RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 TXNDC2Q86VQ3 553 aa15.33■□□□□ 0.04
LITAF-221ENST00000622633 ATP7BP35670 1465 aa15.32■□□□□ 0.04
LITAF-221ENST00000622633 CDC42BPGQ6DT37 1551 aa15.32■□□□□ 0.04
LITAF-221ENST00000622633 RRS1Q15050 365 aaKnown RBP15.32■□□□□ 0.04
LITAF-221ENST00000622633 IFT57Q9NWB7 429 aa15.32■□□□□ 0.04
LITAF-221ENST00000622633 A2ML1A8K2U0 1454 aa15.32■□□□□ 0.04
LITAF-221ENST00000622633 CHMP5Q9NZZ3 219 aa15.32■□□□□ 0.04
LITAF-221ENST00000622633 PPIP5K1Q6PFW1 1433 aa15.31■□□□□ 0.04
LITAF-221ENST00000622633 ZNF853P0CG23 659 aa15.31■□□□□ 0.04
LITAF-221ENST00000622633 CCDC173Q0VFZ6 552 aa15.31■□□□□ 0.04
LITAF-221ENST00000622633 HSCBQ8IWL3 235 aa15.31■□□□□ 0.04
LITAF-221ENST00000622633 C8orf58Q8NAV2 365 aa15.31■□□□□ 0.04
LITAF-221ENST00000622633 ARHGAP45Q92619 1136 aa15.31■□□□□ 0.04
LITAF-221ENST00000622633 NUDT16Q96DE0 195 aaKnown RBP15.31■□□□□ 0.04
LITAF-221ENST00000622633 FAM83GA6ND36 823 aa15.3■□□□□ 0.04
LITAF-221ENST00000622633 SIRT2Q8IXJ6 389 aa15.3■□□□□ 0.04
LITAF-221ENST00000622633 ZNF500O60304 480 aaPredicted RBP15.29■□□□□ 0.04
LITAF-221ENST00000622633 DCTN1Q14203 1278 aa15.29■□□□□ 0.04
LITAF-221ENST00000622633 ATP2B3Q16720 1220 aa15.29■□□□□ 0.04
LITAF-221ENST00000622633 TWISTNBQ3B726 338 aaPredicted RBP15.29■□□□□ 0.04
LITAF-221ENST00000622633 DLC1Q96QB1 1528 aa15.29■□□□□ 0.04
LITAF-221ENST00000622633 CPSF1Q10570 1443 aaKnown RBP15.29■□□□□ 0.04
LITAF-221ENST00000622633 RBM25P49756 843 aaKnown RBP15.29■□□□□ 0.04
LITAF-221ENST00000622633 PSEN1P49768 467 aa15.29■□□□□ 0.04
LITAF-221ENST00000622633 CNKSR2Q8WXI2 1034 aa15.29■□□□□ 0.04
LITAF-221ENST00000622633 COG3Q96JB2 828 aa15.29■□□□□ 0.04
LITAF-221ENST00000622633 EDC4Q6P2E9 1401 aaKnown RBP15.29■□□□□ 0.04
LITAF-221ENST00000622633 METP08581 1390 aa15.29■□□□□ 0.04
LITAF-221ENST00000622633 MAP2P11137 1827 aaKnown RBP15.29■□□□□ 0.04
LITAF-221ENST00000622633 BMP2KLQ5H9B9 411 aa15.28■□□□□ 0.04
LITAF-221ENST00000622633 GCC1Q96CN9 775 aa15.28■□□□□ 0.04
LITAF-221ENST00000622633 DNAJC2Q99543 621 aaKnown RBP15.28■□□□□ 0.04
LITAF-221ENST00000622633 HDAC5Q9UQL6 1122 aa15.28■□□□□ 0.04
LITAF-221ENST00000622633 CFAP44Q96MT7 982 aa15.28■□□□□ 0.04
LITAF-221ENST00000622633 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
LITAF-221ENST00000622633 XPCQ01831 940 aaPredicted RBP15.27■□□□□ 0.04
LITAF-221ENST00000622633 PIK3R4Q99570 1358 aa15.27■□□□□ 0.04
LITAF-221ENST00000622633 PTCH1Q13635 1447 aa15.27■□□□□ 0.04
LITAF-221ENST00000622633 SOX12O15370 315 aa15.27■□□□□ 0.03
LITAF-221ENST00000622633 AEBP1Q8IUX7 1158 aa15.27■□□□□ 0.03
LITAF-221ENST00000622633 CCDC61Q9Y6R9 512 aa15.27■□□□□ 0.03
LITAF-221ENST00000622633 ABCC4O15439 1325 aa15.27■□□□□ 0.03
LITAF-221ENST00000622633 SASS6Q6UVJ0 657 aa15.26■□□□□ 0.03
LITAF-221ENST00000622633 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
LITAF-221ENST00000622633 TULP1O00294 542 aaPredicted RBP15.26■□□□□ 0.03
LITAF-221ENST00000622633 KCNJ4P48050 445 aa15.25■□□□□ 0.03
LITAF-221ENST00000622633 LMOD3Q0VAK6 560 aa15.25■□□□□ 0.03
LITAF-221ENST00000622633 AATKQ6ZMQ8 1374 aa15.25■□□□□ 0.03
LITAF-221ENST00000622633 IGSF3O75054 1194 aa15.25■□□□□ 0.03
LITAF-221ENST00000622633 MYCNP04198 464 aaPredicted RBP15.25■□□□□ 0.03
LITAF-221ENST00000622633 ZNF710Q8N1W2 664 aa15.25■□□□□ 0.03
LITAF-221ENST00000622633 SNX21Q969T3 373 aa15.25■□□□□ 0.03
LITAF-221ENST00000622633 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.25■□□□□ 0.03
LITAF-221ENST00000622633 CDK12Q9NYV4 1490 aaPredicted RBP15.25■□□□□ 0.03
LITAF-221ENST00000622633 TBC1D9Q6ZT07 1266 aa15.24■□□□□ 0.03
LITAF-221ENST00000622633 API5Q9BZZ5 524 aaKnown RBP15.24■□□□□ 0.03
LITAF-221ENST00000622633 CPS1P31327 1500 aa15.24■□□□□ 0.03
LITAF-221ENST00000622633 CLGNO14967 610 aa15.24■□□□□ 0.03
LITAF-221ENST00000622633 KIF2CQ99661 725 aa15.24■□□□□ 0.03
LITAF-221ENST00000622633 RIMBP3CA6NJZ7 1639 aa15.23■□□□□ 0.03
LITAF-221ENST00000622633 RIMBP3BA6NNM3 1639 aa15.23■□□□□ 0.03
LITAF-221ENST00000622633 RIMBP3Q9UFD9 1639 aa15.23■□□□□ 0.03
LITAF-221ENST00000622633 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.23■□□□□ 0.03
LITAF-221ENST00000622633 NOL7Q9UMY1 257 aaKnown RBP15.23■□□□□ 0.03
LITAF-221ENST00000622633 HSP90AB1P08238 724 aaKnown RBP15.22■□□□□ 0.03
LITAF-221ENST00000622633 DDIT3P35638 169 aa15.22■□□□□ 0.03
LITAF-221ENST00000622633 KRT24Q2M2I5 525 aa15.22■□□□□ 0.03
LITAF-221ENST00000622633 CHMP4CQ96CF2 233 aa15.22■□□□□ 0.03
LITAF-221ENST00000622633 SETD1AO15047 1707 aaKnown RBP15.22■□□□□ 0.03
LITAF-221ENST00000622633 PRR36Q9H6K5 1346 aa15.22■□□□□ 0.03
LITAF-221ENST00000622633 SPATA31D1Q6ZQQ2 1576 aa15.22■□□□□ 0.03
LITAF-221ENST00000622633 SULT6B1Q6IMI4 303 aa15.21■□□□□ 0.03
LITAF-221ENST00000622633 AGLP35573 1532 aa15.21■□□□□ 0.03
LITAF-221ENST00000622633 CD2BP2O95400 341 aaKnown RBP15.21■□□□□ 0.02
LITAF-221ENST00000622633 EIF4A2Q14240 407 aaKnown RBP15.21■□□□□ 0.02
LITAF-221ENST00000622633 HS1BP3Q53T59 392 aa15.21■□□□□ 0.02
LITAF-221ENST00000622633 RBM42Q9BTD8 480 aaKnown RBP15.21■□□□□ 0.02
LITAF-221ENST00000622633 FOXD4L1Q9NU39 408 aa15.21■□□□□ 0.02
LITAF-221ENST00000622633 CSPP1Q1MSJ5 1256 aa15.2■□□□□ 0.02
LITAF-221ENST00000622633 JARID2Q92833 1246 aaPredicted RBP15.2■□□□□ 0.02
LITAF-221ENST00000622633 ZBTB9Q96C00 473 aa15.2■□□□□ 0.02
LITAF-221ENST00000622633 NCOA3Q9Y6Q9 1424 aa15.2■□□□□ 0.02
LITAF-221ENST00000622633 NUTM2FA1L443 756 aa15.2■□□□□ 0.02
LITAF-221ENST00000622633 TSPOAP1O95153 1857 aa15.19■□□□□ 0.02
LITAF-221ENST00000622633 C16orf71Q8IYS4 520 aaPredicted RBP15.19■□□□□ 0.02
LITAF-221ENST00000622633 ESF1Q9H501 851 aaKnown RBP15.19■□□□□ 0.02
LITAF-221ENST00000622633 DDX11L8A8MPP1 907 aa15.19■□□□□ 0.02
LITAF-221ENST00000622633 NASPP49321 788 aaPredicted RBP15.19■□□□□ 0.02
LITAF-221ENST00000622633 MCM10Q7L590 875 aa15.19■□□□□ 0.02
LITAF-221ENST00000622633 TNPO1Q92973 898 aaKnown RBP15.19■□□□□ 0.02
LITAF-221ENST00000622633 NRXN3Q9Y4C0 1643 aa15.19■□□□□ 0.02
LITAF-221ENST00000622633 GSPT1P15170 499 aaKnown RBP15.18■□□□□ 0.02
LITAF-221ENST00000622633 PLEKHM2Q8IWE5 1019 aa15.18■□□□□ 0.02
LITAF-221ENST00000622633 SIRT1Q96EB6 747 aa15.18■□□□□ 0.02
LITAF-221ENST00000622633 DCTPP1Q9H773 170 aa15.18■□□□□ 0.02
LITAF-221ENST00000622633 CDC45O75419 566 aa15.18■□□□□ 0.02
LITAF-221ENST00000622633 ZNF771Q7L3S4 317 aaPredicted RBP15.18■□□□□ 0.02
LITAF-221ENST00000622633 INTS3Q68E01 1043 aaKnown RBP15.17■□□□□ 0.02
LITAF-221ENST00000622633 REREQ9P2R6 1566 aa15.17■□□□□ 0.02
LITAF-221ENST00000622633 SPDYE4A6NLX3 237 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms