RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 SCAPERQ9BY12 1400 aa6.53□□□□□ -1.36
SNHG1-208ENST00000538266 LINC01559Q495D7 138 aa6.53□□□□□ -1.36
SNHG1-208ENST00000538266 SPRYD7Q5W111 196 aa6.53□□□□□ -1.36
SNHG1-208ENST00000538266 GDPD2Q9HCC8 539 aa6.53□□□□□ -1.36
SNHG1-208ENST00000538266 NDUFB9Q9Y6M9 179 aa6.53□□□□□ -1.36
SNHG1-208ENST00000538266 V9GY48 417 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-208ENST00000538266 SYCP2Q9BX26 1530 aa6.53□□□□□ -1.36
SNHG1-208ENST00000538266 PTPN23Q9H3S7 1636 aa6.53□□□□□ -1.36
SNHG1-208ENST00000538266 DENND4BO75064 1496 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-208ENST00000538266 ZNF518AQ6AHZ1 1483 aa6.53□□□□□ -1.36
SNHG1-208ENST00000538266 SH3BP2P78314 561 aa6.52□□□□□ -1.37
SNHG1-208ENST00000538266 FAM50AQ14320 339 aaKnown RBP6.52□□□□□ -1.37
SNHG1-208ENST00000538266 TBC1D2BQ9UPU7 963 aa6.52□□□□□ -1.37
SNHG1-208ENST00000538266 POGZQ7Z3K3 1410 aa6.51□□□□□ -1.37
SNHG1-208ENST00000538266 KIAA1107Q9UPP5 1409 aa6.51□□□□□ -1.37
SNHG1-208ENST00000538266 AGERQ15109 404 aa6.51□□□□□ -1.37
SNHG1-208ENST00000538266 NBPF14Q5TI25 921 aa6.51□□□□□ -1.37
SNHG1-208ENST00000538266 PDXDC2PQ6P474 469 aa6.51□□□□□ -1.37
SNHG1-208ENST00000538266 ZNF598Q86UK7 904 aaKnown RBP6.51□□□□□ -1.37
SNHG1-208ENST00000538266 ZNF511Q8NB15 262 aa6.51□□□□□ -1.37
SNHG1-208ENST00000538266 POM121Q96HA1 1249 aa6.51□□□□□ -1.37
SNHG1-208ENST00000538266 COG6Q9Y2V7 657 aa6.51□□□□□ -1.37
SNHG1-208ENST00000538266 ZNF644Q9H582 1327 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-208ENST00000538266 RICTORQ6R327 1708 aa6.5□□□□□ -1.37
SNHG1-208ENST00000538266 FRMPD1Q5SYB0 1578 aa6.5□□□□□ -1.37
SNHG1-208ENST00000538266 CCDC141Q6ZP82 1450 aa6.5□□□□□ -1.37
SNHG1-208ENST00000538266 RGS20O76081 388 aa6.5□□□□□ -1.37
SNHG1-208ENST00000538266 RAPGEF3O95398 923 aa6.5□□□□□ -1.37
SNHG1-208ENST00000538266 ABL2P42684 1182 aa6.5□□□□□ -1.37
SNHG1-208ENST00000538266 WNT7BP56706 349 aa6.5□□□□□ -1.37
SNHG1-208ENST00000538266 SKOR1P84550 965 aa6.5□□□□□ -1.37
SNHG1-208ENST00000538266 PTK2Q05397 1052 aa6.5□□□□□ -1.37
SNHG1-208ENST00000538266 GPKOWQ92917 476 aaPredicted RBP eCLIP6.5□□□□□ -1.372e-31■■■□□ 17.2
SNHG1-208ENST00000538266 CLUAP1Q96AJ1 413 aa6.5□□□□□ -1.37
SNHG1-208ENST00000538266 ZMYM4Q5VZL5 1548 aa6.5□□□□□ -1.37
SNHG1-208ENST00000538266 ZC3H4Q9UPT8 1303 aaKnown RBP6.5□□□□□ -1.37
SNHG1-208ENST00000538266 KDM5CP41229 1560 aa6.49□□□□□ -1.37
SNHG1-208ENST00000538266 ARHGEF5Q12774 1597 aa6.49□□□□□ -1.37
SNHG1-208ENST00000538266 HECW2Q9P2P5 1572 aa6.49□□□□□ -1.37
SNHG1-208ENST00000538266 TCOF1Q13428 1488 aaKnown RBP6.49□□□□□ -1.37
SNHG1-208ENST00000538266 COL17A1Q9UMD9 1497 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-208ENST00000538266 HNRNPMP52272 730 aaKnown RBP eCLIP6.49□□□□□ -1.37
SNHG1-208ENST00000538266 RC3H1Q5TC82 1133 aaKnown RBP6.49□□□□□ -1.37
SNHG1-208ENST00000538266 ZNF697Q5TEC3 545 aa6.49□□□□□ -1.37
SNHG1-208ENST00000538266 C14orf37Q86TY3 774 aa6.49□□□□□ -1.37
SNHG1-208ENST00000538266 BPHLQ86WA6 291 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-208ENST00000538266 FOXJ1Q92949 421 aa6.49□□□□□ -1.37
SNHG1-208ENST00000538266 ZMYND15Q9H091 742 aa6.49□□□□□ -1.37
SNHG1-208ENST00000538266 ARHGEF12Q9NZN5 1544 aa6.49□□□□□ -1.37
SNHG1-208ENST00000538266 TRAPPC8Q9Y2L5 1435 aa6.49□□□□□ -1.37
SNHG1-208ENST00000538266 MAGI2Q86UL8 1455 aa6.48□□□□□ -1.37
SNHG1-208ENST00000538266 DNMT1P26358 1616 aaKnown RBP6.48□□□□□ -1.37
SNHG1-208ENST00000538266 TSPY4P0CV99 314 aa6.48□□□□□ -1.37
SNHG1-208ENST00000538266 TSPY10P0CW01 314 aa6.48□□□□□ -1.37
SNHG1-208ENST00000538266 FOXC1Q12948 553 aa6.48□□□□□ -1.37
SNHG1-208ENST00000538266 ERICH6Q7L0X2 663 aa6.48□□□□□ -1.37
SNHG1-208ENST00000538266 ZBTB33Q86T24 672 aa6.48□□□□□ -1.37
SNHG1-208ENST00000538266 WWC1Q8IX03 1113 aa6.48□□□□□ -1.37
SNHG1-208ENST00000538266 AFAP1Q8N556 730 aa6.48□□□□□ -1.37
SNHG1-208ENST00000538266 ARHGAP9Q9BRR9 750 aa6.48□□□□□ -1.37
SNHG1-208ENST00000538266 GPSM3Q9Y4H4 160 aa6.48□□□□□ -1.37
SNHG1-208ENST00000538266 ZFYVE16Q7Z3T8 1539 aa6.48□□□□□ -1.37
SNHG1-208ENST00000538266 RRBP1Q9P2E9 1410 aaKnown RBP6.48□□□□□ -1.37
SNHG1-208ENST00000538266 CROCC2H7BZ55 1655 aa6.48□□□□□ -1.37
SNHG1-208ENST00000538266 SPAG9O60271 1321 aaKnown RBP6.48□□□□□ -1.37
SNHG1-208ENST00000538266 MBD5Q9P267 1494 aa6.47□□□□□ -1.37
SNHG1-208ENST00000538266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.47□□□□□ -1.377e-33■□□□□ 8.4
SNHG1-208ENST00000538266 ATP7AQ04656 1500 aa6.47□□□□□ -1.37
SNHG1-208ENST00000538266 ARHGEF40Q8TER5 1519 aa6.47□□□□□ -1.37
SNHG1-208ENST00000538266 MAGEB6P1A0A0J9YX57 407 aa6.47□□□□□ -1.37
SNHG1-208ENST00000538266 SH3BP5LQ7L8J4 393 aa6.47□□□□□ -1.37
SNHG1-208ENST00000538266 DAPK1P53355 1430 aa6.47□□□□□ -1.37
SNHG1-208ENST00000538266 C9orf84Q5VXU9 1444 aa6.47□□□□□ -1.37
SNHG1-208ENST00000538266 INO80Q9ULG1 1556 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-208ENST00000538266 MLH3Q9UHC1 1453 aa6.47□□□□□ -1.37
SNHG1-208ENST00000538266 SHANK2Q9UPX8 1470 aa6.47□□□□□ -1.37
SNHG1-208ENST00000538266 A6NJR5 290 aa6.46□□□□□ -1.38
SNHG1-208ENST00000538266 ZBBXA8MT70 800 aa6.46□□□□□ -1.38
SNHG1-208ENST00000538266 VARSP26640 1264 aaKnown RBP6.46□□□□□ -1.38
SNHG1-208ENST00000538266 ITGAEP38570 1179 aa6.46□□□□□ -1.38
SNHG1-208ENST00000538266 IRF5Q13568 498 aa6.46□□□□□ -1.38
SNHG1-208ENST00000538266 WASHC4Q2M389 1173 aa6.46□□□□□ -1.38
SNHG1-208ENST00000538266 C4orf48Q5BLP8 95 aa6.46□□□□□ -1.38
SNHG1-208ENST00000538266 EHBP1Q8NDI1 1231 aa6.46□□□□□ -1.38
SNHG1-208ENST00000538266 CARD14Q9BXL6 1004 aa6.46□□□□□ -1.38
SNHG1-208ENST00000538266 MAST1Q9Y2H9 1570 aa6.45□□□□□ -1.38
SNHG1-208ENST00000538266 RTEL1-TNFRSF6BF6WH68 1400 aa6.45□□□□□ -1.38
SNHG1-208ENST00000538266 ABCC5O15440 1437 aa6.45□□□□□ -1.38
SNHG1-208ENST00000538266 KIDINS220Q9ULH0 1771 aa6.45□□□□□ -1.38
SNHG1-208ENST00000538266 WNT7AO00755 349 aa6.45□□□□□ -1.38
SNHG1-208ENST00000538266 GPR37L1O60883 481 aa6.45□□□□□ -1.38
SNHG1-208ENST00000538266 FBXO45P0C2W1 286 aa6.45□□□□□ -1.38
SNHG1-208ENST00000538266 VAC14Q08AM6 782 aa6.45□□□□□ -1.38
SNHG1-208ENST00000538266 NR1H3Q13133 447 aa6.45□□□□□ -1.38
SNHG1-208ENST00000538266 SH3RF1Q7Z6J0 888 aa6.45□□□□□ -1.38
SNHG1-208ENST00000538266 ADAM32Q8TC27 787 aa6.45□□□□□ -1.38
SNHG1-208ENST00000538266 OCSTAMPQ9BR26 566 aa6.45□□□□□ -1.38
SNHG1-208ENST00000538266 ZNF330Q9Y3S2 320 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-208ENST00000538266 ADGBQ8N7X0 1667 aa6.45□□□□□ -1.38
SNHG1-208ENST00000538266 ANKRD30AQ9BXX3 1397 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms