RNA–Protein interactions for RNA: YBR048W

RPS11B, Transcript of Protein component of the small (40S) ribosomal subunit, yeastyeast

Gene RPS11B, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPS11BYBR048W YGR161W-CQ3E744 92 aa4.96□□□□□ -1.62
RPS11BYBR048W CIT1P00890 479 aa4.95□□□□□ -1.62
RPS11BYBR048W TRP2P00899 507 aaKnown RBP4.95□□□□□ -1.62
RPS11BYBR048W IDI1P15496 288 aa4.95□□□□□ -1.62
RPS11BYBR048W TIM23P32897 222 aa4.95□□□□□ -1.62
RPS11BYBR048W AMN1P38285 549 aaPredicted RBP4.95□□□□□ -1.62
RPS11BYBR048W EXO5P38289 585 aa4.95□□□□□ -1.62
RPS11BYBR048W MCX1P38323 520 aaPredicted RBP4.95□□□□□ -1.62
RPS11BYBR048W ATG36P46983 293 aa4.95□□□□□ -1.62
RPS11BYBR048W PPT1P53043 513 aa4.95□□□□□ -1.62
RPS11BYBR048W BIO5P53744 561 aaKnown RBP4.95□□□□□ -1.62
RPS11BYBR048W SOG2Q08817 791 aa4.95□□□□□ -1.62
RPS11BYBR048W SBP1P10080 294 aaKnown RBP4.94□□□□□ -1.62
RPS11BYBR048W SSB1P11484 613 aaKnown RBP4.94□□□□□ -1.62
RPS11BYBR048W HSP60P19882 572 aaKnown RBP4.94□□□□□ -1.62
RPS11BYBR048W TSR4P25040 408 aa4.94□□□□□ -1.62
RPS11BYBR048W YKL077WP36081 392 aa4.94□□□□□ -1.62
RPS11BYBR048W VBA5P36172 582 aa4.94□□□□□ -1.62
RPS11BYBR048W MRPL16P38064 232 aa4.94□□□□□ -1.62
RPS11BYBR048W UBP12P39538 1254 aa4.94□□□□□ -1.62
RPS11BYBR048W SSB2P40150 613 aaKnown RBP4.94□□□□□ -1.62
RPS11BYBR048W INP51P40559 946 aaKnown RBP4.94□□□□□ -1.62
RPS11BYBR048W MSH4P40965 878 aaPredicted RBP4.94□□□□□ -1.62
RPS11BYBR048W YGR125WP53273 1036 aa4.94□□□□□ -1.62
RPS11BYBR048W YNR014WP53719 212 aa4.94□□□□□ -1.62
RPS11BYBR048W PEX13P80667 386 aa4.94□□□□□ -1.62
RPS11BYBR048W CAN1P04817 590 aa4.93□□□□□ -1.62
RPS11BYBR048W FPS1P23900 669 aa4.93□□□□□ -1.62
RPS11BYBR048W PIN4P34217 668 aaKnown RBP RIP-Chip data4.93□□□□□ -1.62not detected
RPS11BYBR048W ARL1P38116 183 aaKnown RBP4.93□□□□□ -1.62
RPS11BYBR048W SEA4P38164 1038 aa4.93□□□□□ -1.62
RPS11BYBR048W SNF7P39929 240 aaKnown RBP4.93□□□□□ -1.62
RPS11BYBR048W PFD1P46988 109 aa4.93□□□□□ -1.62
RPS11BYBR048W YJR142WP47173 342 aa4.93□□□□□ -1.62
RPS11BYBR048W ERP6P53198 216 aa4.93□□□□□ -1.62
RPS11BYBR048W HTS1P07263 546 aaKnown RBP4.92□□□□□ -1.62
RPS11BYBR048W MSH2P25847 964 aa4.92□□□□□ -1.62
RPS11BYBR048W THI4P32318 326 aa4.92□□□□□ -1.62
RPS11BYBR048W SLN1P39928 1220 aaPredicted RBP4.92□□□□□ -1.62
RPS11BYBR048W NOP2P40991 618 aaKnown RBP4.92□□□□□ -1.62
RPS11BYBR048W LEM3P42838 414 aa4.92□□□□□ -1.62
RPS11BYBR048W GUP1P53154 560 aa4.92□□□□□ -1.62
RPS11BYBR048W RKM2Q03942 479 aa4.92□□□□□ -1.62
RPS11BYBR048W REC8Q12188 680 aa4.92□□□□□ -1.62
RPS11BYBR048W RKM4Q12504 494 aa4.92□□□□□ -1.62
RPS11BYBR048W NOP14Q99207 810 aaKnown RBP4.92□□□□□ -1.62
RPS11BYBR048W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.91□□□□□ -1.62not detected
RPS11BYBR048W MKK2P32491 506 aa4.91□□□□□ -1.62
RPS11BYBR048W MSC7P38694 644 aa4.91□□□□□ -1.62
RPS11BYBR048W BOI2P39969 1040 aa4.91□□□□□ -1.62
RPS11BYBR048W YJR124CP47159 448 aa4.91□□□□□ -1.62
RPS11BYBR048W RTS3P53289 263 aa4.91□□□□□ -1.62
RPS11BYBR048W TAF8Q03750 510 aa4.91□□□□□ -1.62
RPS11BYBR048W EST2Q06163 884 aa4.91□□□□□ -1.62
RPS11BYBR048W EAF1Q06337 982 aa4.91□□□□□ -1.62
RPS11BYBR048W PRP9P19736 530 aaKnown RBP4.9□□□□□ -1.63
RPS11BYBR048W SYP1P25623 870 aaKnown RBP4.9□□□□□ -1.63
RPS11BYBR048W ABD1P32783 436 aaPredicted RBP4.9□□□□□ -1.63
RPS11BYBR048W TFA2P36145 328 aa4.9□□□□□ -1.63
RPS11BYBR048W HUL4P40985 892 aa4.9□□□□□ -1.63
RPS11BYBR048W YNR065CP53751 1116 aa4.9□□□□□ -1.63
RPS11BYBR048W ROD1Q02805 837 aa4.9□□□□□ -1.63
RPS11BYBR048W UGO1Q03327 502 aa4.9□□□□□ -1.63
RPS11BYBR048W TIF35Q04067 274 aaKnown RBP4.9□□□□□ -1.63
RPS11BYBR048W YLR225CQ05948 407 aaKnown RBP4.9□□□□□ -1.63
RPS11BYBR048W YIG1Q08956 461 aa4.9□□□□□ -1.63
RPS11BYBR048W YDR215CQ12240 137 aa4.9□□□□□ -1.63
RPS11BYBR048W ERR1P0CX10 437 aa4.89□□□□□ -1.63
RPS11BYBR048W ERR2P0CX11 437 aa4.89□□□□□ -1.63
RPS11BYBR048W PDC5P16467 563 aaKnown RBP4.89□□□□□ -1.63
RPS11BYBR048W DBP5P20449 482 aaKnown RBP4.89□□□□□ -1.63
RPS11BYBR048W ADD66P36040 267 aa4.89□□□□□ -1.63
RPS11BYBR048W FET4P40988 552 aa4.89□□□□□ -1.63
RPS11BYBR048W CNN1P43618 361 aa4.89□□□□□ -1.63
RPS11BYBR048W MTR4P47047 1073 aaKnown RBP4.89□□□□□ -1.63
RPS11BYBR048W UTP22P53254 1237 aaPredicted RBP4.89□□□□□ -1.63
RPS11BYBR048W DNM1P54861 757 aa4.89□□□□□ -1.63
RPS11BYBR048W TY1A-DR2Q03964 440 aaKnown RBP4.89□□□□□ -1.63
RPS11BYBR048W UTP5Q04177 643 aaKnown RBP4.89□□□□□ -1.63
RPS11BYBR048W TY1A-LR4P0C2I8 440 aaKnown RBP4.88□□□□□ -1.63
RPS11BYBR048W TY1A-DR6P0CX70 440 aa4.88□□□□□ -1.63
RPS11BYBR048W TY1A-ER1P0CX71 440 aa4.88□□□□□ -1.63
RPS11BYBR048W TY1A-LR2P0CX72 440 aa4.88□□□□□ -1.63
RPS11BYBR048W TY1A-PLP0CX73 440 aa4.88□□□□□ -1.63
RPS11BYBR048W TY1A-JR1P0CX74 440 aa4.88□□□□□ -1.63
RPS11BYBR048W TY1A-LR3P0CX75 440 aa4.88□□□□□ -1.63
RPS11BYBR048W TY1A-ML2P0CX76 440 aa4.88□□□□□ -1.63
RPS11BYBR048W INO1P11986 533 aa4.88□□□□□ -1.63
RPS11BYBR048W ARE1P25628 610 aa4.88□□□□□ -1.63
RPS11BYBR048W PAF1P38351 445 aa4.88□□□□□ -1.63
RPS11BYBR048W NEM1P38757 446 aa4.88□□□□□ -1.63
RPS11BYBR048W RTA1P53047 317 aa4.88□□□□□ -1.63
RPS11BYBR048W ESC2Q06340 456 aa4.88□□□□□ -1.63
RPS11BYBR048W TY1A-GR1Q12085 440 aa4.88□□□□□ -1.63
RPS11BYBR048W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.88□□□□□ -1.63
RPS11BYBR048W TY1A-OLQ92392 440 aaKnown RBP4.88□□□□□ -1.63
RPS11BYBR048W SRM1P21827 482 aa4.87□□□□□ -1.63
RPS11BYBR048W KNS1P32350 737 aaPredicted RBP4.87□□□□□ -1.63
RPS11BYBR048W CRP1P38845 465 aaKnown RBP4.87□□□□□ -1.63
RPS11BYBR048W PRK1P40494 810 aa4.87□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms