RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeastyeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCR1SCR1 ERP3Q12403 225 aa16.91■□□□□ 0.3
SCR1SCR1 TKL1P23254 680 aaKnown RBP16.9■□□□□ 0.3
SCR1SCR1 PRY3P47033 881 aa16.9■□□□□ 0.3
SCR1SCR1 YKE2P52553 114 aa16.9■□□□□ 0.3
SCR1SCR1 ARP5P53946 755 aa16.9■□□□□ 0.3
SCR1SCR1 MDM20Q12387 796 aaKnown RBP16.9■□□□□ 0.3
SCR1SCR1 RKM4Q12504 494 aa16.9■□□□□ 0.3
SCR1SCR1 TFC4P33339 1025 aa16.89■□□□□ 0.29
SCR1SCR1 VID28P40547 921 aa16.89■□□□□ 0.29
SCR1SCR1 TRL1P09880 827 aaKnown RBP16.88■□□□□ 0.29
SCR1SCR1 AKR1P39010 764 aa16.88■□□□□ 0.29
SCR1SCR1 ECM30Q06673 1274 aa16.88■□□□□ 0.29
SCR1SCR1 MATALPHA2P0CY08 210 aa16.87■□□□□ 0.29
SCR1SCR1 HMLALPHA2P0CY09 210 aa16.87■□□□□ 0.29
SCR1SCR1 BMH2P34730 273 aaKnown RBP16.87■□□□□ 0.29
SCR1SCR1 UIP5P36137 443 aa16.87■□□□□ 0.29
SCR1SCR1 KSP1P38691 1029 aaKnown RBP16.87■□□□□ 0.29
SCR1SCR1 CCT3P39077 534 aaKnown RBP16.87■□□□□ 0.29
SCR1SCR1 UBP10P53874 792 aaPredicted RBP16.87■□□□□ 0.29
SCR1SCR1 ECM29P38737 1868 aa16.86■□□□□ 0.29
SCR1SCR1 REG2P38232 338 aa16.86■□□□□ 0.29
SCR1SCR1 YFL040WP43562 540 aa16.86■□□□□ 0.29
SCR1SCR1 FMP30Q02883 468 aa16.86■□□□□ 0.29
SCR1SCR1 MAM3Q12296 706 aa16.86■□□□□ 0.29
SCR1SCR1 MYO1P08964 1928 aa16.86■□□□□ 0.29
SCR1SCR1 SES1P07284 462 aaKnown RBP16.85■□□□□ 0.29
SCR1SCR1 RNR2P09938 399 aaKnown RBP16.85■□□□□ 0.29
SCR1SCR1 RPC31P17890 251 aa16.85■□□□□ 0.29
SCR1SCR1 DBP1P24784 617 aaKnown RBP16.85■□□□□ 0.29
SCR1SCR1 UGA4P32837 571 aa16.85■□□□□ 0.29
SCR1SCR1 GDE1Q02979 1223 aa16.85■□□□□ 0.29
SCR1SCR1 TRM11Q12463 433 aa16.85■□□□□ 0.29
SCR1SCR1 PHR1P05066 565 aaKnown RBP RIP-Chip data16.84■□□□□ 0.29not detected
SCR1SCR1 YUR1P26725 428 aa16.84■□□□□ 0.29
SCR1SCR1 GPT2P36148 743 aa16.84■□□□□ 0.29
SCR1SCR1 NDT80P38830 627 aa16.84■□□□□ 0.29
SCR1SCR1 ASE1P50275 885 aa16.84■□□□□ 0.29
SCR1SCR1 PTA1Q01329 785 aaPredicted RBP16.84■□□□□ 0.29
SCR1SCR1 MET6P05694 767 aaKnown RBP16.83■□□□□ 0.28
SCR1SCR1 PDC1P06169 563 aaKnown RBP16.83■□□□□ 0.28
SCR1SCR1 BCS1P32839 456 aa16.83■□□□□ 0.28
SCR1SCR1 DBP7P36120 742 aaKnown RBP16.83■□□□□ 0.28
SCR1SCR1 RXT2P38255 430 aa16.83■□□□□ 0.28
SCR1SCR1 PAN5P38787 379 aa16.83■□□□□ 0.28
SCR1SCR1 NOC2P39744 710 aaKnown RBP16.83■□□□□ 0.28
SCR1SCR1 AFG3P39925 761 aa16.83■□□□□ 0.28
SCR1SCR1 VPS13Q07878 3144 aa16.83■□□□□ 0.28
SCR1SCR1 POX1P13711 748 aa16.82■□□□□ 0.28
SCR1SCR1 YPL034WQ03083 165 aa16.82■□□□□ 0.28
SCR1SCR1 SAS3P34218 831 aa16.81■□□□□ 0.28
SCR1SCR1 WHI3P34761 661 aaKnown RBP16.81■□□□□ 0.28
SCR1SCR1 MAK11P20484 414 aaKnown RBP16.8■□□□□ 0.28
SCR1SCR1 SKP2P42843 763 aa16.8■□□□□ 0.28
SCR1SCR1 HUL5P53119 910 aa16.8■□□□□ 0.28
SCR1SCR1 YGL039WP53183 348 aaKnown RBP16.8■□□□□ 0.28
SCR1SCR1 YMR321CQ04898 105 aa16.8■□□□□ 0.28
SCR1SCR1 STI1P15705 589 aaKnown RBP RIP-Chip data16.79■□□□□ 0.28not detected
SCR1SCR1 SWI4P25302 1093 aaKnown RBP16.79■□□□□ 0.28
SCR1SCR1 SUL1P38359 859 aa16.79■□□□□ 0.28
SCR1SCR1 FIR1P40020 876 aa16.79■□□□□ 0.28
SCR1SCR1 PCI8P40512 444 aa16.79■□□□□ 0.28
SCR1SCR1 EPL1P43572 832 aa16.79■□□□□ 0.28
SCR1SCR1 YLR326WQ06170 240 aaKnown RBP16.79■□□□□ 0.28
SCR1SCR1 TAO3P40468 2376 aa16.79■□□□□ 0.28
SCR1SCR1 HCA4P20448 770 aaKnown RBP16.78■□□□□ 0.28
SCR1SCR1 SRO9P25567 434 aaKnown RBP16.78■□□□□ 0.28
SCR1SCR1 YHL017WP38745 532 aa16.78■□□□□ 0.28
SCR1SCR1 BNI5P53890 448 aaKnown RBP16.78■□□□□ 0.28
SCR1SCR1 PSK2Q08217 1101 aa16.78■□□□□ 0.28
SCR1SCR1 CEX1Q12453 761 aa16.78■□□□□ 0.28
SCR1SCR1 CBP3P21560 335 aa16.77■□□□□ 0.28
SCR1SCR1 CLA4P48562 842 aa16.77■□□□□ 0.28
SCR1SCR1 ASF1P32447 279 aa16.76■□□□□ 0.27
SCR1SCR1 YGL138CP53122 345 aa16.76■□□□□ 0.27
SCR1SCR1 OYE2Q03558 400 aaKnown RBP16.76■□□□□ 0.27
SCR1SCR1 OXR1Q08952 273 aa16.76■□□□□ 0.27
SCR1SCR1 ARP6Q12509 438 aa16.76■□□□□ 0.27
SCR1SCR1 RTP1Q12751 981 aa16.76■□□□□ 0.27
SCR1SCR1 HEM1P09950 548 aaPredicted RBP16.75■□□□□ 0.27
SCR1SCR1 SNA3P14359 133 aa16.75■□□□□ 0.27
SCR1SCR1 RPN10P38886 268 aaKnown RBP16.75■□□□□ 0.27
SCR1SCR1 HMF1P40037 129 aaKnown RBP16.75■□□□□ 0.27
SCR1SCR1 BUD6P41697 788 aa16.75■□□□□ 0.27
SCR1SCR1 UBP15P50101 1230 aa16.75■□□□□ 0.27
SCR1SCR1 NAF1P53919 492 aaKnown RBP16.75■□□□□ 0.27
SCR1SCR1 DAK1P54838 584 aaKnown RBP16.75■□□□□ 0.27
SCR1SCR1 CSM3Q04659 317 aa16.75■□□□□ 0.27
SCR1SCR1 YLR407WQ06070 228 aa16.75■□□□□ 0.27
SCR1SCR1 TSR3Q12094 313 aaKnown RBP16.75■□□□□ 0.27
SCR1SCR1 YDR461C-AQ2V2P7 80 aa16.75■□□□□ 0.27
SCR1SCR1 CLB5P30283 435 aa16.74■□□□□ 0.27
SCR1SCR1 SMD2Q06217 110 aaKnown RBP16.74■□□□□ 0.27
SCR1SCR1 SCS3P53012 380 aa16.73■□□□□ 0.27
SCR1SCR1 AVT3P36062 692 aa16.72■□□□□ 0.27
SCR1SCR1 RET3P53600 189 aa16.72■□□□□ 0.27
SCR1SCR1 YML020WQ03722 664 aa16.72■□□□□ 0.27
SCR1SCR1 GIS4Q04233 774 aa16.72■□□□□ 0.27
SCR1SCR1 YLL058WQ12198 575 aa16.72■□□□□ 0.27
SCR1SCR1 ISW1P38144 1129 aa16.71■□□□□ 0.27
SCR1SCR1 EAR1Q03212 550 aa16.71■□□□□ 0.27
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms