RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 SMPD1P17405 629 aa10.82□□□□□ -0.68
TPR-208ENST00000492973 NR1H3Q13133 447 aa10.82□□□□□ -0.68
TPR-208ENST00000492973 ALDH1A1P00352 501 aa10.81□□□□□ -0.68
TPR-208ENST00000492973 ABL2P42684 1182 aa10.81□□□□□ -0.68
TPR-208ENST00000492973 MAP4K5Q9Y4K4 846 aa10.81□□□□□ -0.68
TPR-208ENST00000492973 CASKIN1Q8WXD9 1431 aa10.81□□□□□ -0.68
TPR-208ENST00000492973 RAPGEF6Q8TEU7 1601 aa10.8□□□□□ -0.68
TPR-208ENST00000492973 ASXL2Q76L83 1435 aa10.78□□□□□ -0.68
TPR-208ENST00000492973 FAM187AA6NFU0 413 aa10.78□□□□□ -0.68
TPR-208ENST00000492973 RAD21O60216 631 aa10.78□□□□□ -0.68
TPR-208ENST00000492973 ADH1CP00326 375 aa10.78□□□□□ -0.68
TPR-208ENST00000492973 SLC10A4Q96EP9 437 aa10.78□□□□□ -0.68
TPR-208ENST00000492973 MAPKBP1O60336 1514 aa10.78□□□□□ -0.68
TPR-208ENST00000492973 DGAT1O75907 488 aa10.77□□□□□ -0.69
TPR-208ENST00000492973 GRM5P41594 1212 aa10.77□□□□□ -0.69
TPR-208ENST00000492973 CDV3Q9UKY7 258 aaKnown RBP10.77□□□□□ -0.69
TPR-208ENST00000492973 PCF11O94913 1555 aaKnown RBP10.77□□□□□ -0.69
TPR-208ENST00000492973 VPS8Q8N3P4 1428 aa10.76□□□□□ -0.69
TPR-208ENST00000492973 FYCO1Q9BQS8 1478 aa10.76□□□□□ -0.69
TPR-208ENST00000492973 EPRSP07814 1512 aaKnown RBP10.76□□□□□ -0.69
TPR-208ENST00000492973 ARID5BQ14865 1188 aa10.76□□□□□ -0.69
TPR-208ENST00000492973 CLUAP1Q96AJ1 413 aa10.76□□□□□ -0.69
TPR-208ENST00000492973 ZCCHC11Q5TAX3 1644 aaKnown RBP10.76□□□□□ -0.69
TPR-208ENST00000492973 CDK13Q14004 1512 aaKnown RBP10.75□□□□□ -0.69
TPR-208ENST00000492973 AVPP01185 164 aa10.75□□□□□ -0.69
TPR-208ENST00000492973 VASH1Q7L8A9 365 aaPredicted RBP10.75□□□□□ -0.69
TPR-208ENST00000492973 WASF2Q9Y6W5 498 aa10.75□□□□□ -0.69
TPR-208ENST00000492973 ABCC10Q5T3U5 1492 aa10.74□□□□□ -0.69
TPR-208ENST00000492973 WASHC4Q2M389 1173 aa10.74□□□□□ -0.69
TPR-208ENST00000492973 PKDCCQ504Y2 493 aa10.74□□□□□ -0.69
TPR-208ENST00000492973 DZIP3Q86Y13 1208 aaKnown RBP10.74□□□□□ -0.69
TPR-208ENST00000492973 WDR7Q9Y4E6 1490 aa10.74□□□□□ -0.69
TPR-208ENST00000492973 HECW1Q76N89 1606 aa10.73□□□□□ -0.69
TPR-208ENST00000492973 A6NJR5 290 aa10.73□□□□□ -0.69
TPR-208ENST00000492973 VAC14Q08AM6 782 aa10.73□□□□□ -0.69
TPR-208ENST00000492973 FAM69CQ0P6D2 419 aa10.73□□□□□ -0.69
TPR-208ENST00000492973 NR5A1Q13285 461 aa10.73□□□□□ -0.69
TPR-208ENST00000492973 HPS1Q92902 700 aa10.73□□□□□ -0.69
TPR-208ENST00000492973 KCTD15Q96SI1 283 aaPredicted RBP10.73□□□□□ -0.69
TPR-208ENST00000492973 ZNF330Q9Y3S2 320 aaPredicted RBP10.73□□□□□ -0.69
TPR-208ENST00000492973 PCDHB9Q9Y5E1 797 aa10.73□□□□□ -0.69
TPR-208ENST00000492973 PLEKHD1A6NEE1 506 aa10.72□□□□□ -0.69
TPR-208ENST00000492973 NR3C2P08235 984 aa10.72□□□□□ -0.69
TPR-208ENST00000492973 FSHRP23945 695 aa10.72□□□□□ -0.69
TPR-208ENST00000492973 NNTQ13423 1086 aa10.72□□□□□ -0.69
TPR-208ENST00000492973 NBPF20Q3BBV1 942 aa10.72□□□□□ -0.69
TPR-208ENST00000492973 FNBP4Q8N3X1 1017 aaPredicted RBP10.72□□□□□ -0.69
TPR-208ENST00000492973 ESPNB1AK53 854 aa10.71□□□□□ -0.69
TPR-208ENST00000492973 MCCD1P59942 119 aaPredicted RBP10.71□□□□□ -0.69
TPR-208ENST00000492973 CCDC18Q5T9S5 1454 aa10.7□□□□□ -0.7
TPR-208ENST00000492973 LCE2BO14633 110 aa10.7□□□□□ -0.7
TPR-208ENST00000492973 MYT1Q01538 1121 aa10.7□□□□□ -0.7
TPR-208ENST00000492973 Q6ZNB5 142 aa10.7□□□□□ -0.7
TPR-208ENST00000492973 PROSER2Q86WR7 435 aaPredicted RBP10.7□□□□□ -0.7
TPR-208ENST00000492973 WWC1Q8IX03 1113 aa10.7□□□□□ -0.7
TPR-208ENST00000492973 ZNF592Q92610 1267 aa10.7□□□□□ -0.7
TPR-208ENST00000492973 DIP2BQ9P265 1576 aa10.69□□□□□ -0.7
TPR-208ENST00000492973 EIF4G2P78344 907 aaKnown RBP eCLIP10.69□□□□□ -0.7
TPR-208ENST00000492973 INTS6LQ5JSJ4 861 aaKnown RBP10.69□□□□□ -0.7
TPR-208ENST00000492973 CRIPAKQ8N1N5 446 aa10.69□□□□□ -0.7
TPR-208ENST00000492973 KLF16Q9BXK1 252 aaPredicted RBP10.69□□□□□ -0.7
TPR-208ENST00000492973 CDK11AQ9UQ88 783 aaPredicted RBP10.69□□□□□ -0.7
TPR-208ENST00000492973 TROQ12816 1431 aaPredicted RBP10.68□□□□□ -0.7
TPR-208ENST00000492973 SMCPP49901 116 aaPredicted RBP10.68□□□□□ -0.7
TPR-208ENST00000492973 MAGI3Q5TCQ9 1506 aa10.68□□□□□ -0.7
TPR-208ENST00000492973 CTC1Q2NKJ3 1217 aa10.67□□□□□ -0.7
TPR-208ENST00000492973 CCDC116Q8IYX3 515 aa10.67□□□□□ -0.7
TPR-208ENST00000492973 GLI2P10070 1586 aa10.67□□□□□ -0.7
TPR-208ENST00000492973 LRRIQ1Q96JM4 1722 aa10.67□□□□□ -0.7
TPR-208ENST00000492973 GIGYF1O75420 1035 aaPredicted RBP10.66□□□□□ -0.7
TPR-208ENST00000492973 SOX11P35716 441 aa10.66□□□□□ -0.7
TPR-208ENST00000492973 SEPT12Q8IYM1 358 aa10.66□□□□□ -0.7
TPR-208ENST00000492973 POM121CA8CG34 1229 aa10.65□□□□□ -0.7
TPR-208ENST00000492973 TIMP2P16035 220 aa10.65□□□□□ -0.7
TPR-208ENST00000492973 KANK4Q5T7N3 995 aaPredicted RBP10.65□□□□□ -0.7
TPR-208ENST00000492973 CEP126Q9P2H0 1117 aa10.65□□□□□ -0.7
TPR-208ENST00000492973 PPP1R26Q5T8A7 1209 aaPredicted RBP10.64□□□□□ -0.71
TPR-208ENST00000492973 TRAF7Q6Q0C0 670 aa10.64□□□□□ -0.71
TPR-208ENST00000492973 ALG2Q9H553 416 aa10.64□□□□□ -0.71
TPR-208ENST00000492973 AAASQ9NRG9 546 aa10.64□□□□□ -0.71
TPR-208ENST00000492973 CD109Q6YHK3 1445 aa10.64□□□□□ -0.71
TPR-208ENST00000492973 MTUS2Q5JR59 1369 aa10.64□□□□□ -0.71
TPR-208ENST00000492973 MAP3K1Q13233 1512 aa10.63□□□□□ -0.71
TPR-208ENST00000492973 ST8SIA5O15466 376 aa10.63□□□□□ -0.71
TPR-208ENST00000492973 WDR4P57081 412 aaKnown RBP10.63□□□□□ -0.71
TPR-208ENST00000492973 DHX9Q08211 1270 aaKnown RBP10.63□□□□□ -0.71
TPR-208ENST00000492973 ITPKCQ96DU7 683 aa10.63□□□□□ -0.71
TPR-208ENST00000492973 EMILIN1Q9Y6C2 1016 aa10.63□□□□□ -0.71
TPR-208ENST00000492973 TIAM1Q13009 1591 aa10.63□□□□□ -0.71
TPR-208ENST00000492973 AXIN1O15169 862 aa10.62□□□□□ -0.71
TPR-208ENST00000492973 ADAMTS19Q8TE59 1207 aa10.62□□□□□ -0.71
TPR-208ENST00000492973 KIF13AQ9H1H9 1805 aa10.62□□□□□ -0.71
TPR-208ENST00000492973 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.62□□□□□ -0.71
TPR-208ENST00000492973 LRRC9Q6ZRR7 1453 aa10.61□□□□□ -0.71
TPR-208ENST00000492973 ERVH48-1M5A8F1 160 aa10.61□□□□□ -0.71
TPR-208ENST00000492973 CAPN5O15484 640 aaPredicted RBP10.61□□□□□ -0.71
TPR-208ENST00000492973 ZIC2O95409 532 aaPredicted RBP10.61□□□□□ -0.71
TPR-208ENST00000492973 RAB15P59190 212 aa10.61□□□□□ -0.71
TPR-208ENST00000492973 SEMA3FQ13275 785 aa10.61□□□□□ -0.71
TPR-208ENST00000492973 RNF20Q5VTR2 975 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms