RNA–Protein interactions for RNA: ENST00000589228.5

PRKAR1A-217, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-217ENST00000589228 NUP160Q12769 1436 aa14.46□□□□□ -0.09
PRKAR1A-217ENST00000589228 NUCB1Q02818 461 aa14.46□□□□□ -0.1
PRKAR1A-217ENST00000589228 FLIIQ13045 1269 aa14.46□□□□□ -0.1
PRKAR1A-217ENST00000589228 TRIM29Q14134 588 aa14.46□□□□□ -0.1
PRKAR1A-217ENST00000589228 MPRIPQ6WCQ1 1025 aa14.46□□□□□ -0.1
PRKAR1A-217ENST00000589228 ATP2B1P20020 1258 aa14.45□□□□□ -0.1
PRKAR1A-217ENST00000589228 CCDC85AQ96PX6 553 aaPredicted RBP14.45□□□□□ -0.1
PRKAR1A-217ENST00000589228 ANKRD36BQ8N2N9 1353 aa14.45□□□□□ -0.1
PRKAR1A-217ENST00000589228 UHRF1BP1Q6BDS2 1440 aa14.45□□□□□ -0.1
PRKAR1A-217ENST00000589228 DNMT1P26358 1616 aaKnown RBP14.45□□□□□ -0.1
PRKAR1A-217ENST00000589228 DUOX2Q9NRD8 1548 aa14.45□□□□□ -0.1
PRKAR1A-217ENST00000589228 FOXO3O43524 673 aa14.45□□□□□ -0.1
PRKAR1A-217ENST00000589228 STRN4Q9NRL3 753 aa14.45□□□□□ -0.1
PRKAR1A-217ENST00000589228 COL17A1Q9UMD9 1497 aaPredicted RBP14.44□□□□□ -0.1
PRKAR1A-217ENST00000589228 CASTP20810 708 aaKnown RBP14.44□□□□□ -0.1
PRKAR1A-217ENST00000589228 PDCP20941 246 aa14.44□□□□□ -0.1
PRKAR1A-217ENST00000589228 ERC1Q8IUD2 1116 aa14.44□□□□□ -0.1
PRKAR1A-217ENST00000589228 PANK2Q9BZ23 570 aa14.44□□□□□ -0.1
PRKAR1A-217ENST00000589228 ACEP12821 1306 aa14.44□□□□□ -0.1
PRKAR1A-217ENST00000589228 TATP17735 454 aaPredicted RBP14.44□□□□□ -0.1
PRKAR1A-217ENST00000589228 NSD2O96028 1365 aa14.44□□□□□ -0.1
PRKAR1A-217ENST00000589228 KDM6BO15054 1643 aa14.44□□□□□ -0.1
PRKAR1A-217ENST00000589228 ITSN2Q9NZM3 1697 aa14.43□□□□□ -0.1
PRKAR1A-217ENST00000589228 ARHGEF12Q9NZN5 1544 aa14.43□□□□□ -0.1
PRKAR1A-217ENST00000589228 BLOC1S2Q6QNY1 142 aa14.43□□□□□ -0.1
PRKAR1A-217ENST00000589228 HOMER1Q86YM7 354 aa14.43□□□□□ -0.1
PRKAR1A-217ENST00000589228 CHMP4CQ96CF2 233 aa14.43□□□□□ -0.1
PRKAR1A-217ENST00000589228 IL16Q14005 1332 aa14.43□□□□□ -0.1
PRKAR1A-217ENST00000589228 TPD52L1Q16890 204 aaPredicted RBP14.43□□□□□ -0.1
PRKAR1A-217ENST00000589228 CCDC83Q8IWF9 413 aa14.43□□□□□ -0.1
PRKAR1A-217ENST00000589228 BOLA2Q9H3K6 86 aa14.43□□□□□ -0.1
PRKAR1A-217ENST00000589228 KIF1BPQ96EK5 621 aa14.43□□□□□ -0.1
PRKAR1A-217ENST00000589228 PDRG1Q9NUG6 133 aa14.43□□□□□ -0.1
PRKAR1A-217ENST00000589228 SPG7Q9UQ90 795 aa14.43□□□□□ -0.1
PRKAR1A-217ENST00000589228 PIK3C2GO75747 1445 aa14.42□□□□□ -0.1
PRKAR1A-217ENST00000589228 VAMP4O75379 141 aa14.42□□□□□ -0.1
PRKAR1A-217ENST00000589228 PRPF40BQ6NWY9 871 aaKnown RBP14.42□□□□□ -0.1
PRKAR1A-217ENST00000589228 SDSP20132 328 aa14.42□□□□□ -0.1
PRKAR1A-217ENST00000589228 STK11IPQ8N1F8 1099 aa14.42□□□□□ -0.1
PRKAR1A-217ENST00000589228 CCDC8Q9H0W5 538 aaPredicted RBP14.42□□□□□ -0.1
PRKAR1A-217ENST00000589228 DDX11Q96FC9 970 aa14.41□□□□□ -0.1
PRKAR1A-217ENST00000589228 ZBTB40Q9NUA8 1239 aa14.41□□□□□ -0.1
PRKAR1A-217ENST00000589228 KDM2BQ8NHM5 1336 aa14.41□□□□□ -0.1
PRKAR1A-217ENST00000589228 MRPL50Q8N5N7 158 aaKnown RBP14.41□□□□□ -0.1
PRKAR1A-217ENST00000589228 BAG4O95429 457 aaKnown RBP14.41□□□□□ -0.1
PRKAR1A-217ENST00000589228 CABP4P57796 275 aa14.41□□□□□ -0.1
PRKAR1A-217ENST00000589228 TTC22Q5TAA0 569 aa14.41□□□□□ -0.1
PRKAR1A-217ENST00000589228 VPS37DQ86XT2 251 aa14.41□□□□□ -0.1
PRKAR1A-217ENST00000589228 HIP1O00291 1037 aa14.4□□□□□ -0.1
PRKAR1A-217ENST00000589228 DENND4BO75064 1496 aaPredicted RBP14.4□□□□□ -0.1
PRKAR1A-217ENST00000589228 KINO60870 393 aaKnown RBP14.4□□□□□ -0.1
PRKAR1A-217ENST00000589228 KRT85P78386 507 aa14.4□□□□□ -0.1
PRKAR1A-217ENST00000589228 FKBP4Q02790 459 aaKnown RBP eCLIP14.4□□□□□ -0.1
PRKAR1A-217ENST00000589228 RBM27Q9P2N5 1060 aaKnown RBP14.4□□□□□ -0.1
PRKAR1A-217ENST00000589228 PI4KAP2A4QPH2 592 aa14.39□□□□□ -0.11
PRKAR1A-217ENST00000589228 PTCD1O75127 700 aaKnown RBP14.39□□□□□ -0.11
PRKAR1A-217ENST00000589228 CLSTN1O94985 981 aa14.39□□□□□ -0.11
PRKAR1A-217ENST00000589228 PI4KAP1Q8N8J0 262 aa14.39□□□□□ -0.11
PRKAR1A-217ENST00000589228 ASXL2Q76L83 1435 aa14.39□□□□□ -0.11
PRKAR1A-217ENST00000589228 XRCC6P12956 609 aaKnown RBP eCLIP14.39□□□□□ -0.11
PRKAR1A-217ENST00000589228 ANKLE2Q86XL3 938 aa14.39□□□□□ -0.11
PRKAR1A-217ENST00000589228 SMC5Q8IY18 1101 aa14.39□□□□□ -0.11
PRKAR1A-217ENST00000589228 A0A1W2PP64 1363 aa14.39□□□□□ -0.11
PRKAR1A-217ENST00000589228 GLRX3O76003 335 aaKnown RBP14.39□□□□□ -0.11
PRKAR1A-217ENST00000589228 DNAAF4Q8WXU2 420 aa14.39□□□□□ -0.11
PRKAR1A-217ENST00000589228 PPP1R42Q7Z4L9 355 aa14.38□□□□□ -0.11
PRKAR1A-217ENST00000589228 RRP12Q5JTH9 1297 aaKnown RBP14.38□□□□□ -0.11
PRKAR1A-217ENST00000589228 TOM1L2Q6ZVM7 507 aa14.38□□□□□ -0.11
PRKAR1A-217ENST00000589228 MTMR7Q9Y216 660 aa14.38□□□□□ -0.11
PRKAR1A-217ENST00000589228 SHANK2Q9UPX8 1470 aa14.38□□□□□ -0.11
PRKAR1A-217ENST00000589228 EIF4A2Q14240 407 aaKnown RBP14.38□□□□□ -0.11
PRKAR1A-217ENST00000589228 ARHGAP45Q92619 1136 aa14.38□□□□□ -0.11
PRKAR1A-217ENST00000589228 TNMDQ9H2S6 317 aa14.38□□□□□ -0.11
PRKAR1A-217ENST00000589228 SAMD9Q5K651 1589 aa14.38□□□□□ -0.11
PRKAR1A-217ENST00000589228 CAMK4Q16566 473 aa14.38□□□□□ -0.11
PRKAR1A-217ENST00000589228 JARID2Q92833 1246 aaPredicted RBP14.38□□□□□ -0.11
PRKAR1A-217ENST00000589228 ADGRL2O95490 1459 aa14.38□□□□□ -0.11
PRKAR1A-217ENST00000589228 TPM3P06753 285 aa14.37□□□□□ -0.11
PRKAR1A-217ENST00000589228 MARCH6O60337 910 aa14.37□□□□□ -0.11
PRKAR1A-217ENST00000589228 CCDC192P0DO97 292 aa14.37□□□□□ -0.11
PRKAR1A-217ENST00000589228 ME1P48163 572 aa14.37□□□□□ -0.11
PRKAR1A-217ENST00000589228 ZSCAN30Q86W11 494 aa14.37□□□□□ -0.11
PRKAR1A-217ENST00000589228 PHF8Q9UPP1 1060 aa14.37□□□□□ -0.11
PRKAR1A-217ENST00000589228 PTPRCP08575 1304 aa14.37□□□□□ -0.11
PRKAR1A-217ENST00000589228 PPFIA3O75145 1194 aa14.36□□□□□ -0.11
PRKAR1A-217ENST00000589228 ANKRD44Q8N8A2 993 aa14.36□□□□□ -0.11
PRKAR1A-217ENST00000589228 STK38Q15208 465 aa14.36□□□□□ -0.11
PRKAR1A-217ENST00000589228 TTC21BQ7Z4L5 1316 aa14.36□□□□□ -0.11
PRKAR1A-217ENST00000589228 RAB11FIP3O75154 756 aa14.36□□□□□ -0.11
PRKAR1A-217ENST00000589228 SAFBQ15424 915 aaKnown RBP eCLIP14.36□□□□□ -0.11
PRKAR1A-217ENST00000589228 SPATA32Q96LK8 384 aa14.36□□□□□ -0.11
PRKAR1A-217ENST00000589228 ERICH2A1L162 156 aa14.35□□□□□ -0.11
PRKAR1A-217ENST00000589228 RAD21O60216 631 aa14.35□□□□□ -0.11
PRKAR1A-217ENST00000589228 LETM1O95202 739 aaPredicted RBP14.35□□□□□ -0.11
PRKAR1A-217ENST00000589228 PRDM11Q9NQV5 511 aa14.35□□□□□ -0.11
PRKAR1A-217ENST00000589228 TRIM35Q9UPQ4 493 aa14.35□□□□□ -0.11
PRKAR1A-217ENST00000589228 PDE1AP54750 535 aa14.35□□□□□ -0.11
PRKAR1A-217ENST00000589228 KIF21AQ7Z4S6 1674 aa14.35□□□□□ -0.11
PRKAR1A-217ENST00000589228 CNNM1Q9NRU3 951 aa14.35□□□□□ -0.11
PRKAR1A-217ENST00000589228 OTUD7AQ8TE49 926 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms