RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 COPS2P61201 443 aa8.3□□□□□ -1.08
CTNNA1-239ENST00000523685 CTDSPL2Q05D32 466 aa8.3□□□□□ -1.08
CTNNA1-239ENST00000523685 RNF19BQ6ZMZ0 732 aa8.3□□□□□ -1.08
CTNNA1-239ENST00000523685 USB1Q9BQ65 265 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-239ENST00000523685 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.3□□□□□ -1.08
CTNNA1-239ENST00000523685 ZNF142P52746 1687 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-239ENST00000523685 ADGBQ8N7X0 1667 aa8.3□□□□□ -1.08
CTNNA1-239ENST00000523685 CEP162Q5TB80 1403 aa8.29□□□□□ -1.08
CTNNA1-239ENST00000523685 USP17L8P0C7I0 530 aa8.29□□□□□ -1.08
CTNNA1-239ENST00000523685 TSPY4P0CV99 314 aa8.29□□□□□ -1.08
CTNNA1-239ENST00000523685 TSPY10P0CW01 314 aa8.29□□□□□ -1.08
CTNNA1-239ENST00000523685 ANKLE2Q86XL3 938 aa8.29□□□□□ -1.08
CTNNA1-239ENST00000523685 THAP11Q96EK4 314 aa8.29□□□□□ -1.08
CTNNA1-239ENST00000523685 NCOA2Q15596 1464 aa8.29□□□□□ -1.08
CTNNA1-239ENST00000523685 CCDC141Q6ZP82 1450 aa8.29□□□□□ -1.08
CTNNA1-239ENST00000523685 DNMT1P26358 1616 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-239ENST00000523685 CAMSAP2Q08AD1 1489 aa8.28□□□□□ -1.08
CTNNA1-239ENST00000523685 TOM1O60784 492 aa8.28□□□□□ -1.08
CTNNA1-239ENST00000523685 SPNS2Q8IVW8 549 aa8.28□□□□□ -1.08
CTNNA1-239ENST00000523685 THEMISQ8N1K5 641 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-239ENST00000523685 KDM5DQ9BY66 1539 aa8.28□□□□□ -1.08
CTNNA1-239ENST00000523685 PZPP20742 1482 aa8.27□□□□□ -1.09
CTNNA1-239ENST00000523685 APBB1O00213 710 aa8.27□□□□□ -1.09
CTNNA1-239ENST00000523685 RAD21O60216 631 aa8.27□□□□□ -1.09
CTNNA1-239ENST00000523685 DESI1Q6ICB0 168 aa8.27□□□□□ -1.09
CTNNA1-239ENST00000523685 MTMR14Q8NCE2 650 aa8.27□□□□□ -1.09
CTNNA1-239ENST00000523685 MIA2Q96PC5 1412 aa8.27□□□□□ -1.09
CTNNA1-239ENST00000523685 SHANK2Q9UPX8 1470 aa8.26□□□□□ -1.09
CTNNA1-239ENST00000523685 A6NJR5 290 aa8.26□□□□□ -1.09
CTNNA1-239ENST00000523685 ZPR1O75312 459 aa8.26□□□□□ -1.09
CTNNA1-239ENST00000523685 CLUAP1Q96AJ1 413 aa8.26□□□□□ -1.09
CTNNA1-239ENST00000523685 SPSB2Q99619 263 aa8.26□□□□□ -1.09
CTNNA1-239ENST00000523685 MTRQ99707 1265 aa8.26□□□□□ -1.09
CTNNA1-239ENST00000523685 FAM135AQ9P2D6 1515 aa8.25□□□□□ -1.09
CTNNA1-239ENST00000523685 TJAP1Q5JTD0 557 aa8.25□□□□□ -1.09
CTNNA1-239ENST00000523685 RNF166Q96A37 237 aaPredicted RBP8.25□□□□□ -1.09
CTNNA1-239ENST00000523685 IL21Q9HBE4 155 aa8.25□□□□□ -1.09
CTNNA1-239ENST00000523685 PRM3Q9NNZ6 103 aa8.25□□□□□ -1.09
CTNNA1-239ENST00000523685 HCSTQ9UBK5 93 aa8.25□□□□□ -1.09
CTNNA1-239ENST00000523685 NPHP4O75161 1426 aaPredicted RBP8.25□□□□□ -1.09
CTNNA1-239ENST00000523685 NEURL4Q96JN8 1562 aa8.25□□□□□ -1.09
CTNNA1-239ENST00000523685 UGGT1Q9NYU2 1555 aa8.25□□□□□ -1.09
CTNNA1-239ENST00000523685 CPS1P31327 1500 aa8.24□□□□□ -1.09
CTNNA1-239ENST00000523685 LRRN4Q8WUT4 740 aa8.24□□□□□ -1.09
CTNNA1-239ENST00000523685 POM121Q96HA1 1249 aa8.24□□□□□ -1.09
CTNNA1-239ENST00000523685 NLRP1Q9C000 1473 aa8.24□□□□□ -1.09
CTNNA1-239ENST00000523685 LOC105371045A0A1W2PR82 267 aa8.23□□□□□ -1.09
CTNNA1-239ENST00000523685 MSS51Q4VC12 460 aa8.23□□□□□ -1.09
CTNNA1-239ENST00000523685 LYPD8Q6UX82 237 aa8.23□□□□□ -1.09
CTNNA1-239ENST00000523685 FAM160A2Q8N612 972 aaPredicted RBP8.23□□□□□ -1.09
CTNNA1-239ENST00000523685 ZNF516Q92618 1163 aa8.23□□□□□ -1.09
CTNNA1-239ENST00000523685 COG6Q9Y2V7 657 aa8.23□□□□□ -1.09
CTNNA1-239ENST00000523685 POLR1AO95602 1720 aaPredicted RBP8.23□□□□□ -1.09
CTNNA1-239ENST00000523685 PER1O15534 1290 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-239ENST00000523685 ADH1BP00325 375 aa8.22□□□□□ -1.09
CTNNA1-239ENST00000523685 JUNDP17535 347 aa8.22□□□□□ -1.09
CTNNA1-239ENST00000523685 KANK4Q5T7N3 995 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-239ENST00000523685 HMX1Q9NP08 348 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-239ENST00000523685 MED1Q15648 1581 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-239ENST00000523685 VWDEQ8N2E2 1590 aa8.22□□□□□ -1.09
CTNNA1-239ENST00000523685 LRRC9Q6ZRR7 1453 aa8.21□□□□□ -1.09
CTNNA1-239ENST00000523685 ABCC3O15438 1527 aa8.21□□□□□ -1.1
CTNNA1-239ENST00000523685 GJD4Q96KN9 370 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-239ENST00000523685 GDPD2Q9HCC8 539 aa8.21□□□□□ -1.1
CTNNA1-239ENST00000523685 ARHGEF5Q12774 1597 aa8.21□□□□□ -1.1
CTNNA1-239ENST00000523685 TLL1O43897 1013 aa8.2□□□□□ -1.1
CTNNA1-239ENST00000523685 TRAK2O60296 914 aa8.2□□□□□ -1.1
CTNNA1-239ENST00000523685 TXNDC2Q86VQ3 553 aa8.2□□□□□ -1.1
CTNNA1-239ENST00000523685 RRP7BPQ9NSQ0 103 aa8.2□□□□□ -1.1
CTNNA1-239ENST00000523685 VPS8Q8N3P4 1428 aa8.2□□□□□ -1.1
CTNNA1-239ENST00000523685 MED14O60244 1454 aa8.19□□□□□ -1.1
CTNNA1-239ENST00000523685 ERVK-7P63135 1459 aa8.19□□□□□ -1.1
CTNNA1-239ENST00000523685 DXOO77932 396 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-239ENST00000523685 MMP16P51512 607 aa8.19□□□□□ -1.1
CTNNA1-239ENST00000523685 PTPRNQ16849 979 aa8.19□□□□□ -1.1
CTNNA1-239ENST00000523685 PROSER2Q86WR7 435 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-239ENST00000523685 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
CTNNA1-239ENST00000523685 TBC1D2BQ9UPU7 963 aa8.19□□□□□ -1.1
CTNNA1-239ENST00000523685 NDUFB9Q9Y6M9 179 aa8.19□□□□□ -1.1
CTNNA1-239ENST00000523685 LRRC7Q96NW7 1537 aa8.19□□□□□ -1.1
CTNNA1-239ENST00000523685 IQGAP1P46940 1657 aa8.18□□□□□ -1.1
CTNNA1-239ENST00000523685 LTKP29376 864 aa8.18□□□□□ -1.1
CTNNA1-239ENST00000523685 NR6A1Q15406 480 aa8.18□□□□□ -1.1
CTNNA1-239ENST00000523685 WWC1Q8IX03 1113 aa8.18□□□□□ -1.1
CTNNA1-239ENST00000523685 FNBP4Q8N3X1 1017 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-239ENST00000523685 EPS8L1Q8TE68 723 aa8.18□□□□□ -1.1
CTNNA1-239ENST00000523685 SLC6A16Q9GZN6 736 aa8.18□□□□□ -1.1
CTNNA1-239ENST00000523685 EID1Q9Y6B2 187 aa8.18□□□□□ -1.1
CTNNA1-239ENST00000523685 MYOM3Q5VTT5 1437 aa8.18□□□□□ -1.1
CTNNA1-239ENST00000523685 DEPDC5O75140 1603 aa8.18□□□□□ -1.1
CTNNA1-239ENST00000523685 RNF17Q9BXT8 1623 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-239ENST00000523685 ABL2P42684 1182 aa8.17□□□□□ -1.1
CTNNA1-239ENST00000523685 KCNC4Q03721 635 aa8.17□□□□□ -1.1
CTNNA1-239ENST00000523685 NKX2-3Q8TAU0 364 aa8.17□□□□□ -1.1
CTNNA1-239ENST00000523685 PRDM9Q9NQV7 894 aa8.17□□□□□ -1.1
CTNNA1-239ENST00000523685 CHIC2Q9UKJ5 165 aa8.17□□□□□ -1.1
CTNNA1-239ENST00000523685 KIF15Q9NS87 1388 aa8.17□□□□□ -1.1
CTNNA1-239ENST00000523685 SCAF11Q99590 1463 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-239ENST00000523685 ALKQ9UM73 1620 aa8.17□□□□□ -1.1
CTNNA1-239ENST00000523685 DUOX2Q9NRD8 1548 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms