RNA–Protein interactions for RNA: YCR017C

CWH43, Transcript of Putative sensor/transporter protein involved in cell wall biogenesis, yeast

Gene CWH43, Length 2,862 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWH43	YCR017C	MDM20	Q12387	796 aa	Known RBP	4.6	□□□□□ -1.67
CWH43	YCR017C	KEX1	P09620	729 aa		4.6	□□□□□ -1.67
CWH43	YCR017C	RME1	P32338	300 aa	Known RBP	4.6	□□□□□ -1.67
CWH43	YCR017C	ANP1	P32629	500 aa		4.6	□□□□□ -1.67
CWH43	YCR017C	PNT1	P38969	423 aa		4.6	□□□□□ -1.67
CWH43	YCR017C	VID27	P40157	782 aa		4.6	□□□□□ -1.67
CWH43	YCR017C	REF2	P42073	533 aa	Predicted RBP	4.6	□□□□□ -1.67
CWH43	YCR017C	FOL1	P53848	824 aa		4.6	□□□□□ -1.67
CWH43	YCR017C	NUC1	P08466	329 aa		4.59	□□□□□ -1.67
CWH43	YCR017C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
CWH43	YCR017C	PAH1	P32567	862 aa		4.59	□□□□□ -1.67
CWH43	YCR017C	GPT2	P36148	743 aa		4.59	□□□□□ -1.67
CWH43	YCR017C	AAP1	P37898	856 aa	Known RBP	4.59	□□□□□ -1.67
CWH43	YCR017C	VPS53	P47061	822 aa		4.59	□□□□□ -1.67
CWH43	YCR017C	ATG1	P53104	897 aa		4.59	□□□□□ -1.67
CWH43	YCR017C	ECM23	Q02710	187 aa		4.59	□□□□□ -1.67
CWH43	YCR017C	RAD54	P32863	898 aa		4.59	□□□□□ -1.67
CWH43	YCR017C	BUD2	P33314	1104 aa		4.59	□□□□□ -1.67
CWH43	YCR017C	RFC1	P38630	861 aa	Known RBP	4.59	□□□□□ -1.67
CWH43	YCR017C	KIC1	P38692	1080 aa		4.59	□□□□□ -1.67
CWH43	YCR017C	VPS8	P39702	1274 aa		4.59	□□□□□ -1.67
CWH43	YCR017C	GCR2	Q01722	534 aa		4.59	□□□□□ -1.67
CWH43	YCR017C	FPR4	Q06205	392 aa	Predicted RBP	4.59	□□□□□ -1.67
CWH43	YCR017C	RPP1B	P10622	106 aa	Known RBP	4.59	□□□□□ -1.68
CWH43	YCR017C	RNR3	P21672	869 aa	Known RBP	4.59	□□□□□ -1.68
CWH43	YCR017C	PEP3	P27801	918 aa		4.59	□□□□□ -1.68
CWH43	YCR017C	CCT3	P39077	534 aa	Known RBP	4.59	□□□□□ -1.68
CWH43	YCR017C	HMF1	P40037	129 aa	Known RBP	4.59	□□□□□ -1.68
CWH43	YCR017C	PSF2	P40359	213 aa		4.59	□□□□□ -1.68
CWH43	YCR017C	LDH1	P38139	375 aa		4.58	□□□□□ -1.68
CWH43	YCR017C	RPT6	Q01939	405 aa	Known RBP	4.58	□□□□□ -1.68
CWH43	YCR017C	VIP1	Q06685	1146 aa	Known RBP	4.58	□□□□□ -1.68
CWH43	YCR017C	CEX1	Q12453	761 aa		4.58	□□□□□ -1.68
CWH43	YCR017C	RLF2	Q12495	606 aa		4.58	□□□□□ -1.68
CWH43	YCR017C	RAD18	P10862	487 aa		4.58	□□□□□ -1.68
CWH43	YCR017C	SLA1	P32790	1244 aa		4.58	□□□□□ -1.68
CWH43	YCR017C	ELP4	Q02884	456 aa	Known RBP	4.58	□□□□□ -1.68
CWH43	YCR017C	YLR326W	Q06170	240 aa	Known RBP	4.58	□□□□□ -1.68
CWH43	YCR017C	PSK2	Q08217	1101 aa		4.58	□□□□□ -1.68
CWH43	YCR017C	VAS1	P07806	1104 aa	Known RBP	4.57	□□□□□ -1.68
CWH43	YCR017C	CHL1	P22516	861 aa	Predicted RBP	4.57	□□□□□ -1.68
CWH43	YCR017C	MAK31	P23059	88 aa		4.57	□□□□□ -1.68
CWH43	YCR017C	MCM4	P30665	933 aa	Known RBP	4.57	□□□□□ -1.68
CWH43	YCR017C	BMH2	P34730	273 aa	Known RBP	4.57	□□□□□ -1.68
CWH43	YCR017C	PRE3	P38624	215 aa		4.57	□□□□□ -1.68
CWH43	YCR017C	YMR147W	P40218	223 aa	Known RBP	4.57	□□□□□ -1.68
CWH43	YCR017C	NAF1	P53919	492 aa	Known RBP	4.57	□□□□□ -1.68
CWH43	YCR017C	GDE1	Q02979	1223 aa		4.57	□□□□□ -1.68
CWH43	YCR017C	CSC1	Q06538	782 aa		4.57	□□□□□ -1.68
CWH43	YCR017C	LAP2	Q10740	671 aa		4.57	□□□□□ -1.68
CWH43	YCR017C	CBP3	P21560	335 aa		4.57	□□□□□ -1.68
CWH43	YCR017C	UGA4	P32837	571 aa		4.57	□□□□□ -1.68
CWH43	YCR017C	MAL31	P38156	614 aa		4.57	□□□□□ -1.68
CWH43	YCR017C	MID1	P41821	548 aa		4.57	□□□□□ -1.68
CWH43	YCR017C	VPS62	P53285	467 aa		4.57	□□□□□ -1.68
CWH43	YCR017C	CNM67	P53865	581 aa	Known RBP	4.57	□□□□□ -1.68
CWH43	YCR017C	MDM1	Q01846	1127 aa		4.57	□□□□□ -1.68
CWH43	YCR017C	ULP1	Q02724	621 aa		4.57	□□□□□ -1.68
CWH43	YCR017C	RER2	P35196	286 aa		4.56	□□□□□ -1.68
CWH43	YCR017C	UBP14	P38237	781 aa	Known RBP	4.56	□□□□□ -1.68
CWH43	YCR017C	PHO88	P38264	188 aa	Predicted RBP	4.56	□□□□□ -1.68
CWH43	YCR017C	KSP1	P38691	1029 aa	Known RBP	4.56	□□□□□ -1.68
CWH43	YCR017C	SNF7	P39929	240 aa	Known RBP	4.56	□□□□□ -1.68
CWH43	YCR017C	YJL007C	P47080	104 aa		4.56	□□□□□ -1.68
CWH43	YCR017C	YPL034W	Q03083	165 aa		4.56	□□□□□ -1.68
CWH43	YCR017C	OYE2	Q03558	400 aa	Known RBP	4.56	□□□□□ -1.68
CWH43	YCR017C	EST2	Q06163	884 aa		4.56	□□□□□ -1.68
CWH43	YCR017C	RPL8B	P29453	256 aa	Known RBP	4.56	□□□□□ -1.68
CWH43	YCR017C	TFC4	P33339	1025 aa		4.56	□□□□□ -1.68
CWH43	YCR017C	MCR1	P36060	302 aa	Known RBP	4.56	□□□□□ -1.68
CWH43	YCR017C	MSC7	P38694	644 aa		4.56	□□□□□ -1.68
CWH43	YCR017C	FIR1	P40020	876 aa		4.56	□□□□□ -1.68
CWH43	YCR017C	ROG3	P43602	733 aa		4.56	□□□□□ -1.68
CWH43	YCR017C	VPS30	Q02948	557 aa		4.56	□□□□□ -1.68
CWH43	YCR017C	FBP1	P09201	348 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	SRS2	P12954	1174 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	RIT1	P23796	513 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	POA1	P38218	177 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	YHL017W	P38745	532 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	CLA4	P48562	842 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	PTA1	Q01329	785 aa	Predicted RBP	4.55	□□□□□ -1.68
CWH43	YCR017C	DSE3	Q08729	430 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	RNR2	P09938	399 aa	Known RBP	4.55	□□□□□ -1.68
CWH43	YCR017C	MATALPHA2	P0CY08	210 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	HMLALPHA2	P0CY09	210 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	POL3	P15436	1097 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	CHS3	P29465	1165 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	IXR1	P33417	597 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	DSF2	P38213	736 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	AIM9	P40053	627 aa	Known RBP	4.55	□□□□□ -1.68
CWH43	YCR017C	YJR107W	P47145	328 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	ARH1	P48360	493 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	CLB5	P30283	435 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	UTR4	P32626	227 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	YIR014W	P40570	242 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	LIF1	P53150	421 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	MDR1	P53258	950 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	SKY1	Q03656	742 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	TFC6	Q06339	672 aa		4.55	□□□□□ -1.68
CWH43	YCR017C	SRP54	P20424	541 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms