28
RRP17YDR412W YLR257WQ06146 321 aaKnown RBP7.03□□□□□ -1.28
RRP17YDR412W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
RRP17YDR412W CYC8P14922 966 aa7.02□□□□□ -1.29
RRP17YDR412W RET1P22276 1149 aaKnown RBP7.02□□□□□ -1.29
RRP17YDR412W YJR107WP47145 328 aa7.02□□□□□ -1.29
RRP17YDR412W TPP1Q03796 238 aa7.02□□□□□ -1.29
RRP17YDR412W RSA3Q05942 220 aaKnown RBP7.02□□□□□ -1.29
RRP17YDR412W RAD2P07276 1031 aa7.01□□□□□ -1.29
RRP17YDR412W VMA4P22203 233 aaKnown RBP7.01□□□□□ -1.29
RRP17YDR412W SLD2P34252 453 aa7.01□□□□□ -1.29
RRP17YDR412W NNK1P36003 928 aa7.01□□□□□ -1.29
RRP17YDR412W PRE9P23638 258 aaKnown RBP7□□□□□ -1.29
RRP17YDR412W AVT1P47082 602 aa7□□□□□ -1.29
RRP17YDR412W SSY1Q03770 852 aa7□□□□□ -1.29
RRP17YDR412W HDA2Q06629 674 aa7□□□□□ -1.29
RRP17YDR412W DED1P06634 604 aaKnown RBP6.99□□□□□ -1.29
RRP17YDR412W GNP1P48813 663 aa6.99□□□□□ -1.29
RRP17YDR412W TRE1Q08919 783 aa6.99□□□□□ -1.29
RRP17YDR412W POL12P38121 705 aaPredicted RBP6.98□□□□□ -1.29
RRP17YDR412W YJL045WP47052 634 aa6.98□□□□□ -1.29
RRP17YDR412W ROD1Q02805 837 aa6.98□□□□□ -1.29
RRP17YDR412W EST2Q06163 884 aa6.98□□□□□ -1.29
RRP17YDR412W LPX1Q12405 387 aaKnown RBP6.98□□□□□ -1.29
RRP17YDR412W SAM35P14693 329 aa6.97□□□□□ -1.29
RRP17YDR412W PRO1P32264 428 aa6.97□□□□□ -1.29
RRP17YDR412W HSP78P33416 811 aa6.97□□□□□ -1.29
RRP17YDR412W SEG2P34250 1132 aa6.97□□□□□ -1.29
RRP17YDR412W ADD66P36040 267 aa6.97□□□□□ -1.29
RRP17YDR412W YOR059CQ08448 450 aaKnown RBP6.97□□□□□ -1.29
RRP17YDR412W INO80P53115 1489 aa6.97□□□□□ -1.29
RRP17YDR412W SEC8P32855 1065 aa6.96□□□□□ -1.3
RRP17YDR412W QNS1P38795 714 aaKnown RBP6.96□□□□□ -1.3
RRP17YDR412W HXT13P39924 564 aa6.96□□□□□ -1.3
RRP17YDR412W MRPS18P42847 217 aa6.96□□□□□ -1.3
RRP17YDR412W HXT17P53631 564 aa6.96□□□□□ -1.3
RRP17YDR412W HXT15P54854 567 aa6.96□□□□□ -1.3
RRP17YDR412W RAT1Q02792 1006 aaKnown RBP6.96□□□□□ -1.3
RRP17YDR412W PTC7P38797 343 aa6.95□□□□□ -1.3
RRP17YDR412W GTS1P40956 396 aa6.95□□□□□ -1.3
RRP17YDR412W RCL1Q08096 367 aaPredicted RBP6.95□□□□□ -1.3
RRP17YDR412W GCR1P07261 785 aa6.94□□□□□ -1.3
RRP17YDR412W HEM3P28789 327 aa6.94□□□□□ -1.3
RRP17YDR412W MGE1P38523 228 aa6.94□□□□□ -1.3
RRP17YDR412W GPB2P39717 880 aa6.94□□□□□ -1.3
RRP17YDR412W MCD1Q12158 566 aa6.94□□□□□ -1.3
RRP17YDR412W DFG16Q99234 619 aa6.94□□□□□ -1.3
RRP17YDR412W RNQ1P25367 405 aa6.93□□□□□ -1.3
RRP17YDR412W ALG3P38179 458 aa6.92□□□□□ -1.3
RRP17YDR412W RKM2Q03942 479 aa6.92□□□□□ -1.3
RRP17YDR412W ADP1P25371 1049 aa6.91□□□□□ -1.3
RRP17YDR412W KIP1P28742 1111 aa6.91□□□□□ -1.3
RRP17YDR412W YHL012WP38709 493 aa6.91□□□□□ -1.3
RRP17YDR412W YFL054CP43549 646 aa6.91□□□□□ -1.3
RRP17YDR412W OYE2Q03558 400 aaKnown RBP6.91□□□□□ -1.3
RRP17YDR412W LAP2Q10740 671 aa6.91□□□□□ -1.3
RRP17YDR412W YDL177CQ12257 170 aa6.91□□□□□ -1.3
RRP17YDR412W NSI1Q12457 570 aa6.91□□□□□ -1.3
RRP17YDR412W MKK2P32491 506 aa6.9□□□□□ -1.3
RRP17YDR412W MRL1Q06815 381 aa6.9□□□□□ -1.3
RRP17YDR412W SIW14P53965 281 aa6.89□□□□□ -1.31
RRP17YDR412W PTC5Q12511 572 aa6.89□□□□□ -1.31
RRP17YDR412W ELM1P32801 640 aa6.88□□□□□ -1.31
RRP17YDR412W HSE1P38753 452 aa6.88□□□□□ -1.31
RRP17YDR412W ORC3P54790 616 aa6.88□□□□□ -1.31
RRP17YDR412W HRK1Q08732 759 aaKnown RBP6.88□□□□□ -1.31
RRP17YDR412W YSC84P32793 468 aa6.87□□□□□ -1.31
RRP17YDR412W DUT1P33317 147 aa6.87□□□□□ -1.31
RRP17YDR412W TSA1P34760 196 aaKnown RBP6.87□□□□□ -1.31
RRP17YDR412W CDA2Q06703 312 aa6.87□□□□□ -1.31
RRP17YDR412W PEP7P32609 515 aa6.86□□□□□ -1.31
RRP17YDR412W ATG14P38270 344 aa6.86□□□□□ -1.31
RRP17YDR412W IRC24P40580 263 aa6.86□□□□□ -1.31
RRP17YDR412W VPS53P47061 822 aa6.86□□□□□ -1.31
RRP17YDR412W GAS1P22146 559 aaKnown RBP6.85□□□□□ -1.31
RRP17YDR412W AOS1Q06624 347 aa6.85□□□□□ -1.31
RRP17YDR412W ETP1P38748 585 aaKnown RBP6.84□□□□□ -1.31
RRP17YDR412W ESF1Q06344 628 aaKnown RBP6.84□□□□□ -1.31
RRP17YDR412W TAF13P11747 167 aa6.83□□□□□ -1.32
RRP17YDR412W SNF5P18480 905 aa6.83□□□□□ -1.32
RRP17YDR412W RER2P35196 286 aa6.83□□□□□ -1.32
RRP17YDR412W ECL1P48235 211 aa6.83□□□□□ -1.32
RRP17YDR412W SPO21Q12411 609 aa6.83□□□□□ -1.32
RRP17YDR412W YER152CP10356 443 aa6.82□□□□□ -1.32
RRP17YDR412W AIM26P32858 118 aa6.82□□□□□ -1.32
RRP17YDR412W MDL2P33311 773 aa6.82□□□□□ -1.32
RRP17YDR412W ABZ1P37254 787 aaPredicted RBP6.82□□□□□ -1.32
RRP17YDR412W SYP1P25623 870 aaKnown RBP6.81□□□□□ -1.32
RRP17YDR412W MLS1P30952 554 aa6.81□□□□□ -1.32
RRP17YDR412W RSC58Q07979 502 aa6.81□□□□□ -1.32
RRP17YDR412W BAP2P38084 609 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 70.6 ms