RNA–Protein interactions for RNA: ENST00000586944.5

PTBP1-210, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 4,661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-210ENST00000586944 C8orf34Q49A92 452 aa20.77■□□□□ 0.92
PTBP1-210ENST00000586944 UHRF1BP1Q6BDS2 1440 aa20.77■□□□□ 0.92
PTBP1-210ENST00000586944 POGZQ7Z3K3 1410 aa20.77■□□□□ 0.92
PTBP1-210ENST00000586944 R3HCC1Q9Y3T6 440 aaKnown RBP20.77■□□□□ 0.92
PTBP1-210ENST00000586944 CCDC85AQ96PX6 553 aaPredicted RBP20.77■□□□□ 0.92
PTBP1-210ENST00000586944 C8orf58Q8NAV2 365 aa20.77■□□□□ 0.91
PTBP1-210ENST00000586944 SAMD9Q5K651 1589 aa20.76■□□□□ 0.91
PTBP1-210ENST00000586944 KCNH5Q8NCM2 988 aa20.76■□□□□ 0.91
PTBP1-210ENST00000586944 WDR33Q9C0J8 1336 aaKnown RBP20.76■□□□□ 0.91
PTBP1-210ENST00000586944 ABCA5Q8WWZ7 1642 aa20.76■□□□□ 0.91
PTBP1-210ENST00000586944 KIF1BPQ96EK5 621 aa20.76■□□□□ 0.91
PTBP1-210ENST00000586944 TSPY26PQ9H489 355 aa20.76■□□□□ 0.91
PTBP1-210ENST00000586944 DMRT2Q9Y5R5 561 aa20.76■□□□□ 0.91
PTBP1-210ENST00000586944 BMP2KLQ5H9B9 411 aa20.75■□□□□ 0.91
PTBP1-210ENST00000586944 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.75■□□□□ 0.91
PTBP1-210ENST00000586944 BCL11BQ9C0K0 894 aaPredicted RBP20.75■□□□□ 0.91
PTBP1-210ENST00000586944 COL17A1Q9UMD9 1497 aaPredicted RBP20.75■□□□□ 0.91
PTBP1-210ENST00000586944 WDR7Q9Y4E6 1490 aa20.75■□□□□ 0.91
PTBP1-210ENST00000586944 ERICH2A1L162 156 aa20.75■□□□□ 0.91
PTBP1-210ENST00000586944 ANXA1P04083 346 aa20.75■□□□□ 0.91
PTBP1-210ENST00000586944 LARP1BQ659C4 914 aaKnown RBP20.74■□□□□ 0.91
PTBP1-210ENST00000586944 PHACTR3Q96KR7 559 aa20.74■□□□□ 0.91
PTBP1-210ENST00000586944 ATP2B1P20020 1258 aa20.74■□□□□ 0.91
PTBP1-210ENST00000586944 BLOC1S2Q6QNY1 142 aa20.74■□□□□ 0.91
PTBP1-210ENST00000586944 TSPYL6Q8N831 410 aa20.74■□□□□ 0.91
PTBP1-210ENST00000586944 CCAR2Q8N163 923 aaKnown RBP20.74■□□□□ 0.91
PTBP1-210ENST00000586944 NCKAP5LQ9HCH0 1330 aa20.74■□□□□ 0.91
PTBP1-210ENST00000586944 ADGRL2O95490 1459 aa20.74■□□□□ 0.91
PTBP1-210ENST00000586944 PTCD1O75127 700 aaKnown RBP20.74■□□□□ 0.91
PTBP1-210ENST00000586944 SSFA2P28290 1259 aa20.74■□□□□ 0.91
PTBP1-210ENST00000586944 MEIS3Q99687 375 aa20.74■□□□□ 0.91
PTBP1-210ENST00000586944 HDAC1Q13547 482 aaPredicted RBP20.73■□□□□ 0.91
PTBP1-210ENST00000586944 FKBP4Q02790 459 aaKnown RBP eCLIP20.73■□□□□ 0.912e-6■■■□□ 19
PTBP1-210ENST00000586944 KIF6Q6ZMV9 814 aa20.73■□□□□ 0.91
PTBP1-210ENST00000586944 CNNM1Q9NRU3 951 aa20.73■□□□□ 0.91
PTBP1-210ENST00000586944 RAD21O60216 631 aa20.72■□□□□ 0.91
PTBP1-210ENST00000586944 PIK3C2GO75747 1445 aa20.72■□□□□ 0.91
PTBP1-210ENST00000586944 ZNF518AQ6AHZ1 1483 aa20.72■□□□□ 0.91
PTBP1-210ENST00000586944 PDRG1Q9NUG6 133 aa20.72■□□□□ 0.91
PTBP1-210ENST00000586944 SAFBQ15424 915 aaKnown RBP eCLIP20.72■□□□□ 0.91
PTBP1-210ENST00000586944 VPS53Q5VIR6 699 aa20.72■□□□□ 0.91
PTBP1-210ENST00000586944 KRT24Q2M2I5 525 aa20.72■□□□□ 0.91
PTBP1-210ENST00000586944 CASTP20810 708 aaKnown RBP20.71■□□□□ 0.91
PTBP1-210ENST00000586944 DNAAF4Q8WXU2 420 aa20.71■□□□□ 0.91
PTBP1-210ENST00000586944 TNPO1Q92973 898 aaKnown RBP20.71■□□□□ 0.91
PTBP1-210ENST00000586944 TRIM5Q9C035 493 aa20.71■□□□□ 0.91
PTBP1-210ENST00000586944 BOLA2Q9H3K6 86 aa20.71■□□□□ 0.91
PTBP1-210ENST00000586944 CCDC158Q5M9N0 1113 aa20.71■□□□□ 0.91
PTBP1-210ENST00000586944 CCDC39Q9UFE4 941 aa20.71■□□□□ 0.91
PTBP1-210ENST00000586944 FMNL2Q96PY5 1086 aa20.71■□□□□ 0.91
PTBP1-210ENST00000586944 TBC1D2BQ9UPU7 963 aa20.71■□□□□ 0.91
PTBP1-210ENST00000586944 TTC21BQ7Z4L5 1316 aa20.71■□□□□ 0.91
PTBP1-210ENST00000586944 NUCB1Q02818 461 aa20.71■□□□□ 0.91
PTBP1-210ENST00000586944 CCDC173Q0VFZ6 552 aa20.71■□□□□ 0.91
PTBP1-210ENST00000586944 LARP6Q9BRS8 491 aaKnown RBP20.71■□□□□ 0.91
PTBP1-210ENST00000586944 PTPRCP08575 1304 aa20.7■□□□□ 0.9
PTBP1-210ENST00000586944 GLRX3O76003 335 aaKnown RBP20.7■□□□□ 0.9
PTBP1-210ENST00000586944 TPM3P06753 285 aa20.7■□□□□ 0.9
PTBP1-210ENST00000586944 RRP12Q5JTH9 1297 aaKnown RBP20.7■□□□□ 0.9
PTBP1-210ENST00000586944 SEC24BO95487 1268 aa20.7■□□□□ 0.9
PTBP1-210ENST00000586944 TTC39AQ5SRH9 613 aa20.7■□□□□ 0.9
PTBP1-210ENST00000586944 FERMT3Q86UX7 667 aa20.7■□□□□ 0.9
PTBP1-210ENST00000586944 CCDC8Q9H0W5 538 aaPredicted RBP20.7■□□□□ 0.9
PTBP1-210ENST00000586944 NOL10Q9BSC4 688 aaKnown RBP20.69■□□□□ 0.9
PTBP1-210ENST00000586944 SPATA31E1Q6ZUB1 1445 aa20.69■□□□□ 0.9
PTBP1-210ENST00000586944 DHX16O60231 1041 aaKnown RBP20.69■□□□□ 0.9
PTBP1-210ENST00000586944 A0A1W2PP64 1363 aa20.69■□□□□ 0.9
PTBP1-210ENST00000586944 CCDC57Q2TAC2 916 aa20.69■□□□□ 0.9
PTBP1-210ENST00000586944 STK11IPQ8N1F8 1099 aa20.69■□□□□ 0.9
PTBP1-210ENST00000586944 PPP6R1Q9UPN7 881 aa20.69■□□□□ 0.9
PTBP1-210ENST00000586944 MTMR7Q9Y216 660 aa20.69■□□□□ 0.9
PTBP1-210ENST00000586944 PRPF40BQ6NWY9 871 aaKnown RBP20.69■□□□□ 0.9
PTBP1-210ENST00000586944 HOMER1Q86YM7 354 aa20.69■□□□□ 0.9
PTBP1-210ENST00000586944 KINO60870 393 aaKnown RBP20.68■□□□□ 0.9
PTBP1-210ENST00000586944 PI4KAP2A4QPH2 592 aa20.68■□□□□ 0.9
PTBP1-210ENST00000586944 EIF4A2Q14240 407 aaKnown RBP20.68■□□□□ 0.9
PTBP1-210ENST00000586944 PI4KAP1Q8N8J0 262 aa20.68■□□□□ 0.9
PTBP1-210ENST00000586944 SPC24Q8NBT2 197 aa20.68■□□□□ 0.9
PTBP1-210ENST00000586944 CEP126Q9P2H0 1117 aa20.68■□□□□ 0.9
PTBP1-210ENST00000586944 MRPL50Q8N5N7 158 aaKnown RBP20.68■□□□□ 0.9
PTBP1-210ENST00000586944 ARHGAP45Q92619 1136 aa20.68■□□□□ 0.9
PTBP1-210ENST00000586944 KRT85P78386 507 aa20.67■□□□□ 0.9
PTBP1-210ENST00000586944 VAMP4O75379 141 aa20.67■□□□□ 0.9
PTBP1-210ENST00000586944 SYCE3A1L190 88 aa20.67■□□□□ 0.9
PTBP1-210ENST00000586944 CCDC83Q8IWF9 413 aa20.67■□□□□ 0.9
PTBP1-210ENST00000586944 C16orf71Q8IYS4 520 aaPredicted RBP20.67■□□□□ 0.9
PTBP1-210ENST00000586944 MYD88Q99836 296 aa20.67■□□□□ 0.9
PTBP1-210ENST00000586944 PPIP5K1Q6PFW1 1433 aa20.67■□□□□ 0.9
PTBP1-210ENST00000586944 EIF2AK4Q9P2K8 1649 aaKnown RBP20.66■□□□□ 0.9
PTBP1-210ENST00000586944 AMOTL1Q8IY63 956 aa20.66■□□□□ 0.9
PTBP1-210ENST00000586944 RAB11FIP3O75154 756 aa20.66■□□□□ 0.9
PTBP1-210ENST00000586944 ANKRD1Q15327 319 aa20.66■□□□□ 0.9
PTBP1-210ENST00000586944 PBRM1Q86U86 1689 aa20.66■□□□□ 0.9
PTBP1-210ENST00000586944 VSIG10Q8N0Z9 540 aa20.66■□□□□ 0.9
PTBP1-210ENST00000586944 KDM6BO15054 1643 aa20.66■□□□□ 0.9
PTBP1-210ENST00000586944 DBF4Q9UBU7 674 aaPredicted RBP20.66■□□□□ 0.9
PTBP1-210ENST00000586944 LETM1O95202 739 aaPredicted RBP20.65■□□□□ 0.9
PTBP1-210ENST00000586944 TTC22Q5TAA0 569 aa20.65■□□□□ 0.9
PTBP1-210ENST00000586944 LARP1Q6PKG0 1096 aaKnown RBP20.65■□□□□ 0.9
PTBP1-210ENST00000586944 PPP1R42Q7Z4L9 355 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms