RNA–Protein interactions for RNA: YDR002W

YRB1, Transcript of Ran GTPase binding protein, yeast

Gene YRB1, Length 606 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRB1	YDR002W	TY1A-LR3	P0CX75	440 aa		3.5	□□□□□ -1.85
YRB1	YDR002W	TY1A-ML2	P0CX76	440 aa		3.5	□□□□□ -1.85
YRB1	YDR002W	DEF1	P35732	738 aa	Known RBP	3.5	□□□□□ -1.85
YRB1	YDR002W	MOH1	P38191	138 aa		3.5	□□□□□ -1.85
YRB1	YDR002W	ECM2	P38241	364 aa	Known RBP	3.5	□□□□□ -1.85
YRB1	YDR002W	NMD3	P38861	518 aa	Known RBP	3.5	□□□□□ -1.85
YRB1	YDR002W	TY1A-GR1	Q12085	440 aa		3.5	□□□□□ -1.85
YRB1	YDR002W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.5	□□□□□ -1.85
YRB1	YDR002W	TY1A-OL	Q92392	440 aa	Known RBP	3.5	□□□□□ -1.85
YRB1	YDR002W	PLB2	Q03674	706 aa		3.49	□□□□□ -1.85
YRB1	YDR002W	ACK1	Q07622	623 aa	Predicted RBP	3.49	□□□□□ -1.85
YRB1	YDR002W	NBA1	Q08229	501 aa	Known RBP	3.49	□□□□□ -1.85
YRB1	YDR002W	MSS4	P38994	779 aa		3.48	□□□□□ -1.85
YRB1	YDR002W	SAP155	P43612	1002 aa		3.48	□□□□□ -1.85
YRB1	YDR002W	UBA2	P52488	636 aa		3.48	□□□□□ -1.85
YRB1	YDR002W	LGE1	Q02796	332 aa	Known RBP	3.48	□□□□□ -1.85
YRB1	YDR002W	HRK1	Q08732	759 aa	Known RBP	3.48	□□□□□ -1.85
YRB1	YDR002W	YAR028W	P39548	234 aa		3.47	□□□□□ -1.85
YRB1	YDR002W	IOC3	P43596	787 aa		3.47	□□□□□ -1.85
YRB1	YDR002W	CWC15	Q03772	175 aa	Known RBP	3.47	□□□□□ -1.85
YRB1	YDR002W	RXT3	Q07458	294 aa		3.47	□□□□□ -1.85
YRB1	YDR002W	LSO1	Q3E827	93 aa		3.47	□□□□□ -1.85
YRB1	YDR002W	DCG1	P32460	244 aa		3.46	□□□□□ -1.86
YRB1	YDR002W	CUE2	P36075	443 aa	Known RBP	3.46	□□□□□ -1.86
YRB1	YDR002W	TTI1	P36097	1038 aa		3.46	□□□□□ -1.86
YRB1	YDR002W	HGH1	P48362	394 aa	Known RBP	3.46	□□□□□ -1.86
YRB1	YDR002W	MCM5	P29496	775 aa	Known RBP	3.44	□□□□□ -1.86
YRB1	YDR002W	HSE1	P38753	452 aa		3.44	□□□□□ -1.86
YRB1	YDR002W	SLS1	P42900	643 aa		3.44	□□□□□ -1.86
YRB1	YDR002W	PNP1	Q05788	311 aa		3.44	□□□□□ -1.86
YRB1	YDR002W	RSA3	Q05942	220 aa	Known RBP	3.44	□□□□□ -1.86
YRB1	YDR002W	AIM44	Q99299	758 aa		3.44	□□□□□ -1.86
YRB1	YDR002W	CDC6	P09119	513 aa		3.43	□□□□□ -1.86
YRB1	YDR002W	SEC26	P41810	973 aa	Known RBP	3.43	□□□□□ -1.86
YRB1	YDR002W	GPB1	Q08886	897 aa		3.43	□□□□□ -1.86
YRB1	YDR002W	YKL077W	P36081	392 aa		3.42	□□□□□ -1.86
YRB1	YDR002W	YAF9	P53930	226 aa		3.42	□□□□□ -1.86
YRB1	YDR002W	RSC4	Q02206	625 aa		3.42	□□□□□ -1.86
YRB1	YDR002W	PMT7	Q06644	662 aa		3.42	□□□□□ -1.86
YRB1	YDR002W	YSC84	P32793	468 aa		3.41	□□□□□ -1.86
YRB1	YDR002W	YJL045W	P47052	634 aa		3.41	□□□□□ -1.86
YRB1	YDR002W	MON2	P48563	1636 aa	Predicted RBP	3.41	□□□□□ -1.86
YRB1	YDR002W	NAP1	P25293	417 aa	Known RBP	3.4	□□□□□ -1.87
YRB1	YDR002W	EXO5	P38289	585 aa		3.4	□□□□□ -1.87
YRB1	YDR002W	NEM1	P38757	446 aa		3.4	□□□□□ -1.87
YRB1	YDR002W	QRI1	P43123	477 aa	Known RBP	3.4	□□□□□ -1.87
YRB1	YDR002W	YLR224W	Q05947	369 aa		3.4	□□□□□ -1.87
YRB1	YDR002W	GAL10	P04397	699 aa		3.39	□□□□□ -1.87
YRB1	YDR002W	PUP1	P25043	261 aa		3.39	□□□□□ -1.87
YRB1	YDR002W	PBP1	P53297	722 aa	Known RBP	3.39	□□□□□ -1.87
YRB1	YDR002W	LAP2	Q10740	671 aa		3.39	□□□□□ -1.87
YRB1	YDR002W	STU2	P46675	888 aa		3.38	□□□□□ -1.87
YRB1	YDR002W	NUT1	P53114	1132 aa		3.38	□□□□□ -1.87
YRB1	YDR002W	VPS62	P53285	467 aa		3.38	□□□□□ -1.87
YRB1	YDR002W	SRM1	P21827	482 aa		3.37	□□□□□ -1.87
YRB1	YDR002W	MTR4	P47047	1073 aa	Known RBP	3.37	□□□□□ -1.87
YRB1	YDR002W	RCL1	Q08096	367 aa	Predicted RBP	3.37	□□□□□ -1.87
YRB1	YDR002W	COQ4	O13525	335 aa		3.36	□□□□□ -1.87
YRB1	YDR002W	YAP6	Q03935	383 aa		3.36	□□□□□ -1.87
YRB1	YDR002W	CCZ1	P38273	704 aa		3.35	□□□□□ -1.87
YRB1	YDR002W	QNS1	P38795	714 aa	Known RBP	3.35	□□□□□ -1.87
YRB1	YDR002W	SHU2	P38957	223 aa		3.35	□□□□□ -1.87
YRB1	YDR002W	RSM24	Q03976	319 aa		3.35	□□□□□ -1.87
YRB1	YDR002W	NDJ1	Q12366	352 aa		3.35	□□□□□ -1.87
YRB1	YDR002W	FLP1	P03870	423 aa		3.34	□□□□□ -1.87
YRB1	YDR002W	CMP2	P14747	604 aa		3.34	□□□□□ -1.87
YRB1	YDR002W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.34	□□□□□ -1.87	not detected
YRB1	YDR002W	UTP5	Q04177	643 aa	Known RBP	3.34	□□□□□ -1.87
YRB1	YDR002W	RSB1	Q08417	382 aa		3.34	□□□□□ -1.87
YRB1	YDR002W	NOB1	Q08444	459 aa	Known RBP	3.34	□□□□□ -1.87
YRB1	YDR002W	FUR4	P05316	633 aa	Known RBP	3.33	□□□□□ -1.88
YRB1	YDR002W	BAP2	P38084	609 aa		3.33	□□□□□ -1.88
YRB1	YDR002W	RVS167	P39743	482 aa	Known RBP	3.33	□□□□□ -1.88
YRB1	YDR002W	YER158C	P40095	573 aa		3.33	□□□□□ -1.88
YRB1	YDR002W	IOC4	Q04213	475 aa		3.33	□□□□□ -1.88
YRB1	YDR002W	AIM39	Q08223	395 aa		3.33	□□□□□ -1.88
YRB1	YDR002W	AFT2	Q08957	416 aa		3.33	□□□□□ -1.88
YRB1	YDR002W	SPO21	Q12411	609 aa		3.33	□□□□□ -1.88
YRB1	YDR002W	INO80	P53115	1489 aa		3.33	□□□□□ -1.88
YRB1	YDR002W	HRR25	P29295	494 aa	Known RBP	3.32	□□□□□ -1.88
YRB1	YDR002W	YRB30	P53107	440 aa	Predicted RBP	3.32	□□□□□ -1.88
YRB1	YDR002W	YAP7	Q08182	245 aa		3.32	□□□□□ -1.88
YRB1	YDR002W	ATG14	P38270	344 aa		3.31	□□□□□ -1.88
YRB1	YDR002W	UFD2	P54860	961 aa		3.31	□□□□□ -1.88
YRB1	YDR002W	TMN2	Q04562	672 aa		3.31	□□□□□ -1.88
YRB1	YDR002W	NOP12	Q08208	459 aa	Known RBP	3.31	□□□□□ -1.88
YRB1	YDR002W	ICT1	Q12385	394 aa		3.31	□□□□□ -1.88
YRB1	YDR002W	PIK1	P39104	1066 aa		3.3	□□□□□ -1.88
YRB1	YDR002W	XKS1	P42826	600 aa		3.3	□□□□□ -1.88
YRB1	YDR002W	VPS53	P47061	822 aa		3.3	□□□□□ -1.88
YRB1	YDR002W	HMI1	Q12039	706 aa		3.3	□□□□□ -1.88
YRB1	YDR002W	EMC1	P25574	760 aa		3.29	□□□□□ -1.88
YRB1	YDR002W	CPS1	P27614	576 aa		3.29	□□□□□ -1.88
YRB1	YDR002W	TNA1	P53322	534 aa		3.29	□□□□□ -1.88
YRB1	YDR002W	NOG1	Q02892	647 aa	Known RBP	3.29	□□□□□ -1.88
YRB1	YDR002W	BSC2	Q05611	235 aa		3.29	□□□□□ -1.88
YRB1	YDR002W	RFC5	P38251	354 aa		3.28	□□□□□ -1.88
YRB1	YDR002W	PLB1	P39105	664 aa		3.28	□□□□□ -1.88
YRB1	YDR002W	SIP5	P40210	489 aa	Known RBP	3.28	□□□□□ -1.88
YRB1	YDR002W	GTF1	P53260	183 aa	Predicted RBP	3.28	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms