RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 GLI3P10071 1580 aa8.41□□□□□ -1.06
CHKA-204ENST00000528235 BCL9LQ86UU0 1499 aa8.41□□□□□ -1.06
CHKA-204ENST00000528235 ITGBL1O95965 494 aaPredicted RBP8.41□□□□□ -1.06
CHKA-204ENST00000528235 ZNF326Q5BKZ1 582 aaKnown RBP8.41□□□□□ -1.06
CHKA-204ENST00000528235 TSR3Q9UJK0 312 aaKnown RBP8.41□□□□□ -1.06
CHKA-204ENST00000528235 RGPD1P0DJD0 1748 aa8.4□□□□□ -1.06
CHKA-204ENST00000528235 ANKRD50Q9ULJ7 1429 aa8.4□□□□□ -1.06
CHKA-204ENST00000528235 PRSS12P56730 875 aa8.4□□□□□ -1.06
CHKA-204ENST00000528235 CDCA7LQ96GN5 454 aa8.4□□□□□ -1.06
CHKA-204ENST00000528235 ORAI2Q96SN7 254 aa8.4□□□□□ -1.06
CHKA-204ENST00000528235 WBP1LQ9NX94 342 aa8.4□□□□□ -1.06
CHKA-204ENST00000528235 TSKSQ9UJT2 592 aa8.4□□□□□ -1.06
CHKA-204ENST00000528235 HRCP23327 699 aa8.39□□□□□ -1.07
CHKA-204ENST00000528235 YY1P25490 414 aa8.39□□□□□ -1.07
CHKA-204ENST00000528235 BAG6P46379 1132 aa8.39□□□□□ -1.07
CHKA-204ENST00000528235 ADGRL2O95490 1459 aa8.38□□□□□ -1.07
CHKA-204ENST00000528235 RALGAPBQ86X10 1494 aa8.38□□□□□ -1.07
CHKA-204ENST00000528235 METP08581 1390 aa8.38□□□□□ -1.07
CHKA-204ENST00000528235 NWD2Q9ULI1 1742 aa8.38□□□□□ -1.07
CHKA-204ENST00000528235 PLCH1Q4KWH8 1693 aa8.38□□□□□ -1.07
CHKA-204ENST00000528235 UNC5CLQ8IV45 518 aa8.38□□□□□ -1.07
CHKA-204ENST00000528235 HPS5Q9UPZ3 1129 aa8.38□□□□□ -1.07
CHKA-204ENST00000528235 MYOM2P54296 1465 aa8.38□□□□□ -1.07
CHKA-204ENST00000528235 NPHP3Q7Z494 1330 aa8.37□□□□□ -1.07
CHKA-204ENST00000528235 NBPF26B4DH59 902 aa8.37□□□□□ -1.07
CHKA-204ENST00000528235 KCNC4Q03721 635 aa8.37□□□□□ -1.07
CHKA-204ENST00000528235 SEPT12Q8IYM1 358 aa8.37□□□□□ -1.07
CHKA-204ENST00000528235 CCDC9Q9Y3X0 531 aaKnown RBP8.37□□□□□ -1.07
CHKA-204ENST00000528235 RGPD8O14715 1765 aaPredicted RBP8.36□□□□□ -1.07
CHKA-204ENST00000528235 OSBPP22059 807 aa8.36□□□□□ -1.07
CHKA-204ENST00000528235 HAP1P54257 671 aaPredicted RBP8.36□□□□□ -1.07
CHKA-204ENST00000528235 PPP4CP60510 307 aa8.36□□□□□ -1.07
CHKA-204ENST00000528235 ESCO1Q5FWF5 840 aa8.36□□□□□ -1.07
CHKA-204ENST00000528235 KRT27Q7Z3Y8 459 aa8.36□□□□□ -1.07
CHKA-204ENST00000528235 FAM50AQ14320 339 aaKnown RBP8.35□□□□□ -1.07
CHKA-204ENST00000528235 RBM27Q9P2N5 1060 aaKnown RBP8.35□□□□□ -1.07
CHKA-204ENST00000528235 USP32Q8NFA0 1604 aa8.35□□□□□ -1.07
CHKA-204ENST00000528235 LRPPRCP42704 1394 aaKnown RBP8.35□□□□□ -1.07
CHKA-204ENST00000528235 SLIT2O94813 1529 aa8.34□□□□□ -1.07
CHKA-204ENST00000528235 FOXO3O43524 673 aa8.34□□□□□ -1.07
CHKA-204ENST00000528235 XPCQ01831 940 aaPredicted RBP8.34□□□□□ -1.07
CHKA-204ENST00000528235 R3HDM1Q15032 1099 aaKnown RBP8.34□□□□□ -1.07
CHKA-204ENST00000528235 TATDN2Q93075 761 aa8.34□□□□□ -1.07
CHKA-204ENST00000528235 PNMA3Q9UL41 463 aa8.34□□□□□ -1.07
CHKA-204ENST00000528235 CHD4Q14839 1912 aa8.34□□□□□ -1.07
CHKA-204ENST00000528235 PXDNQ92626 1479 aa8.33□□□□□ -1.08
CHKA-204ENST00000528235 SMAPO00193 183 aa8.33□□□□□ -1.08
CHKA-204ENST00000528235 PRIM1P49642 420 aaKnown RBP8.33□□□□□ -1.08
CHKA-204ENST00000528235 TNS1Q9HBL0 1735 aaKnown RBP8.33□□□□□ -1.08
CHKA-204ENST00000528235 KIF1AQ12756 1690 aa8.33□□□□□ -1.08
CHKA-204ENST00000528235 NEXMIFQ5QGS0 1516 aa8.33□□□□□ -1.08
CHKA-204ENST00000528235 SAMD7Q7Z3H4 446 aa8.32□□□□□ -1.08
CHKA-204ENST00000528235 IRX2Q9BZI1 471 aaPredicted RBP8.32□□□□□ -1.08
CHKA-204ENST00000528235 NUP155O75694 1391 aa8.32□□□□□ -1.08
CHKA-204ENST00000528235 ABCA3Q99758 1704 aa8.32□□□□□ -1.08
CHKA-204ENST00000528235 CDC42BPGQ6DT37 1551 aa8.31□□□□□ -1.08
CHKA-204ENST00000528235 HFM1A2PYH4 1435 aa8.31□□□□□ -1.08
CHKA-204ENST00000528235 PRKCSHP14314 528 aaPredicted RBP8.31□□□□□ -1.08
CHKA-204ENST00000528235 VPS72Q15906 364 aa8.31□□□□□ -1.08
CHKA-204ENST00000528235 ARHGEF1Q92888 912 aaKnown RBP8.31□□□□□ -1.08
CHKA-204ENST00000528235 CDHR5Q9HBB8 845 aa8.31□□□□□ -1.08
CHKA-204ENST00000528235 FAM198AQ9UFP1 575 aa8.31□□□□□ -1.08
CHKA-204ENST00000528235 ROBO2Q9HCK4 1378 aa8.31□□□□□ -1.08
CHKA-204ENST00000528235 PPLO60437 1756 aa8.3□□□□□ -1.08
CHKA-204ENST00000528235 CLTCL1P53675 1640 aa8.3□□□□□ -1.08
CHKA-204ENST00000528235 NUTM2FA1L443 756 aa8.3□□□□□ -1.08
CHKA-204ENST00000528235 NUDT18Q6ZVK8 323 aa8.3□□□□□ -1.08
CHKA-204ENST00000528235 NECTIN2Q92692 538 aa8.3□□□□□ -1.08
CHKA-204ENST00000528235 PPP1R1BQ9UD71 204 aaPredicted RBP8.3□□□□□ -1.08
CHKA-204ENST00000528235 FMN2Q9NZ56 1722 aa8.29□□□□□ -1.08
CHKA-204ENST00000528235 IFT172Q9UG01 1749 aa8.29□□□□□ -1.08
CHKA-204ENST00000528235 ADGRB2O60241 1585 aa8.29□□□□□ -1.08
CHKA-204ENST00000528235 NRAPQ86VF7 1730 aa8.29□□□□□ -1.08
CHKA-204ENST00000528235 SPATA31A3Q5VYP0 1347 aa8.29□□□□□ -1.08
CHKA-204ENST00000528235 CAMTA1Q9Y6Y1 1673 aa8.28□□□□□ -1.08
CHKA-204ENST00000528235 SLC4A3P48751 1232 aa8.28□□□□□ -1.08
CHKA-204ENST00000528235 EZH2Q15910 746 aaKnown RBP8.28□□□□□ -1.08
CHKA-204ENST00000528235 LMOD2Q6P5Q4 547 aa8.28□□□□□ -1.08
CHKA-204ENST00000528235 KRT28Q7Z3Y7 464 aa8.28□□□□□ -1.08
CHKA-204ENST00000528235 TSHZ2Q9NRE2 1034 aa8.28□□□□□ -1.08
CHKA-204ENST00000528235 CCDC144AA2RUR9 1427 aa8.28□□□□□ -1.08
CHKA-204ENST00000528235 RREB1Q92766 1687 aa8.27□□□□□ -1.08
CHKA-204ENST00000528235 NUP188Q5SRE5 1749 aa8.27□□□□□ -1.09
CHKA-204ENST00000528235 RNF40O75150 1001 aa8.27□□□□□ -1.09
CHKA-204ENST00000528235 PSME1Q06323 249 aa8.27□□□□□ -1.09
CHKA-204ENST00000528235 CABLES1Q8TDN4 633 aa8.27□□□□□ -1.09
CHKA-204ENST00000528235 COL14A1Q05707 1796 aaKnown RBP8.27□□□□□ -1.09
CHKA-204ENST00000528235 SENP3-EIF4A1A0A087X0R7 540 aa8.26□□□□□ -1.09
CHKA-204ENST00000528235 NBPF8Q3BBV2 869 aa8.26□□□□□ -1.09
CHKA-204ENST00000528235 FAM182BQ5T319 152 aa8.26□□□□□ -1.09
CHKA-204ENST00000528235 NBPF14Q5TI25 921 aa8.26□□□□□ -1.09
CHKA-204ENST00000528235 NPDC1Q9NQX5 325 aaPredicted RBP8.26□□□□□ -1.09
CHKA-204ENST00000528235 NAIPQ13075 1403 aa8.26□□□□□ -1.09
CHKA-204ENST00000528235 KNDC1Q76NI1 1749 aa8.26□□□□□ -1.09
CHKA-204ENST00000528235 C3orf80F5H4A9 247 aa8.25□□□□□ -1.09
CHKA-204ENST00000528235 PADI6Q6TGC4 694 aa8.25□□□□□ -1.09
CHKA-204ENST00000528235 TTC13Q8NBP0 860 aa8.25□□□□□ -1.09
CHKA-204ENST00000528235 TNS3Q68CZ2 1445 aa8.25□□□□□ -1.09
CHKA-204ENST00000528235 PRAG1Q86YV5 1406 aa8.25□□□□□ -1.09
CHKA-204ENST00000528235 DISP2A7MBM2 1401 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms