RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 KIF1AQ12756 1690 aa23.17■■□□□ 1.3
POLR2J3-205ENST00000489144 IGSF1Q8N6C5 1336 aa23.17■■□□□ 1.3
POLR2J3-205ENST00000489144 KCNH5Q8NCM2 988 aa23.17■■□□□ 1.3
POLR2J3-205ENST00000489144 NAP1L5Q96NT1 182 aaPredicted RBP23.17■■□□□ 1.3
POLR2J3-205ENST00000489144 CHRNA2Q15822 529 aa23.16■■□□□ 1.3
POLR2J3-205ENST00000489144 NPM2Q86SE8 214 aaKnown RBP23.16■■□□□ 1.3
POLR2J3-205ENST00000489144 ARHGEF10O15013 1369 aa23.16■■□□□ 1.3
POLR2J3-205ENST00000489144 MIS18AQ9NYP9 233 aa23.16■■□□□ 1.3
POLR2J3-205ENST00000489144 NPHP3Q7Z494 1330 aa23.16■■□□□ 1.3
POLR2J3-205ENST00000489144 PANK1Q8TE04 598 aa23.15■■□□□ 1.3
POLR2J3-205ENST00000489144 USP54Q70EL1 1684 aa23.15■■□□□ 1.3
POLR2J3-205ENST00000489144 ARHGEF25Q86VW2 580 aa23.15■■□□□ 1.3
POLR2J3-205ENST00000489144 CLUAP1Q96AJ1 413 aa23.15■■□□□ 1.3
POLR2J3-205ENST00000489144 PRDM4Q9UKN5 801 aa23.14■■□□□ 1.29
POLR2J3-205ENST00000489144 RGPD2P0DJD1 1756 aa23.14■■□□□ 1.29
POLR2J3-205ENST00000489144 MED1Q15648 1581 aaPredicted RBP23.14■■□□□ 1.29
POLR2J3-205ENST00000489144 TSPYL6Q8N831 410 aa23.13■■□□□ 1.29
POLR2J3-205ENST00000489144 MBIPQ9NS73 344 aa23.13■■□□□ 1.29
POLR2J3-205ENST00000489144 NCOA3Q9Y6Q9 1424 aa23.13■■□□□ 1.29
POLR2J3-205ENST00000489144 KRT24Q2M2I5 525 aa23.13■■□□□ 1.29
POLR2J3-205ENST00000489144 CALD1Q05682 793 aaKnown RBP23.12■■□□□ 1.29
POLR2J3-205ENST00000489144 USP19O94966 1318 aa23.12■■□□□ 1.29
POLR2J3-205ENST00000489144 ALS2Q96Q42 1657 aa23.1■■□□□ 1.29
POLR2J3-205ENST00000489144 ANKRD24Q8TF21 1146 aa23.1■■□□□ 1.29
POLR2J3-205ENST00000489144 SMC4Q9NTJ3 1288 aa23.1■■□□□ 1.29
POLR2J3-205ENST00000489144 PXDNQ92626 1479 aa23.1■■□□□ 1.29
POLR2J3-205ENST00000489144 KDRP35968 1356 aa23.09■■□□□ 1.29
POLR2J3-205ENST00000489144 SSH1Q8WYL5 1049 aa23.09■■□□□ 1.29
POLR2J3-205ENST00000489144 COG6Q9Y2V7 657 aa23.09■■□□□ 1.29
POLR2J3-205ENST00000489144 SLIT3O75094 1523 aa23.09■■□□□ 1.29
POLR2J3-205ENST00000489144 NCBP3Q53F19 620 aaKnown RBP23.09■■□□□ 1.29
POLR2J3-205ENST00000489144 SKAP1Q86WV1 359 aa23.09■■□□□ 1.29
POLR2J3-205ENST00000489144 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.09■■□□□ 1.29
POLR2J3-205ENST00000489144 IL16Q14005 1332 aa23.08■■□□□ 1.29
POLR2J3-205ENST00000489144 RLBP1P12271 317 aa23.08■■□□□ 1.29
POLR2J3-205ENST00000489144 SPATA31A3Q5VYP0 1347 aa23.08■■□□□ 1.29
POLR2J3-205ENST00000489144 RGPD5Q99666 1765 aa23.08■■□□□ 1.29
POLR2J3-205ENST00000489144 TNS3Q68CZ2 1445 aa23.08■■□□□ 1.28
POLR2J3-205ENST00000489144 RTL1A6NKG5 1358 aa23.08■■□□□ 1.28
POLR2J3-205ENST00000489144 C8orf58Q8NAV2 365 aa23.06■■□□□ 1.28
POLR2J3-205ENST00000489144 LMOD3Q0VAK6 560 aa23.06■■□□□ 1.28
POLR2J3-205ENST00000489144 GNAI1P63096 354 aa23.05■■□□□ 1.28
POLR2J3-205ENST00000489144 TAF7LQ5H9L4 462 aa23.05■■□□□ 1.28
POLR2J3-205ENST00000489144 IFT57Q9NWB7 429 aa23.05■■□□□ 1.28
POLR2J3-205ENST00000489144 KIF24Q5T7B8 1368 aa23.05■■□□□ 1.28
POLR2J3-205ENST00000489144 RTF1Q92541 710 aaKnown RBP23.04■■□□□ 1.28
POLR2J3-205ENST00000489144 CFAP44Q96MT7 982 aa23.04■■□□□ 1.28
POLR2J3-205ENST00000489144 ZNF853P0CG23 659 aa23.03■■□□□ 1.28
POLR2J3-205ENST00000489144 KIAA0232Q92628 1395 aa23.03■■□□□ 1.28
POLR2J3-205ENST00000489144 HAP1P54257 671 aaPredicted RBP23.02■■□□□ 1.28
POLR2J3-205ENST00000489144 NLRP2Q9NX02 1062 aa23.02■■□□□ 1.28
POLR2J3-205ENST00000489144 DDRGK1Q96HY6 314 aa23.02■■□□□ 1.28
POLR2J3-205ENST00000489144 CSB-PGBD3P0DP91 1061 aa23.01■■□□□ 1.27
POLR2J3-205ENST00000489144 NOB1Q9ULX3 412 aaKnown RBP23.01■■□□□ 1.27
POLR2J3-205ENST00000489144 GAS2L2Q8NHY3 880 aa23■■□□□ 1.27
POLR2J3-205ENST00000489144 TWISTNBQ3B726 338 aaPredicted RBP22.99■■□□□ 1.27
POLR2J3-205ENST00000489144 ERBB3P21860 1342 aa22.99■■□□□ 1.27
POLR2J3-205ENST00000489144 PHRF1Q9P1Y6 1649 aaKnown RBP22.99■■□□□ 1.27
POLR2J3-205ENST00000489144 VAMP4O75379 141 aa22.99■■□□□ 1.27
POLR2J3-205ENST00000489144 IL17REQ8NFR9 667 aa22.98■■□□□ 1.27
POLR2J3-205ENST00000489144 PDCL3Q9H2J4 239 aa22.98■■□□□ 1.27
POLR2J3-205ENST00000489144 GNAT3A8MTJ3 354 aa22.98■■□□□ 1.27
POLR2J3-205ENST00000489144 CLCN1P35523 988 aa22.98■■□□□ 1.27
POLR2J3-205ENST00000489144 SOS2Q07890 1332 aaPredicted RBP22.97■■□□□ 1.27
POLR2J3-205ENST00000489144 LGR6Q9HBX8 967 aa22.97■■□□□ 1.27
POLR2J3-205ENST00000489144 CRB1P82279 1406 aa22.97■■□□□ 1.27
POLR2J3-205ENST00000489144 RGS3P49796 1198 aa22.97■■□□□ 1.27
POLR2J3-205ENST00000489144 TRIM27P14373 513 aa22.96■■□□□ 1.27
POLR2J3-205ENST00000489144 PDE4AP27815 886 aa22.96■■□□□ 1.27
POLR2J3-205ENST00000489144 TSPYL4Q9UJ04 414 aa22.96■■□□□ 1.27
POLR2J3-205ENST00000489144 MPRIPQ6WCQ1 1025 aa22.96■■□□□ 1.27
POLR2J3-205ENST00000489144 ZNF530Q6P9A1 599 aaPredicted RBP22.96■■□□□ 1.27
POLR2J3-205ENST00000489144 FTSJ3Q8IY81 847 aaKnown RBP22.95■■□□□ 1.26
POLR2J3-205ENST00000489144 NECTIN2Q92692 538 aa22.95■■□□□ 1.26
POLR2J3-205ENST00000489144 PRDM11Q9NQV5 511 aa22.95■■□□□ 1.26
POLR2J3-205ENST00000489144 CHL1O00533 1208 aa22.95■■□□□ 1.26
POLR2J3-205ENST00000489144 ZKSCAN2Q63HK3 967 aa22.95■■□□□ 1.26
POLR2J3-205ENST00000489144 MAP3K5Q99683 1374 aa22.94■■□□□ 1.26
POLR2J3-205ENST00000489144 BACH2Q9BYV9 841 aa22.94■■□□□ 1.26
POLR2J3-205ENST00000489144 PIP4K2BP78356 416 aa22.93■■□□□ 1.26
POLR2J3-205ENST00000489144 PDE3AQ14432 1141 aa22.92■■□□□ 1.26
POLR2J3-205ENST00000489144 AEBP2Q6ZN18 517 aaPredicted RBP22.92■■□□□ 1.26
POLR2J3-205ENST00000489144 CT47B1P0C2W7 299 aaPredicted RBP22.91■■□□□ 1.26
POLR2J3-205ENST00000489144 ITPRIPQ8IWB1 547 aa22.91■■□□□ 1.26
POLR2J3-205ENST00000489144 DZIP1LQ8IYY4 767 aaKnown RBP22.91■■□□□ 1.26
POLR2J3-205ENST00000489144 STRN4Q9NRL3 753 aa22.91■■□□□ 1.26
POLR2J3-205ENST00000489144 CRYBG1Q9Y4K1 1723 aa22.9■■□□□ 1.26
POLR2J3-205ENST00000489144 ATF7IPQ6VMQ6 1270 aa22.9■■□□□ 1.26
POLR2J3-205ENST00000489144 MRPL50Q8N5N7 158 aaKnown RBP22.89■■□□□ 1.25
POLR2J3-205ENST00000489144 TMEM57Q8N5G2 664 aa22.89■■□□□ 1.25
POLR2J3-205ENST00000489144 COL18A1P39060 1754 aa22.88■■□□□ 1.25
POLR2J3-205ENST00000489144 KCNQ3O43525 872 aa22.87■■□□□ 1.25
POLR2J3-205ENST00000489144 PLEKHO1Q53GL0 409 aaPredicted RBP22.87■■□□□ 1.25
POLR2J3-205ENST00000489144 IGHDP01880 384 aa22.87■■□□□ 1.25
POLR2J3-205ENST00000489144 ROBO1Q9Y6N7 1651 aa22.86■■□□□ 1.25
POLR2J3-205ENST00000489144 MS4A1P11836 297 aa22.86■■□□□ 1.25
POLR2J3-205ENST00000489144 L1TD1Q5T7N2 865 aaKnown RBP22.86■■□□□ 1.25
POLR2J3-205ENST00000489144 RAPGEF4Q8WZA2 1011 aa22.86■■□□□ 1.25
POLR2J3-205ENST00000489144 LTBP4Q8N2S1 1624 aa22.86■■□□□ 1.25
POLR2J3-205ENST00000489144 MEGF6O75095 1541 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms