RNA–Protein interactions for RNA: YBR095C

RXT2, Transcript of Component of the histone deacetylase Rpd3L complex, yeast

Gene RXT2, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RXT2	YBR095C	HSE1	P38753	452 aa		5.71	□□□□□ -1.5
RXT2	YBR095C	SHU2	P38957	223 aa		5.71	□□□□□ -1.5
RXT2	YBR095C	GCN5	Q03330	439 aa		5.71	□□□□□ -1.5
RXT2	YBR095C	SGD1	Q06132	899 aa		5.71	□□□□□ -1.5
RXT2	YBR095C	LAM1	P38851	1228 aa		5.7	□□□□□ -1.5
RXT2	YBR095C	SLS1	P42900	643 aa		5.7	□□□□□ -1.5
RXT2	YBR095C	BSC2	Q05611	235 aa		5.7	□□□□□ -1.5
RXT2	YBR095C	MCM5	P29496	775 aa	Known RBP	5.69	□□□□□ -1.5
RXT2	YBR095C	EXO5	P38289	585 aa		5.69	□□□□□ -1.5
RXT2	YBR095C	MEF2	P39677	819 aa		5.69	□□□□□ -1.5
RXT2	YBR095C	RVS167	P39743	482 aa	Known RBP	5.69	□□□□□ -1.5
RXT2	YBR095C	HNT2	P49775	206 aa		5.69	□□□□□ -1.5
RXT2	YBR095C	YNL011C	P53980	444 aa		5.69	□□□□□ -1.5
RXT2	YBR095C	YML122C	Q03207	126 aa		5.69	□□□□□ -1.5
RXT2	YBR095C	DOM34	P33309	386 aa		5.68	□□□□□ -1.5
RXT2	YBR095C	SLI1	P53304	468 aa		5.68	□□□□□ -1.5
RXT2	YBR095C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	RIP-Chip
RXT2	YBR095C	RSA3	Q05942	220 aa	Known RBP	5.68	□□□□□ -1.5
RXT2	YBR095C	NBA1	Q08229	501 aa	Known RBP	5.68	□□□□□ -1.5
RXT2	YBR095C	SPS1	P08458	490 aa		5.67	□□□□□ -1.5
RXT2	YBR095C	GLO3	P38682	493 aa	Known RBP	5.67	□□□□□ -1.5
RXT2	YBR095C	NEM1	P38757	446 aa		5.67	□□□□□ -1.5
RXT2	YBR095C	RSC58	Q07979	502 aa		5.67	□□□□□ -1.5
RXT2	YBR095C	LAP2	Q10740	671 aa		5.67	□□□□□ -1.5
RXT2	YBR095C	MTR4	P47047	1073 aa	Known RBP	5.66	□□□□□ -1.5
RXT2	YBR095C	YBL113C	Q7M4S9	792 aa		5.66	□□□□□ -1.5
RXT2	YBR095C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.65	□□□□□ -1.5	not detected
RXT2	YBR095C	NMD3	P38861	518 aa	Known RBP	5.65	□□□□□ -1.5
RXT2	YBR095C	CDC55	Q00362	526 aa		5.65	□□□□□ -1.5
RXT2	YBR095C	HCM1	P25364	564 aa		5.64	□□□□□ -1.51
RXT2	YBR095C	GRS1	P38088	690 aa	Known RBP	5.64	□□□□□ -1.51
RXT2	YBR095C	ERP5	P38819	212 aa		5.64	□□□□□ -1.51
RXT2	YBR095C	QDR1	P40475	563 aa		5.64	□□□□□ -1.51
RXT2	YBR095C	CTF4	Q01454	927 aa		5.64	□□□□□ -1.51
RXT2	YBR095C	YML020W	Q03722	664 aa		5.64	□□□□□ -1.51
RXT2	YBR095C	STE11	P23561	717 aa		5.63	□□□□□ -1.51
RXT2	YBR095C	RAD53	P22216	821 aa		5.62	□□□□□ -1.51
RXT2	YBR095C	PMI40	P29952	429 aa	Known RBP	5.62	□□□□□ -1.51
RXT2	YBR095C	SSF1	P38789	453 aa	Predicted RBP	5.62	□□□□□ -1.51
RXT2	YBR095C	NOG1	Q02892	647 aa	Known RBP	5.62	□□□□□ -1.51
RXT2	YBR095C	TRL1	P09880	827 aa	Known RBP	5.61	□□□□□ -1.51
RXT2	YBR095C	YJL045W	P47052	634 aa		5.61	□□□□□ -1.51
RXT2	YBR095C	ATG1	P53104	897 aa		5.61	□□□□□ -1.51
RXT2	YBR095C	UTP5	Q04177	643 aa	Known RBP	5.61	□□□□□ -1.51
RXT2	YBR095C	DUS4	Q06063	367 aa		5.61	□□□□□ -1.51
RXT2	YBR095C	SLD2	P34252	453 aa		5.6	□□□□□ -1.51
RXT2	YBR095C	MNN10	P50108	393 aa	Known RBP	5.6	□□□□□ -1.51
RXT2	YBR095C	SUN4	P53616	420 aa		5.6	□□□□□ -1.51
RXT2	YBR095C	TRS120	Q04183	1289 aa		5.6	□□□□□ -1.51
RXT2	YBR095C	CYC1	P00044	109 aa	Predicted RBP	5.59	□□□□□ -1.51
RXT2	YBR095C	YSC84	P32793	468 aa		5.59	□□□□□ -1.51
RXT2	YBR095C	ATG14	P38270	344 aa		5.59	□□□□□ -1.51
RXT2	YBR095C	SEC26	P41810	973 aa	Known RBP	5.59	□□□□□ -1.51
RXT2	YBR095C	MDJ2	P42834	146 aa		5.59	□□□□□ -1.51
RXT2	YBR095C	ACF4	P47129	309 aa		5.59	□□□□□ -1.51
RXT2	YBR095C	INP54	Q08227	384 aa	Known RBP	5.59	□□□□□ -1.51
RXT2	YBR095C	MNL2	Q12205	849 aa		5.59	□□□□□ -1.51
RXT2	YBR095C	NTO1	Q12311	748 aa		5.59	□□□□□ -1.51
RXT2	YBR095C	QNS1	P38795	714 aa	Known RBP	5.58	□□□□□ -1.52
RXT2	YBR095C	AIM21	P40563	679 aa		5.58	□□□□□ -1.52
RXT2	YBR095C	XKS1	P42826	600 aa		5.57	□□□□□ -1.52
RXT2	YBR095C	MON1	P53129	644 aa		5.57	□□□□□ -1.52
RXT2	YBR095C	COQ4	O13525	335 aa		5.56	□□□□□ -1.52
RXT2	YBR095C	CCZ1	P38273	704 aa		5.56	□□□□□ -1.52
RXT2	YBR095C	YHL050C	P38721	697 aa		5.56	□□□□□ -1.52
RXT2	YBR095C	CHS7	P38843	316 aa		5.56	□□□□□ -1.52
RXT2	YBR095C	YHR219W	P38900	624 aa		5.56	□□□□□ -1.52
RXT2	YBR095C	STM1	P39015	273 aa	Known RBP	5.56	□□□□□ -1.52
RXT2	YBR095C	VPS53	P47061	822 aa		5.56	□□□□□ -1.52
RXT2	YBR095C	VMA4	P22203	233 aa	Known RBP	5.55	□□□□□ -1.52
RXT2	YBR095C	MCM6	P53091	1017 aa	Known RBP	5.55	□□□□□ -1.52
RXT2	YBR095C	ROT1	Q03691	256 aa		5.55	□□□□□ -1.52
RXT2	YBR095C	RXT3	Q07458	294 aa		5.55	□□□□□ -1.52
RXT2	YBR095C	CDC20	P26309	610 aa		5.54	□□□□□ -1.52
RXT2	YBR095C	LST4	P34239	828 aa		5.54	□□□□□ -1.52
RXT2	YBR095C	THI12	P42883	340 aa		5.54	□□□□□ -1.52
RXT2	YBR095C	THI5	P43534	340 aa		5.54	□□□□□ -1.52
RXT2	YBR095C	THI11	P47183	340 aa		5.54	□□□□□ -1.52
RXT2	YBR095C	RKM2	Q03942	479 aa		5.54	□□□□□ -1.52
RXT2	YBR095C	ACK1	Q07622	623 aa	Predicted RBP	5.54	□□□□□ -1.52
RXT2	YBR095C	THI13	Q07748	340 aa		5.54	□□□□□ -1.52
RXT2	YBR095C	BAP2	P38084	609 aa		5.53	□□□□□ -1.52
RXT2	YBR095C	PLB2	Q03674	706 aa		5.53	□□□□□ -1.52
RXT2	YBR095C	NUT2	Q06213	157 aa		5.53	□□□□□ -1.52
RXT2	YBR095C	NOP8	Q08287	484 aa	Predicted RBP	5.53	□□□□□ -1.52
RXT2	YBR095C	MSC6	Q08818	692 aa	Known RBP	5.53	□□□□□ -1.52
RXT2	YBR095C	FRT1	Q99332	602 aa		5.53	□□□□□ -1.52
RXT2	YBR095C	MSH3	P25336	1018 aa		5.52	□□□□□ -1.53
RXT2	YBR095C	IPL1	P38991	367 aa		5.52	□□□□□ -1.53
RXT2	YBR095C	TMA10	Q06177	86 aa		5.51	□□□□□ -1.53
RXT2	YBR095C	RCL1	Q08096	367 aa	Predicted RBP	5.51	□□□□□ -1.53
RXT2	YBR095C	SEC20	P28791	383 aa		5.5	□□□□□ -1.53
RXT2	YBR095C	YNR063W	P53749	607 aa		5.5	□□□□□ -1.53
RXT2	YBR095C	SEN54	Q02825	467 aa	Predicted RBP	5.5	□□□□□ -1.53
RXT2	YBR095C	YCS4	Q06156	1176 aa		5.5	□□□□□ -1.53
RXT2	YBR095C	NOC3	Q07896	663 aa	Predicted RBP	5.5	□□□□□ -1.53
RXT2	YBR095C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.49	□□□□□ -1.53	not detected
RXT2	YBR095C	PIK1	P39104	1066 aa		5.49	□□□□□ -1.53
RXT2	YBR095C	PBP1	P53297	722 aa	Known RBP	5.49	□□□□□ -1.53
RXT2	YBR095C	TNA1	P53322	534 aa		5.49	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 103 ms