RNA–Protein interactions for RNA: ENST00000483564.5

GABRE-208, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, human

TSL 3

Gene GABRE, Length 2,747 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRE-208	ENST00000483564	RAPGEF3	O95398	923 aa		11.2	□□□□□ -0.62
GABRE-208	ENST00000483564	PLEKHM2	Q8IWE5	1019 aa		11.2	□□□□□ -0.62
GABRE-208	ENST00000483564	KCNG1	Q9UIX4	513 aa		11.2	□□□□□ -0.62
GABRE-208	ENST00000483564	MROH1	Q8NDA8	1641 aa		11.2	□□□□□ -0.62
GABRE-208	ENST00000483564	ELL2	O00472	640 aa	Predicted RBP	11.2	□□□□□ -0.62
GABRE-208	ENST00000483564	SMARCA5	O60264	1052 aa	Predicted RBP	11.2	□□□□□ -0.62
GABRE-208	ENST00000483564	SLFN14	P0C7P3	912 aa		11.2	□□□□□ -0.62
GABRE-208	ENST00000483564	IQGAP1	P46940	1657 aa		11.19	□□□□□ -0.62
GABRE-208	ENST00000483564	SHPRH	Q149N8	1683 aa		11.19	□□□□□ -0.62
GABRE-208	ENST00000483564	DIP2C	Q9Y2E4	1556 aa		11.19	□□□□□ -0.62
GABRE-208	ENST00000483564	RIOK3	O14730	519 aa	Known RBP	11.19	□□□□□ -0.62
GABRE-208	ENST00000483564	ADCY5	O95622	1261 aa		11.19	□□□□□ -0.62
GABRE-208	ENST00000483564	PLCB2	Q00722	1185 aa		11.19	□□□□□ -0.62
GABRE-208	ENST00000483564	NOL8	Q76FK4	1167 aa	Known RBP	11.19	□□□□□ -0.62
GABRE-208	ENST00000483564	HDAC5	Q9UQL6	1122 aa		11.19	□□□□□ -0.62
GABRE-208	ENST00000483564	LMTK2	Q8IWU2	1503 aa		11.19	□□□□□ -0.62
GABRE-208	ENST00000483564	FRMPD1	Q5SYB0	1578 aa		11.19	□□□□□ -0.62
GABRE-208	ENST00000483564	MYCN	P04198	464 aa	Predicted RBP	11.19	□□□□□ -0.62
GABRE-208	ENST00000483564	FKBP5	Q13451	457 aa	Predicted RBP	11.19	□□□□□ -0.62
GABRE-208	ENST00000483564	PLEKHF1	Q96S99	279 aa		11.19	□□□□□ -0.62
GABRE-208	ENST00000483564	MADD	Q8WXG6	1647 aa		11.19	□□□□□ -0.62
GABRE-208	ENST00000483564	SOX12	O15370	315 aa		11.18	□□□□□ -0.62
GABRE-208	ENST00000483564	MLEC	Q14165	292 aa		11.18	□□□□□ -0.62
GABRE-208	ENST00000483564	TRAK1	Q9UPV9	953 aa		11.18	□□□□□ -0.62
GABRE-208	ENST00000483564	APBB1	O00213	710 aa		11.18	□□□□□ -0.62
GABRE-208	ENST00000483564	APP	P05067	770 aa		11.18	□□□□□ -0.62
GABRE-208	ENST00000483564	SPHKAP	Q2M3C7	1700 aa		11.18	□□□□□ -0.62
GABRE-208	ENST00000483564	ST18	O60284	1047 aa		11.17	□□□□□ -0.62
GABRE-208	ENST00000483564	OGFR	Q9NZT2	677 aa		11.17	□□□□□ -0.62
GABRE-208	ENST00000483564	TRPM2	O94759	1503 aa		11.17	□□□□□ -0.62
GABRE-208	ENST00000483564	PTPRT	O14522	1441 aa		11.17	□□□□□ -0.62
GABRE-208	ENST00000483564	MBD3	O95983	291 aa		11.17	□□□□□ -0.62
GABRE-208	ENST00000483564	PYCARD	Q9ULZ3	195 aa		11.17	□□□□□ -0.62
GABRE-208	ENST00000483564	HCLS1	P14317	486 aa	Predicted RBP	11.16	□□□□□ -0.62
GABRE-208	ENST00000483564	FEZ1	Q99689	392 aa		11.16	□□□□□ -0.62
GABRE-208	ENST00000483564	GABPB1	Q06547	395 aa	Predicted RBP	11.16	□□□□□ -0.62
GABRE-208	ENST00000483564	TTC22	Q5TAA0	569 aa		11.16	□□□□□ -0.62
GABRE-208	ENST00000483564	CNPY4	Q8N129	248 aa		11.16	□□□□□ -0.62
GABRE-208	ENST00000483564	TSPYL6	Q8N831	410 aa		11.16	□□□□□ -0.62
GABRE-208	ENST00000483564	TMX3	Q96JJ7	454 aa		11.16	□□□□□ -0.62
GABRE-208	ENST00000483564	SPTLC3	Q9NUV7	552 aa		11.16	□□□□□ -0.62
GABRE-208	ENST00000483564	SDS	P20132	328 aa		11.15	□□□□□ -0.62
GABRE-208	ENST00000483564	NEK4	P51957	841 aa		11.15	□□□□□ -0.62
GABRE-208	ENST00000483564	NAA30	Q147X3	362 aa	Predicted RBP	11.15	□□□□□ -0.62
GABRE-208	ENST00000483564	EFCAB6	Q5THR3	1501 aa		11.15	□□□□□ -0.62
GABRE-208	ENST00000483564	AP5Z1	O43299	807 aa		11.15	□□□□□ -0.62
GABRE-208	ENST00000483564	BRD1	O95696	1058 aa		11.15	□□□□□ -0.62
GABRE-208	ENST00000483564	ANKRD7	Q92527	254 aa		11.15	□□□□□ -0.62
GABRE-208	ENST00000483564	THUMPD2	Q9BTF0	503 aa	Known RBP	11.15	□□□□□ -0.62
GABRE-208	ENST00000483564	KDM5A	P29375	1690 aa	Known RBP	11.15	□□□□□ -0.62
GABRE-208	ENST00000483564	RERE	Q9P2R6	1566 aa		11.15	□□□□□ -0.62
GABRE-208	ENST00000483564	CEP152	O94986	1710 aa		11.15	□□□□□ -0.63
GABRE-208	ENST00000483564	TULP2	O00295	520 aa		11.15	□□□□□ -0.63
GABRE-208	ENST00000483564	USP48	Q86UV5	1035 aa		11.15	□□□□□ -0.63
GABRE-208	ENST00000483564	KCNF1	Q9H3M0	494 aa		11.15	□□□□□ -0.63
GABRE-208	ENST00000483564	TNNT3	P45378	269 aa	Predicted RBP	11.14	□□□□□ -0.63
GABRE-208	ENST00000483564	TERF2	Q15554	542 aa		11.14	□□□□□ -0.63
GABRE-208	ENST00000483564	INTS3	Q68E01	1043 aa	Known RBP	11.14	□□□□□ -0.63
GABRE-208	ENST00000483564	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.14	□□□□□ -0.63
GABRE-208	ENST00000483564	SPC24	Q8NBT2	197 aa		11.14	□□□□□ -0.63
GABRE-208	ENST00000483564	NEURL4	Q96JN8	1562 aa		11.14	□□□□□ -0.63
GABRE-208	ENST00000483564	ZC3H13	Q5T200	1668 aa	Known RBP	11.14	□□□□□ -0.63
GABRE-208	ENST00000483564	LOC102724159	A0A0B4J2E5	919 aa		11.14	□□□□□ -0.63
GABRE-208	ENST00000483564	PRR29	P0C7W0	189 aa		11.14	□□□□□ -0.63
GABRE-208	ENST00000483564	PWP2	Q15269	919 aa	Known RBP	11.14	□□□□□ -0.63
GABRE-208	ENST00000483564	TMX1	Q9H3N1	280 aa		11.14	□□□□□ -0.63
GABRE-208	ENST00000483564	ABCC11	Q96J66	1382 aa		11.13	□□□□□ -0.63
GABRE-208	ENST00000483564	NCBP3	Q53F19	620 aa	Known RBP	11.13	□□□□□ -0.63
GABRE-208	ENST00000483564	TMEM132E	Q6IEE7	984 aa		11.13	□□□□□ -0.63
GABRE-208	ENST00000483564	KIAA1524	Q8TCG1	905 aa		11.13	□□□□□ -0.63
GABRE-208	ENST00000483564	HAP1	P54257	671 aa	Predicted RBP	11.13	□□□□□ -0.63
GABRE-208	ENST00000483564	ALDH1L2	Q3SY69	923 aa		11.13	□□□□□ -0.63
GABRE-208	ENST00000483564	MRPL50	Q8N5N7	158 aa	Known RBP	11.13	□□□□□ -0.63
GABRE-208	ENST00000483564	CALCOCO1	Q9P1Z2	691 aa		11.13	□□□□□ -0.63
GABRE-208	ENST00000483564	YEATS2	Q9ULM3	1422 aa		11.12	□□□□□ -0.63
GABRE-208	ENST00000483564	GGNBP2	Q9H3C7	697 aa		11.12	□□□□□ -0.63
GABRE-208	ENST00000483564	DTNB	O60941	627 aa		11.12	□□□□□ -0.63
GABRE-208	ENST00000483564	VAMP4	O75379	141 aa		11.12	□□□□□ -0.63
GABRE-208	ENST00000483564	PSEN1	P49768	467 aa		11.12	□□□□□ -0.63
GABRE-208	ENST00000483564	NCBP1	Q09161	790 aa	Known RBP	11.12	□□□□□ -0.63
GABRE-208	ENST00000483564	KDM4A	O75164	1064 aa		11.11	□□□□□ -0.63
GABRE-208	ENST00000483564	GGT6	Q6P531	493 aa		11.11	□□□□□ -0.63
GABRE-208	ENST00000483564	EP400NL	Q6ZTU2	488 aa		11.11	□□□□□ -0.63
GABRE-208	ENST00000483564	SYAP1	Q96A49	352 aa	Predicted RBP	11.11	□□□□□ -0.63
GABRE-208	ENST00000483564	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.11	□□□□□ -0.63
GABRE-208	ENST00000483564	CTNNA3	Q9UI47	895 aa		11.11	□□□□□ -0.63
GABRE-208	ENST00000483564	ABCC3	O15438	1527 aa		11.11	□□□□□ -0.63
GABRE-208	ENST00000483564	AGL	P35573	1532 aa		11.11	□□□□□ -0.63
GABRE-208	ENST00000483564	CTIF	O43310	598 aa	Known RBP	11.11	□□□□□ -0.63
GABRE-208	ENST00000483564	CHAF1A	Q13111	956 aa	Predicted RBP	11.11	□□□□□ -0.63
GABRE-208	ENST00000483564	DCTPP1	Q9H773	170 aa		11.11	□□□□□ -0.63
GABRE-208	ENST00000483564	CLTCL1	P53675	1640 aa		11.11	□□□□□ -0.63
GABRE-208	ENST00000483564	MMP14	P50281	582 aa		11.1	□□□□□ -0.63
GABRE-208	ENST00000483564	UVSSA	Q2YD98	709 aa		11.1	□□□□□ -0.63
GABRE-208	ENST00000483564	DIAPH3	Q9NSV4	1193 aa		11.1	□□□□□ -0.63
GABRE-208	ENST00000483564	PALD1	Q9ULE6	856 aa		11.1	□□□□□ -0.63
GABRE-208	ENST00000483564	CAMSAP1	Q5T5Y3	1602 aa		11.1	□□□□□ -0.63
GABRE-208	ENST00000483564	GIMAP6	Q6P9H5	292 aa		11.1	□□□□□ -0.63
GABRE-208	ENST00000483564	PPP6R1	Q9UPN7	881 aa		11.1	□□□□□ -0.63
GABRE-208	ENST00000483564	FBLN1	P23142	703 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms