RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 KIF2CQ99661 725 aa15.54■□□□□ 0.08
PPP4R1-202ENST00000400555 EID1Q9Y6B2 187 aa15.54■□□□□ 0.08
PPP4R1-202ENST00000400555 BAG4O95429 457 aaKnown RBP15.53■□□□□ 0.08
PPP4R1-202ENST00000400555 REC8O95072 547 aa15.53■□□□□ 0.08
PPP4R1-202ENST00000400555 NASPP49321 788 aaPredicted RBP15.53■□□□□ 0.08
PPP4R1-202ENST00000400555 RPAP2Q8IXW5 612 aaPredicted RBP15.53■□□□□ 0.08
PPP4R1-202ENST00000400555 DDX54Q8TDD1 881 aaKnown RBP15.53■□□□□ 0.08
PPP4R1-202ENST00000400555 SNX21Q969T3 373 aa15.53■□□□□ 0.08
PPP4R1-202ENST00000400555 MSH6P52701 1360 aa15.53■□□□□ 0.08
PPP4R1-202ENST00000400555 ABTB2Q8N961 1025 aa15.52■□□□□ 0.08
PPP4R1-202ENST00000400555 ABCC4O15439 1325 aa15.52■□□□□ 0.08
PPP4R1-202ENST00000400555 NEXMIFQ5QGS0 1516 aa15.52■□□□□ 0.08
PPP4R1-202ENST00000400555 RAB3GAP1Q15042 981 aa15.52■□□□□ 0.08
PPP4R1-202ENST00000400555 XPCQ01831 940 aaPredicted RBP15.52■□□□□ 0.07
PPP4R1-202ENST00000400555 GNAI2P04899 355 aa15.51■□□□□ 0.07
PPP4R1-202ENST00000400555 ZNF853P0CG23 659 aa15.51■□□□□ 0.07
PPP4R1-202ENST00000400555 GDPD2Q9HCC8 539 aa15.51■□□□□ 0.07
PPP4R1-202ENST00000400555 LMTK2Q8IWU2 1503 aa15.51■□□□□ 0.07
PPP4R1-202ENST00000400555 PTPRMP28827 1452 aa15.51■□□□□ 0.07
PPP4R1-202ENST00000400555 SURF6O75683 361 aaKnown RBP15.51■□□□□ 0.07
PPP4R1-202ENST00000400555 SKOR2Q2VWA4 1001 aaPredicted RBP15.51■□□□□ 0.07
PPP4R1-202ENST00000400555 AMOTL2Q9Y2J4 779 aa15.51■□□□□ 0.07
PPP4R1-202ENST00000400555 LRRFIP2Q9Y608 721 aaKnown RBP15.51■□□□□ 0.07
PPP4R1-202ENST00000400555 LRRC7Q96NW7 1537 aa15.51■□□□□ 0.07
PPP4R1-202ENST00000400555 ERC2O15083 957 aa15.5■□□□□ 0.07
PPP4R1-202ENST00000400555 MAP3K19Q56UN5 1328 aa15.5■□□□□ 0.07
PPP4R1-202ENST00000400555 ESPNB1AK53 854 aa15.5■□□□□ 0.07
PPP4R1-202ENST00000400555 PTMAP06454 111 aaKnown RBP15.5■□□□□ 0.07
PPP4R1-202ENST00000400555 USP26Q9BXU7 913 aa15.5■□□□□ 0.07
PPP4R1-202ENST00000400555 ZFYVE9O95405 1425 aa15.5■□□□□ 0.07
PPP4R1-202ENST00000400555 FAM135BQ49AJ0 1406 aa15.5■□□□□ 0.07
PPP4R1-202ENST00000400555 PNPLA6Q8IY17 1366 aa15.5■□□□□ 0.07
PPP4R1-202ENST00000400555 CD163L1Q9NR16 1453 aa15.5■□□□□ 0.07
PPP4R1-202ENST00000400555 CIZ1Q9ULV3 898 aaPredicted RBP15.49■□□□□ 0.07
PPP4R1-202ENST00000400555 CCDC9Q9Y3X0 531 aaKnown RBP15.49■□□□□ 0.07
PPP4R1-202ENST00000400555 CHL1O00533 1208 aa15.49■□□□□ 0.07
PPP4R1-202ENST00000400555 EYA1Q99502 592 aa15.49■□□□□ 0.07
PPP4R1-202ENST00000400555 PPLO60437 1756 aa15.49■□□□□ 0.07
PPP4R1-202ENST00000400555 MCCP23508 829 aa15.49■□□□□ 0.07
PPP4R1-202ENST00000400555 NCBP3Q53F19 620 aaKnown RBP15.49■□□□□ 0.07
PPP4R1-202ENST00000400555 MSNP26038 577 aaKnown RBP15.48■□□□□ 0.07
PPP4R1-202ENST00000400555 LTKP29376 864 aa15.48■□□□□ 0.07
PPP4R1-202ENST00000400555 HDGFL1Q5TGJ6 251 aa15.48■□□□□ 0.07
PPP4R1-202ENST00000400555 UBTFL1P0CB47 393 aaPredicted RBP15.48■□□□□ 0.07
PPP4R1-202ENST00000400555 FLIIQ13045 1269 aa15.48■□□□□ 0.07
PPP4R1-202ENST00000400555 LRRCC1Q9C099 1032 aa15.48■□□□□ 0.07
PPP4R1-202ENST00000400555 PDE1AP54750 535 aa15.48■□□□□ 0.07
PPP4R1-202ENST00000400555 NUCB2P80303 420 aa15.48■□□□□ 0.07
PPP4R1-202ENST00000400555 PNMA6EA0A0J9YXQ4 647 aa15.47■□□□□ 0.07
PPP4R1-202ENST00000400555 KCNJ4P48050 445 aa15.47■□□□□ 0.07
PPP4R1-202ENST00000400555 EDC4Q6P2E9 1401 aaKnown RBP15.46■□□□□ 0.07
PPP4R1-202ENST00000400555 TAOK2Q9UL54 1235 aa15.46■□□□□ 0.07
PPP4R1-202ENST00000400555 PIK3C2BO00750 1634 aa15.46■□□□□ 0.07
PPP4R1-202ENST00000400555 FSD2A1L4K1 749 aa15.46■□□□□ 0.07
PPP4R1-202ENST00000400555 AIMP1Q12904 312 aaKnown RBP15.46■□□□□ 0.07
PPP4R1-202ENST00000400555 CHMP3Q9Y3E7 222 aa15.46■□□□□ 0.07
PPP4R1-202ENST00000400555 ZMYM3Q14202 1370 aa15.46■□□□□ 0.07
PPP4R1-202ENST00000400555 CCDC30Q5VVM6 783 aa15.46■□□□□ 0.07
PPP4R1-202ENST00000400555 PHAXQ9H814 394 aaKnown RBP15.46■□□□□ 0.07
PPP4R1-202ENST00000400555 SYCE3A1L190 88 aa15.45■□□□□ 0.06
PPP4R1-202ENST00000400555 COL3A1P02461 1466 aaPredicted RBP15.45■□□□□ 0.06
PPP4R1-202ENST00000400555 CCT4P50991 539 aaKnown RBP15.45■□□□□ 0.06
PPP4R1-202ENST00000400555 ALKQ9UM73 1620 aa15.45■□□□□ 0.06
PPP4R1-202ENST00000400555 ZC3H13Q5T200 1668 aaKnown RBP15.45■□□□□ 0.06
PPP4R1-202ENST00000400555 MX1P20591 662 aa15.45■□□□□ 0.06
PPP4R1-202ENST00000400555 NEO1Q92859 1461 aa15.45■□□□□ 0.06
PPP4R1-202ENST00000400555 ARHGEF40Q8TER5 1519 aa15.44■□□□□ 0.06
PPP4R1-202ENST00000400555 KIAA1211Q6ZU35 1233 aa15.44■□□□□ 0.06
PPP4R1-202ENST00000400555 SIGLEC1Q9BZZ2 1709 aa15.44■□□□□ 0.06
PPP4R1-202ENST00000400555 ARHGEF28Q8N1W1 1705 aaKnown RBP15.44■□□□□ 0.06
PPP4R1-202ENST00000400555 ROBO2Q9HCK4 1378 aa15.44■□□□□ 0.06
PPP4R1-202ENST00000400555 SRGAP3O43295 1099 aa15.43■□□□□ 0.06
PPP4R1-202ENST00000400555 PRKCSHP14314 528 aaPredicted RBP15.43■□□□□ 0.06
PPP4R1-202ENST00000400555 TSPOAP1O95153 1857 aa15.43■□□□□ 0.06
PPP4R1-202ENST00000400555 GNAT3A8MTJ3 354 aa15.43■□□□□ 0.06
PPP4R1-202ENST00000400555 TEFQ10587 303 aa15.43■□□□□ 0.06
PPP4R1-202ENST00000400555 RTL1A6NKG5 1358 aa15.43■□□□□ 0.06
PPP4R1-202ENST00000400555 GNAI3P08754 354 aa15.43■□□□□ 0.06
PPP4R1-202ENST00000400555 PALD1Q9ULE6 856 aa15.43■□□□□ 0.06
PPP4R1-202ENST00000400555 CWC27Q6UX04 472 aaKnown RBP15.43■□□□□ 0.06
PPP4R1-202ENST00000400555 TMX3Q96JJ7 454 aa15.42■□□□□ 0.06
PPP4R1-202ENST00000400555 MYO3AQ8NEV4 1616 aa15.42■□□□□ 0.06
PPP4R1-202ENST00000400555 DIP2CQ9Y2E4 1556 aa15.42■□□□□ 0.06
PPP4R1-202ENST00000400555 MPRIPQ6WCQ1 1025 aa15.42■□□□□ 0.06
PPP4R1-202ENST00000400555 UNC5CLQ8IV45 518 aa15.42■□□□□ 0.06
PPP4R1-202ENST00000400555 SPG7Q9UQ90 795 aa15.42■□□□□ 0.06
PPP4R1-202ENST00000400555 PTPRCP08575 1304 aa15.41■□□□□ 0.06
PPP4R1-202ENST00000400555 BRPF1P55201 1214 aaPredicted RBP15.41■□□□□ 0.06
PPP4R1-202ENST00000400555 TAF7Q15545 349 aaPredicted RBP15.41■□□□□ 0.06
PPP4R1-202ENST00000400555 DNTTIP2Q5QJE6 756 aaKnown RBP15.41■□□□□ 0.06
PPP4R1-202ENST00000400555 ARHGAP31Q2M1Z3 1444 aa15.41■□□□□ 0.06
PPP4R1-202ENST00000400555 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.41■□□□□ 0.06
PPP4R1-202ENST00000400555 CPA1P15085 419 aa15.41■□□□□ 0.06
PPP4R1-202ENST00000400555 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
PPP4R1-202ENST00000400555 PRIM1P49642 420 aaKnown RBP15.41■□□□□ 0.06
PPP4R1-202ENST00000400555 IFT172Q9UG01 1749 aa15.41■□□□□ 0.06
PPP4R1-202ENST00000400555 ERBB4Q15303 1308 aa15.41■□□□□ 0.06
PPP4R1-202ENST00000400555 C9orf78Q9NZ63 289 aaPredicted RBP15.41■□□□□ 0.06
PPP4R1-202ENST00000400555 CPS1P31327 1500 aa15.4■□□□□ 0.06
PPP4R1-202ENST00000400555 ZSCAN23Q3MJ62 389 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms