RNA–Protein interactions for RNA: ENST00000446501.6

BRF1-206, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-206ENST00000446501 MAP3K19Q56UN5 1328 aa20.26■□□□□ 0.83
BRF1-206ENST00000446501 FOXD4L1Q9NU39 408 aa20.26■□□□□ 0.83
BRF1-206ENST00000446501 KNDC1Q76NI1 1749 aa20.25■□□□□ 0.83
BRF1-206ENST00000446501 OVOS2A0A0J9YW53 1432 aa20.24■□□□□ 0.83
BRF1-206ENST00000446501 OVOS2Q6IE36 1432 aa20.24■□□□□ 0.83
BRF1-206ENST00000446501 ITSN1Q15811 1721 aa20.24■□□□□ 0.83
BRF1-206ENST00000446501 KIAA1211Q6ZU35 1233 aa20.24■□□□□ 0.83
BRF1-206ENST00000446501 ARHGAP45Q92619 1136 aa20.24■□□□□ 0.83
BRF1-206ENST00000446501 ABCC4O15439 1325 aa20.23■□□□□ 0.83
BRF1-206ENST00000446501 AKAP12Q02952 1782 aa20.23■□□□□ 0.83
BRF1-206ENST00000446501 RBM10P98175 930 aaKnown RBP20.23■□□□□ 0.83
BRF1-206ENST00000446501 DLG5Q8TDM6 1919 aa20.23■□□□□ 0.83
BRF1-206ENST00000446501 PTCH1Q13635 1447 aa20.22■□□□□ 0.83
BRF1-206ENST00000446501 MTHFSDQ2M296 383 aaKnown RBP20.21■□□□□ 0.83
BRF1-206ENST00000446501 KCNA6P17658 529 aa20.21■□□□□ 0.83
BRF1-206ENST00000446501 TNPO1Q92973 898 aaKnown RBP20.21■□□□□ 0.83
BRF1-206ENST00000446501 AMPHP49418 695 aa20.2■□□□□ 0.83
BRF1-206ENST00000446501 CHL1O00533 1208 aa20.2■□□□□ 0.82
BRF1-206ENST00000446501 LTV1Q96GA3 475 aaPredicted RBP20.2■□□□□ 0.82
BRF1-206ENST00000446501 TPM2P07951 284 aa20.2■□□□□ 0.82
BRF1-206ENST00000446501 NLRP6P59044 892 aa20.2■□□□□ 0.82
BRF1-206ENST00000446501 PLEKHG5O94827 1062 aa20.19■□□□□ 0.82
BRF1-206ENST00000446501 API5Q9BZZ5 524 aaKnown RBP20.19■□□□□ 0.82
BRF1-206ENST00000446501 TBX22Q9Y458 520 aa20.19■□□□□ 0.82
BRF1-206ENST00000446501 PEAK1Q9H792 1746 aa20.19■□□□□ 0.82
BRF1-206ENST00000446501 APBB1O00213 710 aa20.19■□□□□ 0.82
BRF1-206ENST00000446501 PIK3R4Q99570 1358 aa20.18■□□□□ 0.82
BRF1-206ENST00000446501 HSP90AB1P08238 724 aaKnown RBP20.18■□□□□ 0.82
BRF1-206ENST00000446501 C14orf37Q86TY3 774 aa20.18■□□□□ 0.82
BRF1-206ENST00000446501 EYA1Q99502 592 aa20.18■□□□□ 0.82
BRF1-206ENST00000446501 ARID3AQ99856 593 aa20.18■□□□□ 0.82
BRF1-206ENST00000446501 PDCL3Q9H2J4 239 aa20.18■□□□□ 0.82
BRF1-206ENST00000446501 THEMISQ8N1K5 641 aaPredicted RBP20.17■□□□□ 0.82
BRF1-206ENST00000446501 TRHP20396 242 aaPredicted RBP20.17■□□□□ 0.82
BRF1-206ENST00000446501 SSH2Q76I76 1423 aa20.17■□□□□ 0.82
BRF1-206ENST00000446501 USP31Q70CQ4 1352 aa20.16■□□□□ 0.82
BRF1-206ENST00000446501 SLC4A2P04920 1241 aa20.16■□□□□ 0.82
BRF1-206ENST00000446501 NECTIN2Q92692 538 aa20.16■□□□□ 0.82
BRF1-206ENST00000446501 C16orf71Q8IYS4 520 aaPredicted RBP20.15■□□□□ 0.82
BRF1-206ENST00000446501 GCC1Q96CN9 775 aa20.15■□□□□ 0.82
BRF1-206ENST00000446501 GBP4Q96PP9 640 aa20.15■□□□□ 0.82
BRF1-206ENST00000446501 NRKQ7Z2Y5 1582 aa20.15■□□□□ 0.82
BRF1-206ENST00000446501 F6X3S4 739 aa20.15■□□□□ 0.82
BRF1-206ENST00000446501 TSPYL4Q9UJ04 414 aa20.15■□□□□ 0.82
BRF1-206ENST00000446501 G2E3Q7L622 706 aa20.14■□□□□ 0.82
BRF1-206ENST00000446501 RTF1Q92541 710 aaKnown RBP20.14■□□□□ 0.82
BRF1-206ENST00000446501 ISY1Q9ULR0 285 aaKnown RBP20.14■□□□□ 0.82
BRF1-206ENST00000446501 SLC4A10Q6U841 1118 aa20.14■□□□□ 0.81
BRF1-206ENST00000446501 MEIS3Q99687 375 aa20.13■□□□□ 0.81
BRF1-206ENST00000446501 USHBP1Q8N6Y0 703 aa20.13■□□□□ 0.81
BRF1-206ENST00000446501 FAM13BQ9NYF5 915 aa20.13■□□□□ 0.81
BRF1-206ENST00000446501 NASPP49321 788 aaPredicted RBP20.12■□□□□ 0.81
BRF1-206ENST00000446501 ABTB2Q8N961 1025 aa20.12■□□□□ 0.81
BRF1-206ENST00000446501 OTUD7AQ8TE49 926 aaPredicted RBP20.12■□□□□ 0.81
BRF1-206ENST00000446501 ANP32BQ92688 251 aaKnown RBP20.12■□□□□ 0.81
BRF1-206ENST00000446501 RIMS1Q86UR5 1692 aaKnown RBP20.12■□□□□ 0.81
BRF1-206ENST00000446501 TOPAZ1Q8N9V7 1692 aa20.12■□□□□ 0.81
BRF1-206ENST00000446501 TTC21AQ8NDW8 1320 aa20.12■□□□□ 0.81
BRF1-206ENST00000446501 MSNP26038 577 aaKnown RBP20.12■□□□□ 0.81
BRF1-206ENST00000446501 CHMP4BQ9H444 224 aaKnown RBP20.12■□□□□ 0.81
BRF1-206ENST00000446501 CRB1P82279 1406 aa20.11■□□□□ 0.81
BRF1-206ENST00000446501 FLT4P35916 1363 aa20.11■□□□□ 0.81
BRF1-206ENST00000446501 BMP2KLQ5H9B9 411 aa20.11■□□□□ 0.81
BRF1-206ENST00000446501 ZBTB7CA1YPR0 619 aa20.11■□□□□ 0.81
BRF1-206ENST00000446501 SMARCA5O60264 1052 aaPredicted RBP20.11■□□□□ 0.81
BRF1-206ENST00000446501 RGPD8O14715 1765 aaPredicted RBP20.11■□□□□ 0.81
BRF1-206ENST00000446501 MSH6P52701 1360 aa20.1■□□□□ 0.81
BRF1-206ENST00000446501 INTS3Q68E01 1043 aaKnown RBP20.1■□□□□ 0.81
BRF1-206ENST00000446501 TBC1D9Q6ZT07 1266 aa20.1■□□□□ 0.81
BRF1-206ENST00000446501 RGS12O14924 1447 aa20.1■□□□□ 0.81
BRF1-206ENST00000446501 SBNO1A3KN83 1393 aa20.1■□□□□ 0.81
BRF1-206ENST00000446501 CEP170BQ9Y4F5 1589 aaPredicted RBP20.1■□□□□ 0.81
BRF1-206ENST00000446501 DIP2AQ14689 1571 aa20.09■□□□□ 0.81
BRF1-206ENST00000446501 ARHGAP23Q9P227 1491 aa20.09■□□□□ 0.81
BRF1-206ENST00000446501 R3HCC1Q9Y3T6 440 aaKnown RBP20.09■□□□□ 0.81
BRF1-206ENST00000446501 ZSCAN30Q86W11 494 aa20.09■□□□□ 0.81
BRF1-206ENST00000446501 SLIT1O75093 1534 aa20.08■□□□□ 0.81
BRF1-206ENST00000446501 GSPT1P15170 499 aaKnown RBP20.08■□□□□ 0.81
BRF1-206ENST00000446501 CCDC173Q0VFZ6 552 aa20.08■□□□□ 0.81
BRF1-206ENST00000446501 NCLP19338 710 aaKnown RBP20.08■□□□□ 0.8
BRF1-206ENST00000446501 ARHGEF10O15013 1369 aa20.07■□□□□ 0.8
BRF1-206ENST00000446501 HOXC9P31274 260 aa20.07■□□□□ 0.8
BRF1-206ENST00000446501 SKOR2Q2VWA4 1001 aaPredicted RBP20.07■□□□□ 0.8
BRF1-206ENST00000446501 RBM42Q9BTD8 480 aaKnown RBP20.07■□□□□ 0.8
BRF1-206ENST00000446501 DDIT3P35638 169 aa20.07■□□□□ 0.8
BRF1-206ENST00000446501 CEP85Q6P2H3 762 aa20.07■□□□□ 0.8
BRF1-206ENST00000446501 IGSF1Q8N6C5 1336 aa20.07■□□□□ 0.8
BRF1-206ENST00000446501 RAB3GAP1Q15042 981 aa20.06■□□□□ 0.8
BRF1-206ENST00000446501 PLEKHM2Q8IWE5 1019 aa20.06■□□□□ 0.8
BRF1-206ENST00000446501 DCTPP1Q9H773 170 aa20.06■□□□□ 0.8
BRF1-206ENST00000446501 DDX49Q9Y6V7 483 aaKnown RBP20.06■□□□□ 0.8
BRF1-206ENST00000446501 SSFA2P28290 1259 aa20.06■□□□□ 0.8
BRF1-206ENST00000446501 CD2BP2O95400 341 aaKnown RBP20.05■□□□□ 0.8
BRF1-206ENST00000446501 ANKRD44Q8N8A2 993 aa20.05■□□□□ 0.8
BRF1-206ENST00000446501 KIAA0232Q92628 1395 aa20.05■□□□□ 0.8
BRF1-206ENST00000446501 OFD1O75665 1012 aa20.05■□□□□ 0.8
BRF1-206ENST00000446501 ATP10DQ9P241 1426 aa20.04■□□□□ 0.8
BRF1-206ENST00000446501 RBM25P49756 843 aaKnown RBP20.04■□□□□ 0.8
BRF1-206ENST00000446501 PODXL2Q9NZ53 605 aa20.04■□□□□ 0.8
BRF1-206ENST00000446501 RTL1A6NKG5 1358 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms