RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W SUM1P46676 1062 aa1.71□□□□□ -2.14
MSN5YDR335W JJJ2P46997 583 aa1.71□□□□□ -2.14
MSN5YDR335W NAN1Q02931 896 aaKnown RBP1.71□□□□□ -2.14
MSN5YDR335W FAP7Q12055 197 aaPredicted RBP1.71□□□□□ -2.14
MSN5YDR335W TMA17Q12513 150 aa1.71□□□□□ -2.14
MSN5YDR335W PHO87P25360 923 aa1.71□□□□□ -2.14
MSN5YDR335W HIR1P32479 840 aa1.71□□□□□ -2.14
MSN5YDR335W MNN4P36044 1178 aa1.71□□□□□ -2.14
MSN5YDR335W SAM37P50110 327 aa1.71□□□□□ -2.14
MSN5YDR335W SPO20Q04359 397 aa1.71□□□□□ -2.14
MSN5YDR335W DAL4Q04895 635 aa1.71□□□□□ -2.14
MSN5YDR335W BDF2Q07442 638 aa1.71□□□□□ -2.14
MSN5YDR335W BUD3P25558 1636 aa1.71□□□□□ -2.14
MSN5YDR335W PAN1P32521 1480 aa1.71□□□□□ -2.14
MSN5YDR335W CHD1P32657 1468 aa1.71□□□□□ -2.14
MSN5YDR335W MRS6P32864 603 aaKnown RBP1.7□□□□□ -2.14
MSN5YDR335W VID27P40157 782 aa1.7□□□□□ -2.14
MSN5YDR335W QDR2P40474 542 aa1.7□□□□□ -2.14
MSN5YDR335W CUZ1P53899 274 aa1.7□□□□□ -2.14
MSN5YDR335W ESF1Q06344 628 aaKnown RBP1.7□□□□□ -2.14
MSN5YDR335W PUS1Q12211 544 aaKnown RBP1.7□□□□□ -2.14
MSN5YDR335W ERP4Q12450 207 aa1.7□□□□□ -2.14
MSN5YDR335W CDC19P00549 500 aaKnown RBP1.7□□□□□ -2.14
MSN5YDR335W OPI1P21957 404 aa1.7□□□□□ -2.14
MSN5YDR335W PPH3P32345 308 aa1.7□□□□□ -2.14
MSN5YDR335W JNM1P36224 373 aa1.7□□□□□ -2.14
MSN5YDR335W YJR107WP47145 328 aa1.7□□□□□ -2.14
MSN5YDR335W YGR237CP50089 785 aa1.7□□□□□ -2.14
MSN5YDR335W GIR2Q03768 265 aaPredicted RBP1.7□□□□□ -2.14
MSN5YDR335W BRE1Q07457 700 aaKnown RBP1.7□□□□□ -2.14
MSN5YDR335W SLX4Q12098 748 aa1.7□□□□□ -2.14
MSN5YDR335W TMA7Q3E764 64 aaKnown RBP1.7□□□□□ -2.14
MSN5YDR335W MOT2P34909 587 aaKnown RBP1.7□□□□□ -2.14
MSN5YDR335W YKL222CP35995 705 aa1.7□□□□□ -2.14
MSN5YDR335W UBP12P39538 1254 aa1.7□□□□□ -2.14
MSN5YDR335W RTT106P40161 455 aa1.7□□□□□ -2.14
MSN5YDR335W VPS27P40343 622 aaKnown RBP1.7□□□□□ -2.14
MSN5YDR335W UBA2P52488 636 aa1.7□□□□□ -2.14
MSN5YDR335W MON1P53129 644 aa1.7□□□□□ -2.14
MSN5YDR335W TFB2Q02939 513 aa1.7□□□□□ -2.14
MSN5YDR335W MRL1Q06815 381 aa1.7□□□□□ -2.14
MSN5YDR335W PIN2Q12057 282 aa1.7□□□□□ -2.14
MSN5YDR335W MLP2P40457 1679 aa1.7□□□□□ -2.14
MSN5YDR335W TRK2P28584 889 aa1.69□□□□□ -2.14
MSN5YDR335W LSB3P43603 459 aaKnown RBP1.69□□□□□ -2.14
MSN5YDR335W CTR9P89105 1077 aa1.69□□□□□ -2.14
MSN5YDR335W MEH1Q02205 184 aa1.69□□□□□ -2.14
MSN5YDR335W YMR074CQ04773 145 aa1.69□□□□□ -2.14
MSN5YDR335W NOC3Q07896 663 aaPredicted RBP1.69□□□□□ -2.14
MSN5YDR335W FLC1Q08967 793 aa1.69□□□□□ -2.14
MSN5YDR335W SSN2P38931 1420 aa1.69□□□□□ -2.14
MSN5YDR335W DED1P06634 604 aaKnown RBP1.69□□□□□ -2.14
MSN5YDR335W VMA3P25515 160 aa1.69□□□□□ -2.14
MSN5YDR335W GCD6P32501 712 aaKnown RBP1.69□□□□□ -2.14
MSN5YDR335W MTC2P34246 357 aa1.69□□□□□ -2.14
MSN5YDR335W GEM1P39722 662 aa1.69□□□□□ -2.14
MSN5YDR335W HUL4P40985 892 aa1.69□□□□□ -2.14
MSN5YDR335W MRPS18P42847 217 aa1.69□□□□□ -2.14
MSN5YDR335W YJL049WP47048 450 aa1.69□□□□□ -2.14
MSN5YDR335W ACF4P47129 309 aa1.69□□□□□ -2.14
MSN5YDR335W MDM1Q01846 1127 aa1.69□□□□□ -2.14
MSN5YDR335W ERO1Q03103 563 aa1.69□□□□□ -2.14
MSN5YDR335W RPN4Q03465 531 aa1.69□□□□□ -2.14
MSN5YDR335W TRS120Q04183 1289 aa1.69□□□□□ -2.14
MSN5YDR335W SPO75Q07798 868 aa1.69□□□□□ -2.14
MSN5YDR335W GAS4Q08271 471 aa1.69□□□□□ -2.14
MSN5YDR335W MSH2P25847 964 aa1.69□□□□□ -2.14
MSN5YDR335W SWI3P32591 825 aa1.69□□□□□ -2.14
MSN5YDR335W TFC4P33339 1025 aa1.69□□□□□ -2.14
MSN5YDR335W YKL069WP36088 180 aa1.69□□□□□ -2.14
MSN5YDR335W MSC7P38694 644 aa1.69□□□□□ -2.14
MSN5YDR335W MPP10P47083 593 aaKnown RBP1.69□□□□□ -2.14
MSN5YDR335W TAN1P53072 289 aaPredicted RBP1.69□□□□□ -2.14
MSN5YDR335W SDA1P53313 767 aaKnown RBP1.69□□□□□ -2.14
MSN5YDR335W YMR018WQ04364 514 aa1.69□□□□□ -2.14
MSN5YDR335W AI1P03875 834 aa1.68□□□□□ -2.14
MSN5YDR335W MSN1P22148 382 aa1.68□□□□□ -2.14
MSN5YDR335W NGR1P32831 672 aaKnown RBP1.68□□□□□ -2.14
MSN5YDR335W TYS1P36421 394 aaKnown RBP1.68□□□□□ -2.14
MSN5YDR335W NCL1P38205 684 aaKnown RBP1.68□□□□□ -2.14
MSN5YDR335W ALG14P38242 237 aa1.68□□□□□ -2.14
MSN5YDR335W RSP5P39940 809 aaKnown RBP1.68□□□□□ -2.14
MSN5YDR335W SPR3P41901 512 aa1.68□□□□□ -2.14
MSN5YDR335W UBP15P50101 1230 aa1.68□□□□□ -2.14
MSN5YDR335W CEF1Q03654 590 aaPredicted RBP1.68□□□□□ -2.14
MSN5YDR335W TY1A-MR1Q04215 440 aa1.68□□□□□ -2.14
MSN5YDR335W EAF1Q06337 982 aa1.68□□□□□ -2.14
MSN5YDR335W OPI10Q08202 246 aa1.68□□□□□ -2.14
MSN5YDR335W NOP14Q99207 810 aaKnown RBP1.68□□□□□ -2.14
MSN5YDR335W ARO1P08566 1588 aaKnown RBP1.68□□□□□ -2.14
MSN5YDR335W TAT1P38085 619 aa1.68□□□□□ -2.14
MSN5YDR335W YBR184WP38299 523 aa1.68□□□□□ -2.14
MSN5YDR335W NOP2P40991 618 aaKnown RBP1.68□□□□□ -2.14
MSN5YDR335W SBE2P42223 864 aaKnown RBP1.68□□□□□ -2.14
MSN5YDR335W RGD2P43556 714 aa1.68□□□□□ -2.14
MSN5YDR335W PRP43P53131 767 aaKnown RBP1.68□□□□□ -2.14
MSN5YDR335W CUS1Q02554 436 aaPredicted RBP1.68□□□□□ -2.14
MSN5YDR335W HIM1Q06674 414 aa1.68□□□□□ -2.14
MSN5YDR335W GAS5Q08193 484 aa1.68□□□□□ -2.14
MSN5YDR335W NUP170P38181 1502 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms