RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 AEBP2Q6ZN18 517 aaPredicted RBP4.24□□□□□ -1.73
CEP290-203ENST00000547691 POTEDQ86YR6 584 aa4.16□□□□□ -1.74
CEP290-203ENST00000547691 FOXD1Q16676 465 aa3.29□□□□□ -1.88
CEP290-203ENST00000547691 CHIC1Q5VXU3 224 aa3.26□□□□□ -1.89
CEP290-203ENST00000547691 SENP3Q9H4L4 574 aaPredicted RBP3.2□□□□□ -1.9
CEP290-203ENST00000547691 DNAJC5BQ9UF47 199 aa3.1□□□□□ -1.91
CEP290-203ENST00000547691 PHF23Q9BUL5 403 aaPredicted RBP3.07□□□□□ -1.92
CEP290-203ENST00000547691 MSH5O43196 834 aa3.06□□□□□ -1.92
CEP290-203ENST00000547691 RNF39Q9H2S5 420 aa2.9□□□□□ -1.94
CEP290-203ENST00000547691 POTEHQ6S545 545 aa2.9□□□□□ -1.95
CEP290-203ENST00000547691 KRTAP17-1Q9BYP8 105 aa2.87□□□□□ -1.95
CEP290-203ENST00000547691 DMRT2Q9Y5R5 561 aa2.76□□□□□ -1.97
CEP290-203ENST00000547691 PPP6R1Q9UPN7 881 aa2.7□□□□□ -1.98
CEP290-203ENST00000547691 HOXD11P31277 338 aaPredicted RBP2.62□□□□□ -1.99
CEP290-203ENST00000547691 LCE2DQ5TA82 110 aaPredicted RBP2.59□□□□□ -2
CEP290-203ENST00000547691 C1QBPQ07021 282 aaKnown RBP2.57□□□□□ -2
CEP290-203ENST00000547691 SP7Q8TDD2 431 aaPredicted RBP2.51□□□□□ -2.01
CEP290-203ENST00000547691 CACNB1Q02641 598 aaPredicted RBP2.41□□□□□ -2.02
CEP290-203ENST00000547691 DSG3P32926 999 aa2.4□□□□□ -2.02
CEP290-203ENST00000547691 POTEIP0CG38 1075 aa2.39□□□□□ -2.03
CEP290-203ENST00000547691 PIAS4Q8N2W9 510 aaPredicted RBP2.36□□□□□ -2.03
CEP290-203ENST00000547691 EVX2Q03828 476 aa2.35□□□□□ -2.03
CEP290-203ENST00000547691 FXR2P51116 673 aaKnown RBP eCLIP2.34□□□□□ -2.04
CEP290-203ENST00000547691 MAPK8IP2Q13387 824 aaPredicted RBP2.34□□□□□ -2.04
CEP290-203ENST00000547691 PCDH10Q9P2E7 1040 aa2.32□□□□□ -2.04
CEP290-203ENST00000547691 ADRA2BP18089 450 aa2.26□□□□□ -2.05
CEP290-203ENST00000547691 RBAK-RBAKDNI3L0D1 243 aa2.25□□□□□ -2.05
CEP290-203ENST00000547691 POTEJP0CG39 1038 aa2.25□□□□□ -2.05
CEP290-203ENST00000547691 C19orf67A6NJJ6 358 aa2.23□□□□□ -2.05
CEP290-203ENST00000547691 OTUD5Q96G74 571 aa2.22□□□□□ -2.05
CEP290-203ENST00000547691 POTEB2H3BUK9 544 aa2.22□□□□□ -2.05
CEP290-203ENST00000547691 RNF216Q9NWF9 866 aaPredicted RBP2.2□□□□□ -2.06
CEP290-203ENST00000547691 KMT2BQ9UMN6 2715 aaPredicted RBP2.18□□□□□ -2.06
CEP290-203ENST00000547691 LHX8Q68G74 356 aa2.17□□□□□ -2.06
CEP290-203ENST00000547691 PIP4P2Q8N4L2 257 aa2.15□□□□□ -2.07
CEP290-203ENST00000547691 LOC100996750A0A140TA64 210 aa2.15□□□□□ -2.07
CEP290-203ENST00000547691 KRTAP4-6Q9BYQ5 205 aa2.15□□□□□ -2.07
CEP290-203ENST00000547691 CHRDL2Q6WN34 429 aa2.11□□□□□ -2.07
CEP290-203ENST00000547691 U3KPZ7 1027 aaPredicted RBP2.08□□□□□ -2.08
CEP290-203ENST00000547691 POTEFA5A3E0 1075 aa2.04□□□□□ -2.08
CEP290-203ENST00000547691 GABBR2O75899 941 aa2.01□□□□□ -2.09
CEP290-203ENST00000547691 CLCN6P51797 869 aa2□□□□□ -2.09
CEP290-203ENST00000547691 PLPPR3Q6T4P5 718 aa1.98□□□□□ -2.09
CEP290-203ENST00000547691 POTEMA6NI47 508 aa1.98□□□□□ -2.09
CEP290-203ENST00000547691 LCE2AQ5TA79 106 aaPredicted RBP1.96□□□□□ -2.1
CEP290-203ENST00000547691 SPINK5Q9NQ38 1064 aaPredicted RBP1.96□□□□□ -2.1
CEP290-203ENST00000547691 SLC4A2P04920 1241 aa1.93□□□□□ -2.1
CEP290-203ENST00000547691 AKT1S1Q96B36 256 aa1.92□□□□□ -2.1
CEP290-203ENST00000547691 ILDR1Q86SU0 546 aaPredicted RBP1.92□□□□□ -2.1
CEP290-203ENST00000547691 POTEGQ6S5H5 508 aa1.91□□□□□ -2.1
CEP290-203ENST00000547691 ASTLQ6HA08 431 aaPredicted RBP1.91□□□□□ -2.1
CEP290-203ENST00000547691 KRTAP3-3Q9BYR6 98 aa1.9□□□□□ -2.11
CEP290-203ENST00000547691 KRTAP3-2Q9BYR7 98 aa1.9□□□□□ -2.11
CEP290-203ENST00000547691 MMRN1Q13201 1228 aa1.89□□□□□ -2.11
CEP290-203ENST00000547691 LCE2BO14633 110 aa1.89□□□□□ -2.11
CEP290-203ENST00000547691 SPNS2Q8IVW8 549 aa1.88□□□□□ -2.11
CEP290-203ENST00000547691 PELP1Q8IZL8 1130 aaKnown RBP1.88□□□□□ -2.11
CEP290-203ENST00000547691 PITPNM1O00562 1244 aa1.88□□□□□ -2.11
CEP290-203ENST00000547691 POTEB3A0JP26 581 aa1.87□□□□□ -2.11
CEP290-203ENST00000547691 POTEBQ6S5H4 581 aa1.87□□□□□ -2.11
CEP290-203ENST00000547691 REM2Q8IYK8 340 aaPredicted RBP1.87□□□□□ -2.11
CEP290-203ENST00000547691 CNKSR2Q8WXI2 1034 aa1.86□□□□□ -2.11
CEP290-203ENST00000547691 ZNF579Q8NAF0 562 aaKnown RBP1.85□□□□□ -2.11
CEP290-203ENST00000547691 KRTAP4-8Q9BYQ9 185 aa1.85□□□□□ -2.11
CEP290-203ENST00000547691 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.84□□□□□ -2.12
CEP290-203ENST00000547691 MNX1P50219 401 aaPredicted RBP1.83□□□□□ -2.12
CEP290-203ENST00000547691 IFFO2Q5TF58 517 aa1.8□□□□□ -2.12
CEP290-203ENST00000547691 SSUH2Q9Y2M2 353 aa1.78□□□□□ -2.12
CEP290-203ENST00000547691 KRTAP4-12Q9BQ66 201 aa1.78□□□□□ -2.12
CEP290-203ENST00000547691 KRTAP9-2Q9BYQ4 174 aa1.78□□□□□ -2.12
CEP290-203ENST00000547691 RBM42Q9BTD8 480 aaKnown RBP1.78□□□□□ -2.13
CEP290-203ENST00000547691 SCAF1Q9H7N4 1312 aaKnown RBP1.74□□□□□ -2.13
CEP290-203ENST00000547691 KRTAP9-9Q9BYP9 154 aa1.73□□□□□ -2.13
CEP290-203ENST00000547691 KRTAP9-4Q9BYQ2 154 aa1.73□□□□□ -2.13
CEP290-203ENST00000547691 KRTAP9-6A0A140TA67 174 aa1.71□□□□□ -2.14
CEP290-203ENST00000547691 DCAF8L1A6NGE4 600 aa1.7□□□□□ -2.14
CEP290-203ENST00000547691 PLSCR2Q9NRY7 297 aa1.7□□□□□ -2.14
CEP290-203ENST00000547691 KRTAP4-2Q9BYR5 136 aa1.69□□□□□ -2.14
CEP290-203ENST00000547691 ATMINO43313 823 aaPredicted RBP1.69□□□□□ -2.14
CEP290-203ENST00000547691 KRTAP4-8A0A0G2JLE6 195 aa1.67□□□□□ -2.14
CEP290-203ENST00000547691 IGSF5Q9NSI5 407 aa1.66□□□□□ -2.14
CEP290-203ENST00000547691 CDAN1Q8IWY9 1227 aa1.66□□□□□ -2.14
CEP290-203ENST00000547691 KDM4FA0A1W2PPD8 638 aa1.65□□□□□ -2.15
CEP290-203ENST00000547691 LORP23490 312 aaPredicted RBP1.65□□□□□ -2.15
CEP290-203ENST00000547691 PPP4R3CPQ6ZMV5 832 aa1.65□□□□□ -2.15
CEP290-203ENST00000547691 KRTAP4-7Q9BYR0 210 aa1.65□□□□□ -2.15
CEP290-203ENST00000547691 ST18O60284 1047 aa1.64□□□□□ -2.15
CEP290-203ENST00000547691 RGS20O76081 388 aa1.63□□□□□ -2.15
CEP290-203ENST00000547691 PROM2Q8N271 834 aa1.62□□□□□ -2.15
CEP290-203ENST00000547691 ZNF219Q9P2Y4 722 aaPredicted RBP1.62□□□□□ -2.15
CEP290-203ENST00000547691 LCE2CQ5TA81 110 aa1.62□□□□□ -2.15
CEP290-203ENST00000547691 ATF5Q9Y2D1 282 aaPredicted RBP1.62□□□□□ -2.15
CEP290-203ENST00000547691 MKRN4PQ13434 485 aaPredicted RBP1.62□□□□□ -2.15
CEP290-203ENST00000547691 EP400Q96L91 3159 aa1.61□□□□□ -2.15
CEP290-203ENST00000547691 ZFHX3Q15911 3703 aa1.6□□□□□ -2.15
CEP290-203ENST00000547691 RGS19P49795 217 aa1.6□□□□□ -2.15
CEP290-203ENST00000547691 KRTAP19-1Q8IUB9 90 aa1.6□□□□□ -2.15
CEP290-203ENST00000547691 GALR2O43603 387 aaPredicted RBP1.6□□□□□ -2.15
CEP290-203ENST00000547691 TMEM121BQ9BXQ6 578 aaPredicted RBP1.59□□□□□ -2.15
CEP290-203ENST00000547691 NPM3O75607 178 aaKnown RBP1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms