RNA–Protein interactions for RNA: YDL110C

TMA17, Transcript of ATPase dedicated chaperone that adapts proteasome assembly to stress, yeast

Gene TMA17, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA17	YDL110C	MAK31	P23059	88 aa		4.81	□□□□□ -1.64
TMA17	YDL110C	RPL8B	P29453	256 aa	Known RBP	4.81	□□□□□ -1.64
TMA17	YDL110C	MCM4	P30665	933 aa	Known RBP	4.81	□□□□□ -1.64
TMA17	YDL110C	TIM23	P32897	222 aa		4.81	□□□□□ -1.64
TMA17	YDL110C	TFC4	P33339	1025 aa		4.81	□□□□□ -1.64
TMA17	YDL110C	RER2	P35196	286 aa		4.81	□□□□□ -1.64
TMA17	YDL110C	VPS53	P47061	822 aa		4.81	□□□□□ -1.64
TMA17	YDL110C	SPN1	Q06505	410 aa	Predicted RBP	4.81	□□□□□ -1.64
TMA17	YDL110C	RKM4	Q12504	494 aa		4.81	□□□□□ -1.64
TMA17	YDL110C	MYO1	P08964	1928 aa		4.8	□□□□□ -1.64
TMA17	YDL110C	YMR084W	A2P2R3	262 aa		4.8	□□□□□ -1.64
TMA17	YDL110C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
TMA17	YDL110C	GPT2	P36148	743 aa		4.8	□□□□□ -1.64
TMA17	YDL110C	REG2	P38232	338 aa		4.8	□□□□□ -1.64
TMA17	YDL110C	CIC1	P38779	376 aa	Known RBP	4.8	□□□□□ -1.64
TMA17	YDL110C	FMS1	P50264	508 aa		4.8	□□□□□ -1.64
TMA17	YDL110C	PTA1	Q01329	785 aa	Predicted RBP	4.8	□□□□□ -1.64
TMA17	YDL110C	VPS72	Q03388	795 aa		4.8	□□□□□ -1.64
TMA17	YDL110C	ISA1	Q07821	250 aa	Predicted RBP	4.8	□□□□□ -1.64
TMA17	YDL110C	ISW2	Q08773	1120 aa		4.8	□□□□□ -1.64
TMA17	YDL110C	CLF1	Q12309	687 aa	Predicted RBP	4.8	□□□□□ -1.64
TMA17	YDL110C	PGA3	Q12746	312 aa	Known RBP	4.8	□□□□□ -1.64
TMA17	YDL110C	YOR111W	Q99210	232 aa		4.8	□□□□□ -1.64
TMA17	YDL110C	VAS1	P07806	1104 aa	Known RBP	4.79	□□□□□ -1.64
TMA17	YDL110C	MAS2	P11914	482 aa		4.79	□□□□□ -1.64
TMA17	YDL110C	IMP2'	P32351	346 aa		4.79	□□□□□ -1.64
TMA17	YDL110C	UGA4	P32837	571 aa		4.79	□□□□□ -1.64
TMA17	YDL110C	MSC7	P38694	644 aa		4.79	□□□□□ -1.64
TMA17	YDL110C	RPS7B	P48164	190 aa	Known RBP	4.79	□□□□□ -1.64
TMA17	YDL110C	FOL2	P51601	243 aa	Known RBP	4.79	□□□□□ -1.64
TMA17	YDL110C	LIF1	P53150	421 aa		4.79	□□□□□ -1.64
TMA17	YDL110C	MDM1	Q01846	1127 aa		4.79	□□□□□ -1.64
TMA17	YDL110C	ECM16	Q04217	1267 aa	Known RBP	4.79	□□□□□ -1.64
TMA17	YDL110C	YLR326W	Q06170	240 aa	Known RBP	4.79	□□□□□ -1.64
TMA17	YDL110C	RTP1	Q12751	981 aa		4.79	□□□□□ -1.64
TMA17	YDL110C	MOT1	P32333	1867 aa		4.79	□□□□□ -1.64
TMA17	YDL110C	UBR2	Q07963	1872 aa		4.78	□□□□□ -1.64
TMA17	YDL110C	HEM1	P09950	548 aa	Predicted RBP	4.78	□□□□□ -1.64
TMA17	YDL110C	PEP3	P27801	918 aa		4.78	□□□□□ -1.64
TMA17	YDL110C	SEC8	P32855	1065 aa		4.78	□□□□□ -1.64
TMA17	YDL110C	LSB1	P53281	241 aa		4.78	□□□□□ -1.64
TMA17	YDL110C	DSE3	Q08729	430 aa		4.78	□□□□□ -1.64
TMA17	YDL110C	SNA3	P14359	133 aa		4.77	□□□□□ -1.65
TMA17	YDL110C	RNR3	P21672	869 aa	Known RBP	4.77	□□□□□ -1.65
TMA17	YDL110C	CAD1	P24813	409 aa	Known RBP	4.77	□□□□□ -1.65
TMA17	YDL110C	KIN82	P25341	720 aa		4.77	□□□□□ -1.65
TMA17	YDL110C	AVT3	P36062	692 aa		4.77	□□□□□ -1.65
TMA17	YDL110C	BRN1	P38170	754 aa		4.77	□□□□□ -1.65
TMA17	YDL110C	BRL1	P38770	471 aa		4.77	□□□□□ -1.65
TMA17	YDL110C	PAN5	P38787	379 aa		4.77	□□□□□ -1.65
TMA17	YDL110C	SGM1	P47166	707 aa		4.77	□□□□□ -1.65
TMA17	YDL110C	HXT17	P53631	564 aa		4.77	□□□□□ -1.65
TMA17	YDL110C	YNL115C	P53925	644 aa		4.77	□□□□□ -1.65
TMA17	YDL110C	ECM23	Q02710	187 aa		4.77	□□□□□ -1.65
TMA17	YDL110C	EST2	Q06163	884 aa		4.77	□□□□□ -1.65
TMA17	YDL110C	FPR4	Q06205	392 aa	Predicted RBP	4.77	□□□□□ -1.65
TMA17	YDL110C	VIP1	Q06685	1146 aa	Known RBP	4.77	□□□□□ -1.65
TMA17	YDL110C	WHI4	Q07655	649 aa	Known RBP	4.77	□□□□□ -1.65
TMA17	YDL110C	TY1B-A	O13527	1196 aa	Known RBP	4.76	□□□□□ -1.65
TMA17	YDL110C	SEC20	P28791	383 aa		4.76	□□□□□ -1.65
TMA17	YDL110C	DUR3	P33413	735 aa		4.76	□□□□□ -1.65
TMA17	YDL110C	TVP23	P38962	199 aa		4.76	□□□□□ -1.65
TMA17	YDL110C	AZR1	P50080	613 aa		4.76	□□□□□ -1.65
TMA17	YDL110C	ASE1	P50275	885 aa		4.76	□□□□□ -1.65
TMA17	YDL110C	MSC2	Q03455	724 aa		4.76	□□□□□ -1.65
TMA17	YDL110C	ESF1	Q06344	628 aa	Known RBP	4.76	□□□□□ -1.65
TMA17	YDL110C	ATG11	Q12527	1178 aa		4.76	□□□□□ -1.65
TMA17	YDL110C	RPL8A	P17076	256 aa	Known RBP	4.75	□□□□□ -1.65
TMA17	YDL110C	POA1	P38218	177 aa		4.75	□□□□□ -1.65
TMA17	YDL110C	SUL1	P38359	859 aa		4.75	□□□□□ -1.65
TMA17	YDL110C	HXT13	P39924	564 aa		4.75	□□□□□ -1.65
TMA17	YDL110C	INP51	P40559	946 aa	Known RBP	4.75	□□□□□ -1.65
TMA17	YDL110C	RSC8	P43609	557 aa	Known RBP	4.75	□□□□□ -1.65
TMA17	YDL110C	ALG2	P43636	503 aa		4.75	□□□□□ -1.65
TMA17	YDL110C	CIT1	P00890	479 aa		4.74	□□□□□ -1.65
TMA17	YDL110C	YHR131C	P38835	850 aa		4.74	□□□□□ -1.65
TMA17	YDL110C	AKR1	P39010	764 aa		4.74	□□□□□ -1.65
TMA17	YDL110C	JHD1	P40034	492 aa		4.74	□□□□□ -1.65
TMA17	YDL110C	AIM9	P40053	627 aa	Known RBP	4.74	□□□□□ -1.65
TMA17	YDL110C	TPM2	P40414	161 aa		4.74	□□□□□ -1.65
TMA17	YDL110C	SAD1	P43589	448 aa		4.74	□□□□□ -1.65
TMA17	YDL110C	UBP15	P50101	1230 aa		4.74	□□□□□ -1.65
TMA17	YDL110C	GCR2	Q01722	534 aa		4.74	□□□□□ -1.65
TMA17	YDL110C	OXR1	Q08952	273 aa		4.74	□□□□□ -1.65
TMA17	YDL110C	YLL058W	Q12198	575 aa		4.74	□□□□□ -1.65
TMA17	YDL110C	ARP6	Q12509	438 aa		4.74	□□□□□ -1.65
TMA17	YDL110C	FKS1	P38631	1876 aa	Known RBP	4.74	□□□□□ -1.65
TMA17	YDL110C	RIF1	P29539	1916 aa		4.74	□□□□□ -1.65
TMA17	YDL110C	MET6	P05694	767 aa	Known RBP	4.73	□□□□□ -1.65
TMA17	YDL110C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
TMA17	YDL110C	TPM1	P17536	199 aa	Known RBP	4.73	□□□□□ -1.65
TMA17	YDL110C	CLB5	P30283	435 aa		4.73	□□□□□ -1.65
TMA17	YDL110C	IRE1	P32361	1115 aa		4.73	□□□□□ -1.65
TMA17	YDL110C	UBP11	P36026	717 aa		4.73	□□□□□ -1.65
TMA17	YDL110C	OYE2	Q03558	400 aa	Known RBP	4.73	□□□□□ -1.65
TMA17	YDL110C	YML020W	Q03722	664 aa		4.73	□□□□□ -1.65
TMA17	YDL110C	YDR341C	Q05506	607 aa	Known RBP	4.73	□□□□□ -1.65
TMA17	YDL110C	MAK11	P20484	414 aa	Known RBP	4.72	□□□□□ -1.65
TMA17	YDL110C	AFT1	P22149	690 aa		4.72	□□□□□ -1.65
TMA17	YDL110C	ESS1	P22696	170 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms