RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 Q3C1V9 767 aa10.76□□□□□ -0.69
USP33-208ENST00000477949 RNF19BQ6ZMZ0 732 aa10.76□□□□□ -0.69
USP33-208ENST00000477949 AAASQ9NRG9 546 aa10.76□□□□□ -0.69
USP33-208ENST00000477949 PHLPP1O60346 1717 aa10.75□□□□□ -0.69
USP33-208ENST00000477949 LRRC9Q6ZRR7 1453 aa10.75□□□□□ -0.69
USP33-208ENST00000477949 IRF6O14896 467 aa10.75□□□□□ -0.69
USP33-208ENST00000477949 CD46P15529 392 aa10.75□□□□□ -0.69
USP33-208ENST00000477949 LTKP29376 864 aa10.75□□□□□ -0.69
USP33-208ENST00000477949 CYP4X1Q8N118 509 aa10.75□□□□□ -0.69
USP33-208ENST00000477949 PRDM9Q9NQV7 894 aa10.75□□□□□ -0.69
USP33-208ENST00000477949 TOR4AQ9NXH8 423 aa10.75□□□□□ -0.69
USP33-208ENST00000477949 TMEM94Q12767 1356 aa10.75□□□□□ -0.69
USP33-208ENST00000477949 JCADQ9P266 1359 aa10.75□□□□□ -0.69
USP33-208ENST00000477949 CDK12Q9NYV4 1490 aaPredicted RBP10.74□□□□□ -0.69
USP33-208ENST00000477949 ABCC3O15438 1527 aa10.74□□□□□ -0.69
USP33-208ENST00000477949 ZNF644Q9H582 1327 aaPredicted RBP10.74□□□□□ -0.69
USP33-208ENST00000477949 FYCO1Q9BQS8 1478 aa10.74□□□□□ -0.69
USP33-208ENST00000477949 TIAM1Q13009 1591 aa10.73□□□□□ -0.69
USP33-208ENST00000477949 KIF3BO15066 747 aa10.73□□□□□ -0.69
USP33-208ENST00000477949 ST8SIA5O15466 376 aa10.73□□□□□ -0.69
USP33-208ENST00000477949 CFDP1Q9UEE9 299 aaPredicted RBP10.73□□□□□ -0.69
USP33-208ENST00000477949 CAMSAP2Q08AD1 1489 aa10.73□□□□□ -0.69
USP33-208ENST00000477949 MROH1Q8NDA8 1641 aa10.73□□□□□ -0.69
USP33-208ENST00000477949 KDM4AO75164 1064 aa10.72□□□□□ -0.69
USP33-208ENST00000477949 MINK1Q8N4C8 1332 aaPredicted RBP10.72□□□□□ -0.69
USP33-208ENST00000477949 WASHC2CQ9Y4E1 1318 aa10.72□□□□□ -0.69
USP33-208ENST00000477949 NWD1Q149M9 1564 aa10.72□□□□□ -0.69
USP33-208ENST00000477949 AVPP01185 164 aa10.71□□□□□ -0.69
USP33-208ENST00000477949 MMP16P51512 607 aa10.71□□□□□ -0.69
USP33-208ENST00000477949 PRDM15P57071 1507 aaPredicted RBP10.71□□□□□ -0.69
USP33-208ENST00000477949 CRIPAKQ8N1N5 446 aa10.71□□□□□ -0.69
USP33-208ENST00000477949 TRIM52Q96A61 297 aa10.71□□□□□ -0.69
USP33-208ENST00000477949 FGD6Q6ZV73 1430 aa10.7□□□□□ -0.7
USP33-208ENST00000477949 CCNB3Q8WWL7 1395 aa10.7□□□□□ -0.7
USP33-208ENST00000477949 USP46P62068 366 aa10.7□□□□□ -0.7
USP33-208ENST00000477949 VSIG10Q8N0Z9 540 aa10.7□□□□□ -0.7
USP33-208ENST00000477949 USB1Q9BQ65 265 aaKnown RBP10.7□□□□□ -0.7
USP33-208ENST00000477949 TET3O43151 1660 aa10.69□□□□□ -0.7
USP33-208ENST00000477949 SHPRHQ149N8 1683 aa10.69□□□□□ -0.7
USP33-208ENST00000477949 MDM2Q00987 491 aaPredicted RBP10.69□□□□□ -0.7
USP33-208ENST00000477949 NKTRP30414 1462 aaKnown RBP10.68□□□□□ -0.7
USP33-208ENST00000477949 CCDC141Q6ZP82 1450 aa10.68□□□□□ -0.7
USP33-208ENST00000477949 TTC24A2A3L6 582 aaPredicted RBP10.68□□□□□ -0.7
USP33-208ENST00000477949 ZNF772Q68DY9 489 aaPredicted RBP10.68□□□□□ -0.7
USP33-208ENST00000477949 RGS12O14924 1447 aa10.67□□□□□ -0.7
USP33-208ENST00000477949 SPATA31A6Q5VVP1 1343 aa10.67□□□□□ -0.7
USP33-208ENST00000477949 AHDC1Q5TGY3 1603 aaPredicted RBP10.67□□□□□ -0.7
USP33-208ENST00000477949 AXIN1O15169 862 aa10.67□□□□□ -0.7
USP33-208ENST00000477949 UBTFP17480 764 aaKnown RBP10.67□□□□□ -0.7
USP33-208ENST00000477949 CTC1Q2NKJ3 1217 aa10.67□□□□□ -0.7
USP33-208ENST00000477949 DIP2AQ14689 1571 aa10.67□□□□□ -0.7
USP33-208ENST00000477949 SETBP1Q9Y6X0 1596 aa10.67□□□□□ -0.7
USP33-208ENST00000477949 WNT7AO00755 349 aa10.66□□□□□ -0.7
USP33-208ENST00000477949 KCNA6P17658 529 aa10.66□□□□□ -0.7
USP33-208ENST00000477949 TXNDC2Q86VQ3 553 aa10.66□□□□□ -0.7
USP33-208ENST00000477949 CEP152O94986 1710 aa10.66□□□□□ -0.7
USP33-208ENST00000477949 KDM5AP29375 1690 aaKnown RBP10.66□□□□□ -0.7
USP33-208ENST00000477949 PIK3C2BO00750 1634 aa10.66□□□□□ -0.7
USP33-208ENST00000477949 DXOO77932 396 aaKnown RBP10.65□□□□□ -0.7
USP33-208ENST00000477949 SMCPP49901 116 aaPredicted RBP10.65□□□□□ -0.7
USP33-208ENST00000477949 TRIM32Q13049 653 aa10.65□□□□□ -0.7
USP33-208ENST00000477949 DACH1Q9UI36 760 aa10.65□□□□□ -0.7
USP33-208ENST00000477949 TMEM2Q9UHN6 1383 aa10.65□□□□□ -0.71
USP33-208ENST00000477949 RXRBP28702 533 aa10.64□□□□□ -0.71
USP33-208ENST00000477949 SNIP1Q8TAD8 396 aaKnown RBP10.64□□□□□ -0.71
USP33-208ENST00000477949 SLAIN2Q9P270 581 aa10.64□□□□□ -0.71
USP33-208ENST00000477949 EIF2AK4Q9P2K8 1649 aaKnown RBP10.64□□□□□ -0.71
USP33-208ENST00000477949 CFAP65Q6ZU64 1925 aaKnown RBP10.64□□□□□ -0.71
USP33-208ENST00000477949 ARHGEF5Q12774 1597 aa10.63□□□□□ -0.71
USP33-208ENST00000477949 ARHGAP31Q2M1Z3 1444 aa10.62□□□□□ -0.71
USP33-208ENST00000477949 HOXA2O43364 376 aa10.62□□□□□ -0.71
USP33-208ENST00000477949 CLCN1P35523 988 aa10.62□□□□□ -0.71
USP33-208ENST00000477949 CCDC102AQ96A19 550 aa10.62□□□□□ -0.71
USP33-208ENST00000477949 GPCPD1Q9NPB8 672 aa10.62□□□□□ -0.71
USP33-208ENST00000477949 MSH6P52701 1360 aa10.62□□□□□ -0.71
USP33-208ENST00000477949 MAST1Q9Y2H9 1570 aa10.61□□□□□ -0.71
USP33-208ENST00000477949 CEP162Q5TB80 1403 aa10.61□□□□□ -0.71
USP33-208ENST00000477949 TREML4Q6UXN2 200 aa10.61□□□□□ -0.71
USP33-208ENST00000477949 PROSER2Q86WR7 435 aaPredicted RBP10.61□□□□□ -0.71
USP33-208ENST00000477949 CCDC24Q8N4L8 307 aa10.61□□□□□ -0.71
USP33-208ENST00000477949 HLA-CQ95604 372 aa10.61□□□□□ -0.71
USP33-208ENST00000477949 EHBP1L1Q8N3D4 1523 aa10.6□□□□□ -0.71
USP33-208ENST00000477949 SMPD1P17405 629 aa10.6□□□□□ -0.71
USP33-208ENST00000477949 KRI1Q8N9T8 703 aaKnown RBP10.6□□□□□ -0.71
USP33-208ENST00000477949 MRGPRX2Q96LB1 330 aa10.6□□□□□ -0.71
USP33-208ENST00000477949 FAM217BQ9NTX9 383 aaPredicted RBP10.6□□□□□ -0.71
USP33-208ENST00000477949 GMPR2Q9P2T1 348 aaKnown RBP10.6□□□□□ -0.71
USP33-208ENST00000477949 CEP350Q5VT06 3117 aa10.6□□□□□ -0.71
USP33-208ENST00000477949 MTUS2Q5JR59 1369 aa10.6□□□□□ -0.71
USP33-208ENST00000477949 EFCAB6Q5THR3 1501 aa10.59□□□□□ -0.71
USP33-208ENST00000477949 CHD2O14647 1828 aaKnown RBP10.59□□□□□ -0.71
USP33-208ENST00000477949 C11orf95C9JLR9 678 aaPredicted RBP10.59□□□□□ -0.71
USP33-208ENST00000477949 MEX3CQ5U5Q3 659 aaKnown RBP10.59□□□□□ -0.71
USP33-208ENST00000477949 NUTM1Q86Y26 1132 aa10.59□□□□□ -0.71
USP33-208ENST00000477949 AFF2P51816 1311 aa10.58□□□□□ -0.71
USP33-208ENST00000477949 SLC26A8Q96RN1 970 aa10.58□□□□□ -0.72
USP33-208ENST00000477949 REPIN1Q9BWE0 567 aaKnown RBP10.58□□□□□ -0.72
USP33-208ENST00000477949 EID1Q9Y6B2 187 aa10.58□□□□□ -0.72
USP33-208ENST00000477949 EP400Q96L91 3159 aa10.57□□□□□ -0.72
USP33-208ENST00000477949 NCOA3Q9Y6Q9 1424 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms