RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene RXT3, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RXT3YDL076C TRS120Q04183 1289 aa5.59□□□□□ -1.51
RXT3YDL076C SVF1Q05515 481 aa5.59□□□□□ -1.51
RXT3YDL076C CTI6Q08923 506 aa5.59□□□□□ -1.51
RXT3YDL076C DAL1P32375 460 aa5.58□□□□□ -1.52
RXT3YDL076C SEC8P32855 1065 aa5.58□□□□□ -1.52
RXT3YDL076C UFD2P54860 961 aa5.58□□□□□ -1.52
RXT3YDL076C RIX7Q07844 837 aaKnown RBP5.58□□□□□ -1.52
RXT3YDL076C AUS1Q08409 1394 aa5.57□□□□□ -1.52
RXT3YDL076C NUP145P49687 1317 aa5.57□□□□□ -1.52
RXT3YDL076C TOP1P04786 769 aa5.57□□□□□ -1.52
RXT3YDL076C MCM1P11746 286 aa5.57□□□□□ -1.52
RXT3YDL076C RPB10P22139 70 aa5.57□□□□□ -1.52
RXT3YDL076C YCK2P23292 546 aaKnown RBP5.57□□□□□ -1.52
RXT3YDL076C MET4P32389 672 aa5.57□□□□□ -1.52
RXT3YDL076C AKL1P38080 1108 aaKnown RBP5.57□□□□□ -1.52
RXT3YDL076C UTP7P40055 554 aaKnown RBP5.57□□□□□ -1.52
RXT3YDL076C NSE3Q05541 303 aa5.57□□□□□ -1.52
RXT3YDL076C SSP2Q08646 371 aa5.57□□□□□ -1.52
RXT3YDL076C SCD5P34758 872 aa5.56□□□□□ -1.52
RXT3YDL076C MCX1P38323 520 aaPredicted RBP5.56□□□□□ -1.52
RXT3YDL076C SUT1P53032 299 aaKnown RBP5.56□□□□□ -1.52
RXT3YDL076C KIN4Q01919 800 aa5.56□□□□□ -1.52
RXT3YDL076C BDF2Q07442 638 aa5.56□□□□□ -1.52
RXT3YDL076C STB3Q12427 513 aa5.56□□□□□ -1.52
RXT3YDL076C YKU70P32807 602 aa5.55□□□□□ -1.52
RXT3YDL076C MAC1P35192 417 aa5.55□□□□□ -1.52
RXT3YDL076C SHC1P39000 512 aa5.55□□□□□ -1.52
RXT3YDL076C SUM1P46676 1062 aa5.55□□□□□ -1.52
RXT3YDL076C YJR107WP47145 328 aa5.55□□□□□ -1.52
RXT3YDL076C MCA1Q08601 432 aa5.55□□□□□ -1.52
RXT3YDL076C APC11Q12157 165 aa5.55□□□□□ -1.52
RXT3YDL076C GRX6Q12438 231 aa5.55□□□□□ -1.52
RXT3YDL076C MRPL33P20084 86 aa5.54□□□□□ -1.52
RXT3YDL076C RET1P22276 1149 aaKnown RBP5.54□□□□□ -1.52
RXT3YDL076C MSM1P22438 575 aa5.54□□□□□ -1.52
RXT3YDL076C SMY1P32364 656 aaKnown RBP5.54□□□□□ -1.52
RXT3YDL076C MET1P36150 593 aa5.54□□□□□ -1.52
RXT3YDL076C AMN1P38285 549 aaPredicted RBP5.54□□□□□ -1.52
RXT3YDL076C HXT5P38695 592 aa5.54□□□□□ -1.52
RXT3YDL076C UBP15P50101 1230 aa5.54□□□□□ -1.52
RXT3YDL076C YGL082WP53155 381 aa5.54□□□□□ -1.52
RXT3YDL076C ERO1Q03103 563 aa5.54□□□□□ -1.52
RXT3YDL076C YDR461C-AQ2V2P7 80 aa5.54□□□□□ -1.52
RXT3YDL076C THS1P04801 734 aaKnown RBP5.53□□□□□ -1.52
RXT3YDL076C GCD6P32501 712 aaKnown RBP5.53□□□□□ -1.52
RXT3YDL076C RPT1P33299 467 aaKnown RBP5.53□□□□□ -1.52
RXT3YDL076C SLN1P39928 1220 aaPredicted RBP5.53□□□□□ -1.52
RXT3YDL076C BOI2P39969 1040 aa5.53□□□□□ -1.52
RXT3YDL076C JIP5Q06214 492 aaPredicted RBP5.53□□□□□ -1.52
RXT3YDL076C YPQ2Q06328 317 aa5.53□□□□□ -1.52
RXT3YDL076C ALE1Q08548 619 aa5.53□□□□□ -1.52
RXT3YDL076C YDR215CQ12240 137 aa5.53□□□□□ -1.52
RXT3YDL076C ICL1P28240 557 aaPredicted RBP5.52□□□□□ -1.53
RXT3YDL076C ALA1P40825 983 aaKnown RBP5.52□□□□□ -1.53
RXT3YDL076C PHO4P07270 312 aaKnown RBP5.51□□□□□ -1.53
RXT3YDL076C SMC1P32908 1225 aa5.51□□□□□ -1.53
RXT3YDL076C GPI13Q07830 1017 aa5.51□□□□□ -1.53
RXT3YDL076C FYV10P40492 516 aa5.5□□□□□ -1.53
RXT3YDL076C LSB6P42951 607 aa5.5□□□□□ -1.53
RXT3YDL076C VMA3P25515 160 aa5.49□□□□□ -1.53
RXT3YDL076C LDH1P38139 375 aa5.49□□□□□ -1.53
RXT3YDL076C HXT8P40886 569 aa5.49□□□□□ -1.53
RXT3YDL076C SAM37P50110 327 aa5.49□□□□□ -1.53
RXT3YDL076C ZDS1P50111 915 aaKnown RBP5.49□□□□□ -1.53
RXT3YDL076C YNL050CP53952 270 aa5.49□□□□□ -1.53
RXT3YDL076C YNL011CP53980 444 aa5.49□□□□□ -1.53
RXT3YDL076C CDC55Q00362 526 aa5.49□□□□□ -1.53
RXT3YDL076C UTP4Q06679 776 aaKnown RBP5.49□□□□□ -1.53
RXT3YDL076C MNL2Q12205 849 aa5.49□□□□□ -1.53
RXT3YDL076C Q0182Q9ZZW1 134 aa5.49□□□□□ -1.53
RXT3YDL076C MCM2P29469 868 aa5.48□□□□□ -1.53
RXT3YDL076C KTR2P33550 425 aa5.48□□□□□ -1.53
RXT3YDL076C VPS35P34110 944 aa5.48□□□□□ -1.53
RXT3YDL076C CIC1P38779 376 aaKnown RBP5.48□□□□□ -1.53
RXT3YDL076C DYS1P38791 387 aa5.48□□□□□ -1.53
RXT3YDL076C MAM1P40065 302 aa5.48□□□□□ -1.53
RXT3YDL076C DAK2P43550 591 aa5.48□□□□□ -1.53
RXT3YDL076C TIM50Q02776 476 aa5.48□□□□□ -1.53
RXT3YDL076C PKH1Q03407 766 aa5.48□□□□□ -1.53
RXT3YDL076C SYF1Q04048 859 aaPredicted RBP5.48□□□□□ -1.53
RXT3YDL076C CRF1Q04930 467 aa5.48□□□□□ -1.53
RXT3YDL076C OXR1Q08952 273 aa5.48□□□□□ -1.53
RXT3YDL076C GPM1P00950 247 aaKnown RBP5.47□□□□□ -1.53
RXT3YDL076C PEP7P32609 515 aa5.47□□□□□ -1.53
RXT3YDL076C FRD1P32614 470 aaKnown RBP5.47□□□□□ -1.53
RXT3YDL076C TAT1P38085 619 aa5.47□□□□□ -1.53
RXT3YDL076C FIR1P40020 876 aa5.47□□□□□ -1.53
RXT3YDL076C YTA6P40328 754 aa5.47□□□□□ -1.53
RXT3YDL076C NNF1P47149 201 aa5.47□□□□□ -1.53
RXT3YDL076C DUS1P53759 423 aaKnown RBP5.47□□□□□ -1.53
RXT3YDL076C UBX2Q04228 584 aa5.47□□□□□ -1.53
RXT3YDL076C TY1A-DR3Q12441 440 aa5.47□□□□□ -1.53
RXT3YDL076C SSK22P25390 1331 aaPredicted RBP5.47□□□□□ -1.53
RXT3YDL076C MLF3P32047 452 aa5.46□□□□□ -1.54
RXT3YDL076C SLA1P32790 1244 aa5.46□□□□□ -1.54
RXT3YDL076C RAD55P38953 406 aa5.46□□□□□ -1.54
RXT3YDL076C RTR1P40084 226 aaPredicted RBP5.46□□□□□ -1.54
RXT3YDL076C QDR2P40474 542 aa5.46□□□□□ -1.54
RXT3YDL076C MAD1P40957 749 aa5.46□□□□□ -1.54
RXT3YDL076C VPS64Q03944 604 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms