RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 MBD3O95983 291 aa4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 GNAI3P08754 354 aa4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 SOS1Q07889 1333 aaPredicted RBP4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 HS1BP3Q53T59 392 aa4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 NME9Q86XW9 330 aa4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 PLEKHM2Q8IWE5 1019 aa4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 GAS2L2Q8NHY3 880 aa4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 PHACTR3Q96KR7 559 aa4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 SENP3Q9H4L4 574 aaPredicted RBP4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 RRAGDQ9NQL2 400 aaPredicted RBP4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 FOXD4L1Q9NU39 408 aa4.08□□□□□ -1.76
HMGN1P18-201ENST00000457642 SSH2Q76I76 1423 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 RTL1A6NKG5 1358 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 MSH6P52701 1360 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 TTC21AQ8NDW8 1320 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 RRP9O43818 475 aaKnown RBP4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 GNAI2P04899 355 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 PRKCSHP14314 528 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 SSFA2P28290 1259 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 CSPP1Q1MSJ5 1256 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 FBXO31Q5XUX0 539 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 MCTP1Q6DN14 999 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 SULT6B1Q6IMI4 303 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 CEP85Q6P2H3 762 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 WAPLQ7Z5K2 1190 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 ZSCAN30Q86W11 494 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 TSPYL6Q8N831 410 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 C8orf58Q8NAV2 365 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 THUMPD2Q9BTF0 503 aaKnown RBP4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 USP26Q9BXU7 913 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 PANK2Q9BZ23 570 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 SRCIN1Q9C0H9 1055 aa4.07□□□□□ -1.76
HMGN1P18-201ENST00000457642 DIP2BQ9P265 1576 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 ATP10DQ9P241 1426 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 FLT4P35916 1363 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 TNRQ92752 1358 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 AOX1Q06278 1338 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 APBB1O00213 710 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 CHL1O00533 1208 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 EPB41L2O43491 1005 aaKnown RBP4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 HTATSF1O43719 755 aaKnown RBP4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 GSPT1P15170 499 aaKnown RBP4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 MCM5P33992 734 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 ZNF445P59923 1031 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 ANAPC15P60006 121 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 EIF4A2Q14240 407 aaKnown RBP4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 HSP90AA2PQ14568 343 aaPredicted RBP4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 RRS1Q15050 365 aaKnown RBP4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 CCDC30Q5VVM6 783 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 CAVIN1Q6NZI2 390 aaKnown RBP4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 TXNDC2Q86VQ3 553 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 SIRT2Q8IXJ6 389 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 UBE2Q2Q8WVN8 375 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 PPP1R9BQ96SB3 815 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 KIF2CQ99661 725 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 LRRCC1Q9C099 1032 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 OSBPL3Q9H4L5 887 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 CCDC39Q9UFE4 941 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 TSPYL4Q9UJ04 414 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 HDAC5Q9UQL6 1122 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 NALCNQ8IZF0 1738 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 FMN2Q9NZ56 1722 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 TOPAZ1Q8N9V7 1692 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 NRXN3Q9Y4C0 1643 aa4.06□□□□□ -1.76
HMGN1P18-201ENST00000457642 PXDNLA1KZ92 1463 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 OVOS2A0A0J9YW53 1432 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 OVOS2Q6IE36 1432 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 SBNO1A3KN83 1393 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 PLEKHG3A1L390 1219 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 FAM83GA6ND36 823 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 TRIM6-TRIM34B2RNG4 842 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 SLC4A2P04920 1241 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 PTMAP06454 111 aaKnown RBP4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 SDSP20132 328 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 MX1P20591 662 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 TERF1P54274 439 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 FAM69CQ0P6D2 419 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 ZSCAN23Q3MJ62 389 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 HSP90AB4PQ58FF6 505 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 PLPPR3Q6T4P5 718 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 SLC4A10Q6U841 1118 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 KLHL34Q8N239 644 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 INTS4Q96HW7 963 aaKnown RBP4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 MAP7D2Q96T17 732 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 RBM42Q9BTD8 480 aaKnown RBP4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 BABAM1Q9NWV8 329 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 ATP6V1DQ9Y5K8 247 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 EID1Q9Y6B2 187 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 CACNA1FO60840 1977 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 TSPOAP1O95153 1857 aa4.05□□□□□ -1.76
HMGN1P18-201ENST00000457642 RGS12O14924 1447 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 USP6P35125 1406 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 METP08581 1390 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 USP31Q70CQ4 1352 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 TMEM2Q9UHN6 1383 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 PLEKHG1Q9ULL1 1385 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 ACEP12821 1306 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 WDR33Q9C0J8 1336 aaKnown RBP4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 SMARCA5O60264 1052 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms