RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 IFFO1Q0D2I5 559 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 SLMAPQ14BN4 828 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 APLFQ8IW19 511 aaPredicted RBP2.6□□□□□ -1.99
USP53-202ENST00000450251 ITPRIPQ8IWB1 547 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 FAM114A1Q8IWE2 563 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 GCC1Q96CN9 775 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 KCNH8Q96L42 1107 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 NCAPGQ9BPX3 1015 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 NUCKS1Q9H1E3 243 aaKnown RBP2.6□□□□□ -1.99
USP53-202ENST00000450251 TOP2BQ02880 1626 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 EHBP1L1Q8N3D4 1523 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 UGGT2Q9NYU1 1516 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 CTTNBP2Q8WZ74 1663 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 SLU7O95391 586 aaKnown RBP2.59□□□□□ -1.99
USP53-202ENST00000450251 SLC8A1P32418 973 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 SF3B2Q13435 895 aaKnown RBP2.59□□□□□ -1.99
USP53-202ENST00000450251 ENOX2Q16206 610 aaKnown RBP2.59□□□□□ -1.99
USP53-202ENST00000450251 NBPF8Q3BBV2 869 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 CCDC83Q8IWF9 413 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 TRIM5Q9C035 493 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 SUPT6HQ7KZ85 1726 aaKnown RBP2.59□□□□□ -1.99
USP53-202ENST00000450251 ELP1O95163 1332 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 RAD50Q92878 1312 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 USP47Q96K76 1375 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 CTAGE5O15320 804 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 TNNT1P13805 278 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 MCTP2Q6DN12 878 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 CCDC73Q6ZRK6 1079 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 CCDC148Q8NFR7 591 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 TEX14Q8IWB6 1497 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 KIF3BO15066 747 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 ERLIN2O94905 339 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 HSPA4P34932 840 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 NLRP5P59047 1200 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 NBPF9Q3BBW0 867 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 WWC2Q6AWC2 1192 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 RNF214Q8ND24 703 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 TBC1D32Q96NH3 1257 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 SH3GL3Q99963 347 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 RSPH14Q9UHP6 348 aa2.59□□□□□ -1.99
USP53-202ENST00000450251 NKTRP30414 1462 aaKnown RBP2.59□□□□□ -2
USP53-202ENST00000450251 NEO1Q92859 1461 aa2.59□□□□□ -2
USP53-202ENST00000450251 BAG4O95429 457 aaKnown RBP2.59□□□□□ -2
USP53-202ENST00000450251 SRPK2P78362 688 aaKnown RBP2.59□□□□□ -2
USP53-202ENST00000450251 ZBTB17Q13105 803 aa2.59□□□□□ -2
USP53-202ENST00000450251 ZSCAN23Q3MJ62 389 aa2.59□□□□□ -2
USP53-202ENST00000450251 KRBA2Q6ZNG9 492 aa2.59□□□□□ -2
USP53-202ENST00000450251 WDR63Q8IWG1 891 aa2.59□□□□□ -2
USP53-202ENST00000450251 CCAR2Q8N163 923 aaKnown RBP2.59□□□□□ -2
USP53-202ENST00000450251 RUFY2Q8WXA3 655 aa2.59□□□□□ -2
USP53-202ENST00000450251 TAOK2Q9UL54 1235 aa2.59□□□□□ -2
USP53-202ENST00000450251 TRPC6Q9Y210 931 aa2.59□□□□□ -2
USP53-202ENST00000450251 SOGA1O94964 1423 aa2.59□□□□□ -2
USP53-202ENST00000450251 DIP2BQ9P265 1576 aa2.59□□□□□ -2
USP53-202ENST00000450251 RNF123Q5XPI4 1314 aa2.59□□□□□ -2
USP53-202ENST00000450251 AQRO60306 1485 aaKnown RBP eCLIP2.59□□□□□ -2
USP53-202ENST00000450251 ANKRD36BQ8N2N9 1353 aa2.59□□□□□ -2
USP53-202ENST00000450251 NCOA1Q15788 1441 aa2.59□□□□□ -2
USP53-202ENST00000450251 LMAN1P49257 510 aa2.59□□□□□ -2
USP53-202ENST00000450251 PSMD7P51665 324 aa2.59□□□□□ -2
USP53-202ENST00000450251 SMC5Q8IY18 1101 aa2.59□□□□□ -2
USP53-202ENST00000450251 RPUSD2Q8IZ73 545 aaKnown RBP2.59□□□□□ -2
USP53-202ENST00000450251 CRACR2AQ9BSW2 395 aa2.59□□□□□ -2
USP53-202ENST00000450251 POLR1AO95602 1720 aaPredicted RBP2.58□□□□□ -2
USP53-202ENST00000450251 EBAG9O00559 213 aa2.58□□□□□ -2
USP53-202ENST00000450251 OPA1O60313 960 aa2.58□□□□□ -2
USP53-202ENST00000450251 KIF5BP33176 963 aa2.58□□□□□ -2
USP53-202ENST00000450251 SEPT6Q14141 434 aa2.58□□□□□ -2
USP53-202ENST00000450251 SLFNL1Q499Z3 407 aa2.58□□□□□ -2
USP53-202ENST00000450251 OLFM4Q6UX06 510 aa2.58□□□□□ -2
USP53-202ENST00000450251 SPC24Q8NBT2 197 aa2.58□□□□□ -2
USP53-202ENST00000450251 SMARCC1Q92922 1105 aaPredicted RBP2.58□□□□□ -2
USP53-202ENST00000450251 ARFGAP3Q9NP61 516 aa2.58□□□□□ -2
USP53-202ENST00000450251 ZNHIT6Q9NWK9 470 aaKnown RBP2.58□□□□□ -2
USP53-202ENST00000450251 CCDC141Q6ZP82 1450 aa2.58□□□□□ -2
USP53-202ENST00000450251 LRRC9Q6ZRR7 1453 aa2.58□□□□□ -2
USP53-202ENST00000450251 CFAP43Q8NDM7 1665 aa2.58□□□□□ -2
USP53-202ENST00000450251 HECW1Q76N89 1606 aa2.58□□□□□ -2
USP53-202ENST00000450251 CUL7Q14999 1698 aa2.58□□□□□ -2
USP53-202ENST00000450251 NBPF7P0C2Y1 421 aaPredicted RBP2.58□□□□□ -2
USP53-202ENST00000450251 RLBP1P12271 317 aa2.58□□□□□ -2
USP53-202ENST00000450251 NEDD9Q14511 834 aa2.58□□□□□ -2
USP53-202ENST00000450251 RAB3GAP1Q15042 981 aa2.58□□□□□ -2
USP53-202ENST00000450251 CCDC40Q4G0X9 1142 aa2.58□□□□□ -2
USP53-202ENST00000450251 SPECC1LQ69YQ0 1117 aa2.58□□□□□ -2
USP53-202ENST00000450251 CCDC102AQ96A19 550 aa2.58□□□□□ -2
USP53-202ENST00000450251 NSRP1Q9H0G5 558 aaKnown RBP2.58□□□□□ -2
USP53-202ENST00000450251 CLIP2Q9UDT6 1046 aa2.58□□□□□ -2
USP53-202ENST00000450251 SMC3Q9UQE7 1217 aa2.58□□□□□ -2
USP53-202ENST00000450251 SPDYE4A6NLX3 237 aa2.58□□□□□ -2
USP53-202ENST00000450251 VGLL3A8MV65 326 aa2.58□□□□□ -2
USP53-202ENST00000450251 BUB1BO60566 1050 aaPredicted RBP2.58□□□□□ -2
USP53-202ENST00000450251 GTF2E1P29083 439 aaPredicted RBP2.58□□□□□ -2
USP53-202ENST00000450251 WDR78Q5VTH9 848 aa2.58□□□□□ -2
USP53-202ENST00000450251 CCDC30Q5VVM6 783 aa2.58□□□□□ -2
USP53-202ENST00000450251 CCDC65Q8IXS2 484 aa2.58□□□□□ -2
USP53-202ENST00000450251 LMNTD2Q8IXW0 634 aa2.58□□□□□ -2
USP53-202ENST00000450251 TNPO1Q92973 898 aaKnown RBP2.58□□□□□ -2
USP53-202ENST00000450251 SECISBP2LQ93073 1101 aaKnown RBP2.58□□□□□ -2
USP53-202ENST00000450251 AGLP35573 1532 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms