RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C PEX6P33760 1030 aa3.03□□□□□ -1.92
PRP6YBR055C YKL077WP36081 392 aa3.03□□□□□ -1.92
PRP6YBR055C GEM1P39722 662 aa3.03□□□□□ -1.92
PRP6YBR055C YGL176CP46945 554 aa3.03□□□□□ -1.92
PRP6YBR055C PTK2P47116 818 aaKnown RBP3.03□□□□□ -1.92
PRP6YBR055C TIF35Q04067 274 aaKnown RBP3.03□□□□□ -1.92
PRP6YBR055C RSC2Q06488 889 aa3.03□□□□□ -1.92
PRP6YBR055C TMA17Q12513 150 aa3.03□□□□□ -1.92
PRP6YBR055C PRP5P21372 849 aaPredicted RBP3.02□□□□□ -1.93
PRP6YBR055C AFT1P22149 690 aa3.02□□□□□ -1.93
PRP6YBR055C GDH3P39708 457 aa3.02□□□□□ -1.93
PRP6YBR055C YGR237CP50089 785 aa3.02□□□□□ -1.93
PRP6YBR055C UGO1Q03327 502 aa3.02□□□□□ -1.93
PRP6YBR055C EST2Q06163 884 aa3.02□□□□□ -1.93
PRP6YBR055C AOS1Q06624 347 aa3.02□□□□□ -1.93
PRP6YBR055C RKM4Q12504 494 aa3.02□□□□□ -1.93
PRP6YBR055C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
PRP6YBR055C TOM70P07213 617 aaKnown RBP3.02□□□□□ -1.93
PRP6YBR055C SYP1P25623 870 aaKnown RBP3.02□□□□□ -1.93
PRP6YBR055C RDH54P38086 958 aa3.02□□□□□ -1.93
PRP6YBR055C EXO5P38289 585 aa3.02□□□□□ -1.93
PRP6YBR055C DSS1P39112 969 aa3.02□□□□□ -1.93
PRP6YBR055C AIR1P40507 360 aaKnown RBP3.02□□□□□ -1.93
PRP6YBR055C YJR098CP47139 656 aa3.02□□□□□ -1.93
PRP6YBR055C ENT3P47160 408 aa3.02□□□□□ -1.93
PRP6YBR055C ALO1P54783 526 aaKnown RBP3.02□□□□□ -1.93
PRP6YBR055C RAT1Q02792 1006 aaKnown RBP3.02□□□□□ -1.93
PRP6YBR055C GIC2Q06648 383 aa3.02□□□□□ -1.93
PRP6YBR055C YPL066WQ12194 479 aa3.02□□□□□ -1.93
PRP6YBR055C CDC4P07834 779 aa3.01□□□□□ -1.93
PRP6YBR055C TY1A-LR4P0C2I8 440 aaKnown RBP3.01□□□□□ -1.93
PRP6YBR055C TY1A-DR6P0CX70 440 aa3.01□□□□□ -1.93
PRP6YBR055C TY1A-ER1P0CX71 440 aa3.01□□□□□ -1.93
PRP6YBR055C TY1A-LR2P0CX72 440 aa3.01□□□□□ -1.93
PRP6YBR055C TY1A-PLP0CX73 440 aa3.01□□□□□ -1.93
PRP6YBR055C TY1A-JR1P0CX74 440 aa3.01□□□□□ -1.93
PRP6YBR055C TY1A-LR3P0CX75 440 aa3.01□□□□□ -1.93
PRP6YBR055C TY1A-ML2P0CX76 440 aa3.01□□□□□ -1.93
PRP6YBR055C IDI1P15496 288 aa3.01□□□□□ -1.93
PRP6YBR055C PIN4P34217 668 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
PRP6YBR055C MRPL16P38064 232 aa3.01□□□□□ -1.93
PRP6YBR055C PAF1P38351 445 aa3.01□□□□□ -1.93
PRP6YBR055C YER156CP40093 338 aaKnown RBP3.01□□□□□ -1.93
PRP6YBR055C MTR4P47047 1073 aaKnown RBP3.01□□□□□ -1.93
PRP6YBR055C VTC4P47075 721 aa3.01□□□□□ -1.93
PRP6YBR055C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
PRP6YBR055C TY1A-GR1Q12085 440 aa3.01□□□□□ -1.93
PRP6YBR055C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.01□□□□□ -1.93
PRP6YBR055C TY1A-OLQ92392 440 aaKnown RBP3.01□□□□□ -1.93
PRP6YBR055C VMA4P22203 233 aaKnown RBP3.01□□□□□ -1.93
PRP6YBR055C YBR284WP38150 797 aa3.01□□□□□ -1.93
PRP6YBR055C PAN5P38787 379 aa3.01□□□□□ -1.93
PRP6YBR055C NIT1P40447 199 aa3.01□□□□□ -1.93
PRP6YBR055C YJR120WP47157 116 aa3.01□□□□□ -1.93
PRP6YBR055C YJR124CP47159 448 aa3.01□□□□□ -1.93
PRP6YBR055C PMT3P47190 753 aa3.01□□□□□ -1.93
PRP6YBR055C UBP15P50101 1230 aa3.01□□□□□ -1.93
PRP6YBR055C MAL11P53048 616 aa3.01□□□□□ -1.93
PRP6YBR055C LSC2P53312 427 aa3.01□□□□□ -1.93
PRP6YBR055C HBN1Q96VH4 193 aa3.01□□□□□ -1.93
PRP6YBR055C TOP3P13099 656 aa3□□□□□ -1.93
PRP6YBR055C DBP5P20449 482 aaKnown RBP3□□□□□ -1.93
PRP6YBR055C MEF1P25039 761 aa3□□□□□ -1.93
PRP6YBR055C ENP1P38333 483 aaKnown RBP3□□□□□ -1.93
PRP6YBR055C SNF7P39929 240 aaKnown RBP3□□□□□ -1.93
PRP6YBR055C LSB6P42951 607 aa3□□□□□ -1.93
PRP6YBR055C PEX8P53248 589 aa3□□□□□ -1.93
PRP6YBR055C ECM16Q04217 1267 aaKnown RBP3□□□□□ -1.93
PRP6YBR055C THI73Q07904 523 aa3□□□□□ -1.93
PRP6YBR055C TCB1Q12466 1186 aa3□□□□□ -1.93
PRP6YBR055C TFA2P36145 328 aa3□□□□□ -1.93
PRP6YBR055C ATG14P38270 344 aa3□□□□□ -1.93
PRP6YBR055C NEM1P38757 446 aa3□□□□□ -1.93
PRP6YBR055C INP51P40559 946 aaKnown RBP3□□□□□ -1.93
PRP6YBR055C FET4P40988 552 aa3□□□□□ -1.93
PRP6YBR055C CNN1P43618 361 aa3□□□□□ -1.93
PRP6YBR055C TPO2P53283 614 aa3□□□□□ -1.93
PRP6YBR055C YNL193WP53870 558 aa3□□□□□ -1.93
PRP6YBR055C HVG1P0CE11 249 aa2.99□□□□□ -1.93
PRP6YBR055C HBS1P32769 611 aaKnown RBP2.99□□□□□ -1.93
PRP6YBR055C ADD66P36040 267 aa2.99□□□□□ -1.93
PRP6YBR055C SLS1P42900 643 aa2.99□□□□□ -1.93
PRP6YBR055C NUP85P46673 744 aa2.99□□□□□ -1.93
PRP6YBR055C SDA1P53313 767 aaKnown RBP2.99□□□□□ -1.93
PRP6YBR055C YNR063WP53749 607 aa2.99□□□□□ -1.93
PRP6YBR055C UME1Q03010 460 aa2.99□□□□□ -1.93
PRP6YBR055C YDR306CQ06640 478 aa2.99□□□□□ -1.93
PRP6YBR055C FAP7Q12055 197 aaPredicted RBP2.99□□□□□ -1.93
PRP6YBR055C HTS1P07263 546 aaKnown RBP2.99□□□□□ -1.93
PRP6YBR055C KAR1P11927 433 aa2.99□□□□□ -1.93
PRP6YBR055C AMN1P38285 549 aaPredicted RBP2.99□□□□□ -1.93
PRP6YBR055C NEO1P40527 1151 aa2.99□□□□□ -1.93
PRP6YBR055C UTP5Q04177 643 aaKnown RBP2.99□□□□□ -1.93
PRP6YBR055C RAS1P01119 309 aa2.99□□□□□ -1.93
PRP6YBR055C AAR2P32357 355 aaPredicted RBP2.99□□□□□ -1.93
PRP6YBR055C CDC11P32458 415 aa2.99□□□□□ -1.93
PRP6YBR055C NAB3P38996 802 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
PRP6YBR055C DAS1P47005 663 aa2.99□□□□□ -1.93
PRP6YBR055C UTP22P53254 1237 aaPredicted RBP2.99□□□□□ -1.93
PRP6YBR055C BIO5P53744 561 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms