RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 MRPL50Q8N5N7 158 aaKnown RBP20.74■□□□□ 0.91
CNOT3-208ENST00000613073 SETD1BQ9UPS6 1966 aaKnown RBP20.74■□□□□ 0.91
CNOT3-208ENST00000613073 KRT24Q2M2I5 525 aa20.74■□□□□ 0.91
CNOT3-208ENST00000613073 SPRYD3Q8NCJ5 442 aa20.74■□□□□ 0.91
CNOT3-208ENST00000613073 LTV1Q96GA3 475 aaPredicted RBP20.74■□□□□ 0.91
CNOT3-208ENST00000613073 EYA1Q99502 592 aa20.74■□□□□ 0.91
CNOT3-208ENST00000613073 PDZRN3Q9UPQ7 1066 aa20.74■□□□□ 0.91
CNOT3-208ENST00000613073 PLEKHG5O94827 1062 aa20.74■□□□□ 0.91
CNOT3-208ENST00000613073 ZNF428Q96B54 188 aa20.73■□□□□ 0.91
CNOT3-208ENST00000613073 XRCC6P12956 609 aaKnown RBP eCLIP20.73■□□□□ 0.91
CNOT3-208ENST00000613073 ZNF142P52746 1687 aaPredicted RBP20.72■□□□□ 0.91
CNOT3-208ENST00000613073 MTHFSDQ2M296 383 aaKnown RBP20.72■□□□□ 0.91
CNOT3-208ENST00000613073 MIS18AQ9NYP9 233 aa20.71■□□□□ 0.91
CNOT3-208ENST00000613073 USP19O94966 1318 aa20.7■□□□□ 0.91
CNOT3-208ENST00000613073 ZBTB40Q9NUA8 1239 aa20.7■□□□□ 0.9
CNOT3-208ENST00000613073 RGPD1P0DJD0 1748 aa20.7■□□□□ 0.9
CNOT3-208ENST00000613073 HOXC9P31274 260 aa20.7■□□□□ 0.9
CNOT3-208ENST00000613073 ARHGEF10O15013 1369 aa20.7■□□□□ 0.9
CNOT3-208ENST00000613073 PSME1Q06323 249 aa20.69■□□□□ 0.9
CNOT3-208ENST00000613073 NPHP4O75161 1426 aaPredicted RBP20.69■□□□□ 0.9
CNOT3-208ENST00000613073 ZBTB7CA1YPR0 619 aa20.68■□□□□ 0.9
CNOT3-208ENST00000613073 BRPF1P55201 1214 aaPredicted RBP20.68■□□□□ 0.9
CNOT3-208ENST00000613073 XPCQ01831 940 aaPredicted RBP20.68■□□□□ 0.9
CNOT3-208ENST00000613073 GOLGA6L3A6NEY3 463 aa20.68■□□□□ 0.9
CNOT3-208ENST00000613073 CHL1O00533 1208 aa20.67■□□□□ 0.9
CNOT3-208ENST00000613073 IGSF1Q8N6C5 1336 aa20.67■□□□□ 0.9
CNOT3-208ENST00000613073 BECN1Q14457 450 aa20.67■□□□□ 0.9
CNOT3-208ENST00000613073 RTF1Q92541 710 aaKnown RBP20.67■□□□□ 0.9
CNOT3-208ENST00000613073 ORAI2Q96SN7 254 aa20.67■□□□□ 0.9
CNOT3-208ENST00000613073 C1orf115Q9H7X2 142 aa20.66■□□□□ 0.9
CNOT3-208ENST00000613073 ADGRL3Q9HAR2 1447 aa20.65■□□□□ 0.9
CNOT3-208ENST00000613073 USHBP1Q8N6Y0 703 aa20.65■□□□□ 0.9
CNOT3-208ENST00000613073 HDAC1Q13547 482 aaPredicted RBP20.65■□□□□ 0.9
CNOT3-208ENST00000613073 ARHGAP45Q92619 1136 aa20.64■□□□□ 0.9
CNOT3-208ENST00000613073 KDRP35968 1356 aa20.64■□□□□ 0.89
CNOT3-208ENST00000613073 MARF1Q9Y4F3 1742 aaKnown RBP20.64■□□□□ 0.89
CNOT3-208ENST00000613073 RRP9O43818 475 aaKnown RBP20.63■□□□□ 0.89
CNOT3-208ENST00000613073 CLCN1P35523 988 aa20.63■□□□□ 0.89
CNOT3-208ENST00000613073 ZBTB7BO15156 539 aaPredicted RBP20.63■□□□□ 0.89
CNOT3-208ENST00000613073 LMOD2Q6P5Q4 547 aa20.63■□□□□ 0.89
CNOT3-208ENST00000613073 CRB1P82279 1406 aa20.62■□□□□ 0.89
CNOT3-208ENST00000613073 DNAJC5Q9H3Z4 198 aa20.62■□□□□ 0.89
CNOT3-208ENST00000613073 PROSER2Q86WR7 435 aaPredicted RBP20.61■□□□□ 0.89
CNOT3-208ENST00000613073 GAS2L2Q8NHY3 880 aa20.61■□□□□ 0.89
CNOT3-208ENST00000613073 TSPYL4Q9UJ04 414 aa20.61■□□□□ 0.89
CNOT3-208ENST00000613073 ABCC4O15439 1325 aa20.6■□□□□ 0.89
CNOT3-208ENST00000613073 API5Q9BZZ5 524 aaKnown RBP20.59■□□□□ 0.89
CNOT3-208ENST00000613073 ANTXR1Q9H6X2 564 aa20.58■□□□□ 0.89
CNOT3-208ENST00000613073 SMC5Q8IY18 1101 aa20.58■□□□□ 0.88
CNOT3-208ENST00000613073 GNAT3A8MTJ3 354 aa20.57■□□□□ 0.88
CNOT3-208ENST00000613073 KIF24Q5T7B8 1368 aa20.57■□□□□ 0.88
CNOT3-208ENST00000613073 IP6K1Q92551 441 aa20.56■□□□□ 0.88
CNOT3-208ENST00000613073 SLC4A2P04920 1241 aa20.56■□□□□ 0.88
CNOT3-208ENST00000613073 KIAA0232Q92628 1395 aa20.55■□□□□ 0.88
CNOT3-208ENST00000613073 TBC1D2Q9BYX2 928 aa20.55■□□□□ 0.88
CNOT3-208ENST00000613073 LNPKQ9C0E8 428 aa20.55■□□□□ 0.88
CNOT3-208ENST00000613073 LTN1O94822 1766 aa20.55■□□□□ 0.88
CNOT3-208ENST00000613073 NBPF6Q5VWK0 638 aa20.55■□□□□ 0.88
CNOT3-208ENST00000613073 NBPF4Q96M43 638 aa20.55■□□□□ 0.88
CNOT3-208ENST00000613073 NWD1Q149M9 1564 aa20.55■□□□□ 0.88
CNOT3-208ENST00000613073 HAP1P54257 671 aaPredicted RBP20.54■□□□□ 0.88
CNOT3-208ENST00000613073 FSD2A1L4K1 749 aa20.54■□□□□ 0.88
CNOT3-208ENST00000613073 IL17REQ8NFR9 667 aa20.53■□□□□ 0.88
CNOT3-208ENST00000613073 LRRC59Q96AG4 307 aaKnown RBP20.53■□□□□ 0.88
CNOT3-208ENST00000613073 CHMP4BQ9H444 224 aaKnown RBP20.53■□□□□ 0.88
CNOT3-208ENST00000613073 MCM4P33991 863 aa20.53■□□□□ 0.88
CNOT3-208ENST00000613073 SIRT2Q8IXJ6 389 aa20.53■□□□□ 0.88
CNOT3-208ENST00000613073 ERBB4Q15303 1308 aa20.53■□□□□ 0.88
CNOT3-208ENST00000613073 KCNH5Q8NCM2 988 aa20.52■□□□□ 0.88
CNOT3-208ENST00000613073 NECTIN2Q92692 538 aa20.52■□□□□ 0.88
CNOT3-208ENST00000613073 USP54Q70EL1 1684 aa20.52■□□□□ 0.88
CNOT3-208ENST00000613073 VIRMAQ69YN4 1812 aaKnown RBP20.52■□□□□ 0.88
CNOT3-208ENST00000613073 GCP02774 474 aa20.52■□□□□ 0.88
CNOT3-208ENST00000613073 NUCB1Q02818 461 aa20.51■□□□□ 0.87
CNOT3-208ENST00000613073 ANKRD45Q5TZF3 282 aa20.51■□□□□ 0.87
CNOT3-208ENST00000613073 RTL1A6NKG5 1358 aa20.51■□□□□ 0.87
CNOT3-208ENST00000613073 NFAT5O94916 1531 aa20.51■□□□□ 0.87
CNOT3-208ENST00000613073 G2E3Q7L622 706 aa20.51■□□□□ 0.87
CNOT3-208ENST00000613073 MAP3K5Q99683 1374 aa20.5■□□□□ 0.87
CNOT3-208ENST00000613073 TRAK2O60296 914 aa20.5■□□□□ 0.87
CNOT3-208ENST00000613073 KRT28Q7Z3Y7 464 aa20.5■□□□□ 0.87
CNOT3-208ENST00000613073 CHD1LQ86WJ1 897 aa20.5■□□□□ 0.87
CNOT3-208ENST00000613073 PODXL2Q9NZ53 605 aa20.5■□□□□ 0.87
CNOT3-208ENST00000613073 ESPNB1AK53 854 aa20.49■□□□□ 0.87
CNOT3-208ENST00000613073 HTATSF1O43719 755 aaKnown RBP20.49■□□□□ 0.87
CNOT3-208ENST00000613073 DDX17Q92841 729 aaKnown RBP20.49■□□□□ 0.87
CNOT3-208ENST00000613073 C19orf44Q9H6X5 657 aa20.49■□□□□ 0.87
CNOT3-208ENST00000613073 UPF2Q9HAU5 1272 aaKnown RBP20.49■□□□□ 0.87
CNOT3-208ENST00000613073 INTS3Q68E01 1043 aaKnown RBP20.49■□□□□ 0.87
CNOT3-208ENST00000613073 RGS12O14924 1447 aa20.48■□□□□ 0.87
CNOT3-208ENST00000613073 MSH6P52701 1360 aa20.48■□□□□ 0.87
CNOT3-208ENST00000613073 F6X3S4 739 aa20.48■□□□□ 0.87
CNOT3-208ENST00000613073 SLC4A10Q6U841 1118 aa20.48■□□□□ 0.87
CNOT3-208ENST00000613073 HSPA2P54652 639 aa20.47■□□□□ 0.87
CNOT3-208ENST00000613073 PTPRCP08575 1304 aa20.47■□□□□ 0.87
CNOT3-208ENST00000613073 TAF7Q15545 349 aaPredicted RBP20.46■□□□□ 0.87
CNOT3-208ENST00000613073 ARHGEF25Q86VW2 580 aa20.46■□□□□ 0.87
CNOT3-208ENST00000613073 GCC1Q96CN9 775 aa20.46■□□□□ 0.87
CNOT3-208ENST00000613073 C1orf167Q5SNV9 1468 aa20.45■□□□□ 0.86
CNOT3-208ENST00000613073 MRE11P49959 708 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 258 ms