RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 PHLPP1O60346 1717 aa0.83□□□□□ -2.28
CEP290-203ENST00000547691 RGPD1P0DJD0 1748 aa0.83□□□□□ -2.28
CEP290-203ENST00000547691 TIAM1Q13009 1591 aa0.83□□□□□ -2.28
CEP290-203ENST00000547691 ZNF454Q8N9F8 522 aa0.83□□□□□ -2.28
CEP290-203ENST00000547691 KLF16Q9BXK1 252 aaPredicted RBP0.83□□□□□ -2.28
CEP290-203ENST00000547691 GOLGA3Q08378 1498 aa0.83□□□□□ -2.28
CEP290-203ENST00000547691 UHRF1BP1Q6BDS2 1440 aa0.83□□□□□ -2.28
CEP290-203ENST00000547691 A2ML1A8K2U0 1454 aa0.83□□□□□ -2.28
CEP290-203ENST00000547691 PKN1Q16512 942 aa0.83□□□□□ -2.28
CEP290-203ENST00000547691 NEXMIFQ5QGS0 1516 aa0.83□□□□□ -2.28
CEP290-203ENST00000547691 HECTD4Q9Y4D8 3996 aa0.83□□□□□ -2.28
CEP290-203ENST00000547691 TET3O43151 1660 aa0.83□□□□□ -2.28
CEP290-203ENST00000547691 CARMIL2Q6F5E8 1435 aa0.83□□□□□ -2.28
CEP290-203ENST00000547691 TRAPPC8Q9Y2L5 1435 aa0.83□□□□□ -2.28
CEP290-203ENST00000547691 ALYREFQ86V81 257 aaKnown RBP0.83□□□□□ -2.28
CEP290-203ENST00000547691 PRR14Q9BWN1 585 aa0.83□□□□□ -2.28
CEP290-203ENST00000547691 ABCA3Q99758 1704 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 CRYBG1Q9Y4K1 1723 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 PLEKHH2Q8IVE3 1493 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 SHANK2Q9UPX8 1470 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 CHD2O14647 1828 aaKnown RBP0.82□□□□□ -2.28
CEP290-203ENST00000547691 SAMD9LQ8IVG5 1584 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 OXER1Q8TDS5 423 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 CHMP7Q8WUX9 453 aaPredicted RBP0.82□□□□□ -2.28
CEP290-203ENST00000547691 WBP1LQ9NX94 342 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 QRICH2Q9H0J4 1663 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 NUP188Q5SRE5 1749 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 CDC42BPAQ5VT25 1732 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 WDR87Q6ZQQ6 2873 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 KIAA1210Q9ULL0 1709 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 PTPRGP23470 1445 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 PRAG1Q86YV5 1406 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 DENND4BO75064 1496 aaPredicted RBP0.82□□□□□ -2.28
CEP290-203ENST00000547691 MAST1Q9Y2H9 1570 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 BAG6P46379 1132 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 RGS17Q9UGC6 210 aaPredicted RBP0.82□□□□□ -2.28
CEP290-203ENST00000547691 PRKDCP78527 4128 aaKnown RBP0.82□□□□□ -2.28
CEP290-203ENST00000547691 KMT2CQ8NEZ4 4911 aaKnown RBP0.82□□□□□ -2.28
CEP290-203ENST00000547691 TRPM4Q8TD43 1214 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 C5orf42Q9H799 3197 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 FAM135BQ49AJ0 1406 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 NRAPQ86VF7 1730 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 VEGFBP49765 207 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 JPH4Q96JJ6 628 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 RRAGCQ9HB90 399 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 NCOA3Q9Y6Q9 1424 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 NKTRP30414 1462 aaKnown RBP0.82□□□□□ -2.28
CEP290-203ENST00000547691 SETBP1Q9Y6X0 1596 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 NWD2Q9ULI1 1742 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 WNK3Q9BYP7 1800 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 XRN1Q8IZH2 1706 aaKnown RBP0.82□□□□□ -2.28
CEP290-203ENST00000547691 IQGAP3Q86VI3 1631 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 ZNF518AQ6AHZ1 1483 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 UPP2O95045 317 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 ATP13A2Q9NQ11 1180 aa0.82□□□□□ -2.28
CEP290-203ENST00000547691 BRWD3Q6RI45 1802 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 NUP153P49790 1475 aaKnown RBP0.81□□□□□ -2.28
CEP290-203ENST00000547691 NCOA2Q15596 1464 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 IGF1RP08069 1367 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 FRYLO94915 3013 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 MEGF8Q7Z7M0 2845 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 NALCNQ8IZF0 1738 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 THSD7AQ9UPZ6 1657 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 PIK3C2BO00750 1634 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 ADGRB3O60242 1522 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 NLRP1Q9C000 1473 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 DISP2A7MBM2 1401 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 FOXR1Q6PIV2 292 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 PACS2Q86VP3 889 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 TRIM47Q96LD4 638 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 CICQ96RK0 1608 aaPredicted RBP0.81□□□□□ -2.28
CEP290-203ENST00000547691 EFCAB6Q5THR3 1501 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 PZPP20742 1482 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 PLCH2O75038 1416 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 SHANK3Q9BYB0 1731 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 RYR3Q15413 4870 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 FRAS1Q86XX4 4008 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 COL9A1P20849 921 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 CNTNAP3BQ96NU0 1288 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 SPOCK3Q9BQ16 436 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 CNTNAP3Q9BZ76 1288 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 NSFL1CQ9UNZ2 370 aaKnown RBP0.81□□□□□ -2.28
CEP290-203ENST00000547691 WASF2Q9Y6W5 498 aa0.81□□□□□ -2.28
CEP290-203ENST00000547691 LMTK2Q8IWU2 1503 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 SPRYD7Q5W111 196 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 TRPM1Q7Z4N2 1603 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 ANK2Q01484 3957 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 CEP350Q5VT06 3117 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 RALGAPBQ86X10 1494 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 SCAF11Q99590 1463 aaKnown RBP0.8□□□□□ -2.28
CEP290-203ENST00000547691 PRXQ9BXM0 1461 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 C2orf72A6NCS6 295 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 C3orf80F5H4A9 247 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 DCAF8L2P0C7V8 631 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 SNRPBP14678 240 aaKnown RBP0.8□□□□□ -2.28
CEP290-203ENST00000547691 PKD2Q13563 968 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 DACH1Q9UI36 760 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 VIRMAQ69YN4 1812 aaKnown RBP0.8□□□□□ -2.28
CEP290-203ENST00000547691 TMEM131LA2VDJ0 1609 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 ARHGEF5Q12774 1597 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms