RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	YHR219W	P38900	624 aa		4.62	□□□□□ -1.67
SWF1	YDR126W	XKS1	P42826	600 aa		4.62	□□□□□ -1.67
SWF1	YDR126W	RSA3	Q05942	220 aa	Known RBP	4.62	□□□□□ -1.67
SWF1	YDR126W	LAP2	Q10740	671 aa		4.62	□□□□□ -1.67
SWF1	YDR126W	MDL2	P33311	773 aa		4.61	□□□□□ -1.67
SWF1	YDR126W	YDL177C	Q12257	170 aa		4.61	□□□□□ -1.67
SWF1	YDR126W	SQT1	P35184	431 aa		4.6	□□□□□ -1.67
SWF1	YDR126W	ATG14	P38270	344 aa		4.6	□□□□□ -1.67
SWF1	YDR126W	PPX1	P38698	397 aa		4.6	□□□□□ -1.67
SWF1	YDR126W	RSM26	P47141	266 aa		4.6	□□□□□ -1.67
SWF1	YDR126W	MRPL22	P53881	309 aa		4.6	□□□□□ -1.67
SWF1	YDR126W	PEX13	P80667	386 aa		4.6	□□□□□ -1.67
SWF1	YDR126W	ULP1	Q02724	621 aa		4.6	□□□□□ -1.67
SWF1	YDR126W	RKM2	Q03942	479 aa		4.6	□□□□□ -1.67
SWF1	YDR126W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
SWF1	YDR126W	SRO9	P25567	434 aa	Known RBP	4.59	□□□□□ -1.67
SWF1	YDR126W	UGA4	P32837	571 aa		4.59	□□□□□ -1.67
SWF1	YDR126W	SSF1	P38789	453 aa	Predicted RBP	4.59	□□□□□ -1.67
SWF1	YDR126W	TAF1	P46677	1066 aa		4.59	□□□□□ -1.67
SWF1	YDR126W	FOL2	P51601	243 aa	Known RBP	4.59	□□□□□ -1.67
SWF1	YDR126W	RIM8	P53179	542 aa		4.59	□□□□□ -1.67
SWF1	YDR126W	DAL4	Q04895	635 aa		4.59	□□□□□ -1.67
SWF1	YDR126W	RDH54	P38086	958 aa		4.58	□□□□□ -1.68
SWF1	YDR126W	AIM3	P38266	947 aa	Known RBP	4.58	□□□□□ -1.68
SWF1	YDR126W	ETP1	P38748	585 aa	Known RBP	4.58	□□□□□ -1.68
SWF1	YDR126W	PEX28	P38848	579 aa		4.58	□□□□□ -1.68
SWF1	YDR126W	NMD3	P38861	518 aa	Known RBP	4.58	□□□□□ -1.68
SWF1	YDR126W	GIP4	P39732	760 aa		4.58	□□□□□ -1.68
SWF1	YDR126W	VPS53	P47061	822 aa		4.58	□□□□□ -1.68
SWF1	YDR126W	MET4	P32389	672 aa		4.57	□□□□□ -1.68
SWF1	YDR126W	FLR1	P38124	548 aa		4.57	□□□□□ -1.68
SWF1	YDR126W	QNS1	P38795	714 aa	Known RBP	4.57	□□□□□ -1.68
SWF1	YDR126W	STM1	P39015	273 aa	Known RBP	4.57	□□□□□ -1.68
SWF1	YDR126W	DAK2	P43550	591 aa		4.57	□□□□□ -1.68
SWF1	YDR126W	YJL045W	P47052	634 aa		4.57	□□□□□ -1.68
SWF1	YDR126W	SOD2	P00447	233 aa		4.56	□□□□□ -1.68
SWF1	YDR126W	ADD66	P36040	267 aa		4.56	□□□□□ -1.68
SWF1	YDR126W	YGL140C	P53120	1219 aa		4.56	□□□□□ -1.68
SWF1	YDR126W	SNO2	P53823	222 aa		4.56	□□□□□ -1.68
SWF1	YDR126W	YPL109C	Q02981	657 aa		4.56	□□□□□ -1.68
SWF1	YDR126W	ADI1	Q03677	179 aa		4.56	□□□□□ -1.68
SWF1	YDR126W	MSC6	Q08818	692 aa	Known RBP	4.56	□□□□□ -1.68
SWF1	YDR126W	OXR1	Q08952	273 aa		4.56	□□□□□ -1.68
SWF1	YDR126W	SEC23	P15303	768 aa	Known RBP	4.55	□□□□□ -1.68
SWF1	YDR126W	ENV11	P53246	860 aa		4.55	□□□□□ -1.68
SWF1	YDR126W	YNR063W	P53749	607 aa		4.55	□□□□□ -1.68
SWF1	YDR126W	HDA2	Q06629	674 aa		4.55	□□□□□ -1.68
SWF1	YDR126W	YSC84	P32793	468 aa		4.54	□□□□□ -1.68
SWF1	YDR126W	AIM26	P32858	118 aa		4.54	□□□□□ -1.68
SWF1	YDR126W	TOS4	Q06266	489 aa		4.54	□□□□□ -1.68
SWF1	YDR126W	RSC58	Q07979	502 aa		4.54	□□□□□ -1.68
SWF1	YDR126W	NBA1	Q08229	501 aa	Known RBP	4.54	□□□□□ -1.68
SWF1	YDR126W	HEM13	P11353	328 aa	Known RBP	4.53	□□□□□ -1.68
SWF1	YDR126W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
SWF1	YDR126W	EST2	Q06163	884 aa		4.53	□□□□□ -1.68
SWF1	YDR126W	YPL277C	Q08989	487 aa		4.53	□□□□□ -1.68
SWF1	YDR126W	WHI5	Q12416	295 aa		4.53	□□□□□ -1.68
SWF1	YDR126W	COQ4	O13525	335 aa		4.52	□□□□□ -1.69
SWF1	YDR126W	HXK1	P04806	485 aa	Known RBP	4.52	□□□□□ -1.69
SWF1	YDR126W	RPS13	P05756	151 aa	Known RBP	4.52	□□□□□ -1.69
SWF1	YDR126W	TAF13	P11747	167 aa		4.52	□□□□□ -1.69
SWF1	YDR126W	AFG2	P32794	780 aa		4.52	□□□□□ -1.69
SWF1	YDR126W	TOD6	P34219	525 aa		4.52	□□□□□ -1.69
SWF1	YDR126W	FAA3	P39002	694 aa		4.52	□□□□□ -1.69
SWF1	YDR126W	SPS1	P08458	490 aa		4.51	□□□□□ -1.69
SWF1	YDR126W	BAP2	P38084	609 aa		4.51	□□□□□ -1.69
SWF1	YDR126W	CCZ1	P38273	704 aa		4.51	□□□□□ -1.69
SWF1	YDR126W	THI12	P42883	340 aa		4.51	□□□□□ -1.69
SWF1	YDR126W	THI5	P43534	340 aa		4.51	□□□□□ -1.69
SWF1	YDR126W	THI11	P47183	340 aa		4.51	□□□□□ -1.69
SWF1	YDR126W	THI13	Q07748	340 aa		4.51	□□□□□ -1.69
SWF1	YDR126W	KIP1	P28742	1111 aa		4.5	□□□□□ -1.69
SWF1	YDR126W	SEC20	P28791	383 aa		4.5	□□□□□ -1.69
SWF1	YDR126W	RPT1	P33299	467 aa	Known RBP	4.49	□□□□□ -1.69
SWF1	YDR126W	PIC2	P40035	300 aa		4.49	□□□□□ -1.69
SWF1	YDR126W	TNA1	P53322	534 aa		4.49	□□□□□ -1.69
SWF1	YDR126W	HOS3	Q02959	697 aa	Known RBP	4.49	□□□□□ -1.69
SWF1	YDR126W	YDR132C	Q03900	495 aa		4.49	□□□□□ -1.69
SWF1	YDR126W	RCL1	Q08096	367 aa	Predicted RBP	4.49	□□□□□ -1.69
SWF1	YDR126W	PTC5	Q12511	572 aa		4.49	□□□□□ -1.69
SWF1	YDR126W	YLR358C	O13565	187 aa		4.48	□□□□□ -1.69
SWF1	YDR126W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.48	□□□□□ -1.69	not detected
SWF1	YDR126W	PIK1	P39104	1066 aa		4.48	□□□□□ -1.69
SWF1	YDR126W	RPN3	P40016	523 aa	Known RBP	4.48	□□□□□ -1.69
SWF1	YDR126W	HNT2	P49775	206 aa		4.48	□□□□□ -1.69
SWF1	YDR126W	CLU1	Q03690	1277 aa	Known RBP	4.48	□□□□□ -1.69
SWF1	YDR126W	YPL260W	Q08977	551 aa		4.48	□□□□□ -1.69
SWF1	YDR126W	MCD1	Q12158	566 aa		4.48	□□□□□ -1.69
SWF1	YDR126W	SNF5	P18480	905 aa		4.47	□□□□□ -1.69
SWF1	YDR126W	ALG3	P38179	458 aa		4.47	□□□□□ -1.69
SWF1	YDR126W	GPB2	P39717	880 aa		4.47	□□□□□ -1.69
SWF1	YDR126W	SEC26	P41810	973 aa	Known RBP	4.47	□□□□□ -1.69
SWF1	YDR126W	ENT3	P47160	408 aa		4.47	□□□□□ -1.69
SWF1	YDR126W	YGR122W	P53272	402 aa		4.47	□□□□□ -1.69
SWF1	YDR126W	GSF2	Q04697	403 aa	Known RBP	4.47	□□□□□ -1.69
SWF1	YDR126W	SGD1	Q06132	899 aa		4.47	□□□□□ -1.69
SWF1	YDR126W	YOR352W	Q08816	343 aa		4.47	□□□□□ -1.69
SWF1	YDR126W	DED1	P06634	604 aa	Known RBP	4.45	□□□□□ -1.7
SWF1	YDR126W	PRE9	P23638	258 aa	Known RBP	4.45	□□□□□ -1.7
SWF1	YDR126W	LAM1	P38851	1228 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 262.8 ms