RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	ECM4	P36156	370 aa		4.4	□□□□□ -1.71
VMA1	YDL185W	AIM20	P40451	204 aa		4.4	□□□□□ -1.71
VMA1	YDL185W	BUD6	P41697	788 aa		4.4	□□□□□ -1.71
VMA1	YDL185W	MDJ2	P42834	146 aa		4.4	□□□□□ -1.71
VMA1	YDL185W	PCL10	P53124	433 aa		4.4	□□□□□ -1.71
VMA1	YDL185W	MAM3	Q12296	706 aa		4.4	□□□□□ -1.71
VMA1	YDL185W	ARG4	P04076	463 aa	Predicted RBP	4.4	□□□□□ -1.71
VMA1	YDL185W	EFM2	P38347	419 aa		4.4	□□□□□ -1.71
VMA1	YDL185W	BEM4	P39011	633 aa		4.4	□□□□□ -1.71
VMA1	YDL185W	EPS1	P40557	701 aa		4.4	□□□□□ -1.71
VMA1	YDL185W	AXL1	P40851	1208 aa		4.4	□□□□□ -1.71
VMA1	YDL185W	SPR3	P41901	512 aa		4.4	□□□□□ -1.71
VMA1	YDL185W	YKE2	P52553	114 aa		4.4	□□□□□ -1.71
VMA1	YDL185W	TAF9	Q05027	157 aa		4.4	□□□□□ -1.71
VMA1	YDL185W	PYC1	P11154	1178 aa	Known RBP	4.39	□□□□□ -1.71
VMA1	YDL185W	TUP1	P16649	713 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	VAN1	P23642	535 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	YET1	P35723	206 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	SHQ1	P40486	507 aa	Predicted RBP	4.39	□□□□□ -1.71
VMA1	YDL185W	TFG1	P41895	735 aa	Predicted RBP	4.39	□□□□□ -1.71
VMA1	YDL185W	YRB1	P41920	201 aa	Known RBP	4.39	□□□□□ -1.71
VMA1	YDL185W	PKH3	Q03306	898 aa	Predicted RBP	4.39	□□□□□ -1.71
VMA1	YDL185W	KRE28	Q04431	385 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	DCS2	Q12123	353 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	SAC3	P46674	1301 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	JIP3	O13555	125 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	CDC8	P00572	216 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	SCJ1	P25303	377 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	SEC8	P32855	1065 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	LHS1	P36016	881 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	ARI1	P53111	347 aa	Known RBP	4.39	□□□□□ -1.71
VMA1	YDL185W	MLC1	P53141	149 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	ZDS2	P54786	942 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	YLR001C	Q07895	862 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	MET7	Q08645	548 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	OSW1	Q08692	278 aa		4.39	□□□□□ -1.71
VMA1	YDL185W	RGP1	P16664	663 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	SPO12	P17123	173 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	NPL4	P33755	580 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	SRL3	P36167	246 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	EPL1	P43572	832 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	GFD1	Q04839	188 aa	Known RBP	4.38	□□□□□ -1.71
VMA1	YDL185W	SPO11	P23179	398 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	LAS1	P36146	502 aa	Predicted RBP	4.38	□□□□□ -1.71
VMA1	YDL185W	GVP36	P40531	326 aa	Known RBP	4.38	□□□□□ -1.71
VMA1	YDL185W	TMA22	P47089	198 aa	Predicted RBP	4.38	□□□□□ -1.71
VMA1	YDL185W	ORM1	P53224	222 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	YNR021W	P53723	404 aa	Known RBP	4.38	□□□□□ -1.71
VMA1	YDL185W	POB3	Q04636	552 aa	Known RBP	4.38	□□□□□ -1.71
VMA1	YDL185W	HCR1	Q05775	265 aa	Known RBP	4.38	□□□□□ -1.71
VMA1	YDL185W	NOB1	Q08444	459 aa	Known RBP	4.38	□□□□□ -1.71
VMA1	YDL185W	GNT1	Q12096	491 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	NCB2	Q92317	146 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	MTF2	P10849	440 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	FZO1	P38297	855 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	STM1	P39015	273 aa	Known RBP	4.38	□□□□□ -1.71
VMA1	YDL185W	ZPR1	P53303	486 aa	Known RBP	4.38	□□□□□ -1.71
VMA1	YDL185W	TRS120	Q04183	1289 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	MMR1	Q06324	491 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	BDF2	Q07442	638 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	IOC2	Q12072	812 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	OCA6	Q12454	224 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	NKP1	Q12493	238 aa		4.38	□□□□□ -1.71
VMA1	YDL185W	FAS2	P19097	1887 aa	Known RBP	4.37	□□□□□ -1.71
VMA1	YDL185W	HXK1	P04806	485 aa	Known RBP	4.37	□□□□□ -1.71
VMA1	YDL185W	RPL22A	P05749	121 aa	Known RBP	4.37	□□□□□ -1.71
VMA1	YDL185W	LPD1	P09624	499 aa	Known RBP	4.37	□□□□□ -1.71
VMA1	YDL185W	CDC48	P25694	835 aa	Known RBP	4.37	□□□□□ -1.71
VMA1	YDL185W	GCG1	P32656	232 aa	Known RBP	4.37	□□□□□ -1.71
VMA1	YDL185W	YBR062C	P38239	180 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	LIN1	P38852	340 aa	Predicted RBP	4.37	□□□□□ -1.71
VMA1	YDL185W	VID27	P40157	782 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	LEM3	P42838	414 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	YFR006W	P43590	535 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	HFM1	P51979	1187 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	CUE3	P53137	624 aa	Known RBP	4.37	□□□□□ -1.71
VMA1	YDL185W	ASI1	P54074	624 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	GTR1	Q00582	310 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	SPC24	Q04477	213 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	RSF2	P46974	1380 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	PRP4	P20053	465 aa	Known RBP	4.37	□□□□□ -1.71
VMA1	YDL185W	DIT2	P21595	489 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	URA1	P28272	314 aa	Predicted RBP	4.37	□□□□□ -1.71
VMA1	YDL185W	BUD2	P33314	1104 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
VMA1	YDL185W	GUA1	P38625	525 aa	Known RBP	4.37	□□□□□ -1.71
VMA1	YDL185W	YMR124W	P39523	943 aa	Known RBP	4.37	□□□□□ -1.71
VMA1	YDL185W	UBP12	P39538	1254 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	NUP60	P39705	539 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	HXT10	P43581	546 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	YGR237C	P50089	785 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	ERP6	P53198	216 aa		4.37	□□□□□ -1.71
VMA1	YDL185W	CDC3	P32457	520 aa	Known RBP	4.36	□□□□□ -1.71
VMA1	YDL185W	NIP1	P32497	812 aa	Known RBP	4.36	□□□□□ -1.71
VMA1	YDL185W	OAF3	P36023	863 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	EXO84	P38261	753 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	TDA3	P38758	523 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	CTM1	P38818	585 aa		4.36	□□□□□ -1.71
VMA1	YDL185W	SUB1	P54000	292 aa	Known RBP	4.36	□□□□□ -1.71
VMA1	YDL185W	PIG1	Q06216	648 aa		4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms