RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 GOLGA6L4A6NEF3 574 aa16.15■□□□□ 0.18
NFKB1-202ENST00000394820 PTPRMP28827 1452 aa16.15■□□□□ 0.18
NFKB1-202ENST00000394820 PRR36Q9H6K5 1346 aa16.15■□□□□ 0.18
NFKB1-202ENST00000394820 ZGPATQ8N5A5 531 aaKnown RBP16.15■□□□□ 0.18
NFKB1-202ENST00000394820 ARHGAP31Q2M1Z3 1444 aa16.15■□□□□ 0.18
NFKB1-202ENST00000394820 F6X3S4 739 aa16.15■□□□□ 0.18
NFKB1-202ENST00000394820 MCCP23508 829 aa16.15■□□□□ 0.18
NFKB1-202ENST00000394820 OTUD7AQ8TE49 926 aaPredicted RBP16.15■□□□□ 0.18
NFKB1-202ENST00000394820 EIF2S2P20042 333 aaKnown RBP16.14■□□□□ 0.17
NFKB1-202ENST00000394820 FOSBP53539 338 aa16.14■□□□□ 0.17
NFKB1-202ENST00000394820 USHBP1Q8N6Y0 703 aa16.14■□□□□ 0.17
NFKB1-202ENST00000394820 SPC24Q8NBT2 197 aa16.14■□□□□ 0.17
NFKB1-202ENST00000394820 TSPYL4Q9UJ04 414 aa16.14■□□□□ 0.17
NFKB1-202ENST00000394820 UQCRHLA0A096LP55 91 aa16.14■□□□□ 0.17
NFKB1-202ENST00000394820 BAG4O95429 457 aaKnown RBP16.14■□□□□ 0.17
NFKB1-202ENST00000394820 SLC4A2P04920 1241 aa16.14■□□□□ 0.17
NFKB1-202ENST00000394820 UQCRHP07919 91 aa16.14■□□□□ 0.17
NFKB1-202ENST00000394820 MRPL50Q8N5N7 158 aaKnown RBP16.14■□□□□ 0.17
NFKB1-202ENST00000394820 TNRQ92752 1358 aa16.13■□□□□ 0.17
NFKB1-202ENST00000394820 FGD1P98174 961 aa16.13■□□□□ 0.17
NFKB1-202ENST00000394820 PKP1Q13835 747 aa16.13■□□□□ 0.17
NFKB1-202ENST00000394820 ZNF692Q9BU19 519 aaPredicted RBP16.13■□□□□ 0.17
NFKB1-202ENST00000394820 TTC21BQ7Z4L5 1316 aa16.13■□□□□ 0.17
NFKB1-202ENST00000394820 IL1RAPL2Q9NP60 686 aa16.13■□□□□ 0.17
NFKB1-202ENST00000394820 ANTXR1Q9H6X2 564 aa16.13■□□□□ 0.17
NFKB1-202ENST00000394820 ALKQ9UM73 1620 aa16.12■□□□□ 0.17
NFKB1-202ENST00000394820 FIBPO43427 364 aa16.12■□□□□ 0.17
NFKB1-202ENST00000394820 AAMPQ13685 434 aa16.12■□□□□ 0.17
NFKB1-202ENST00000394820 INTS3Q68E01 1043 aaKnown RBP16.12■□□□□ 0.17
NFKB1-202ENST00000394820 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
NFKB1-202ENST00000394820 FKBP5Q13451 457 aaPredicted RBP16.12■□□□□ 0.17
NFKB1-202ENST00000394820 CFAP44Q96MT7 982 aa16.12■□□□□ 0.17
NFKB1-202ENST00000394820 IL16Q14005 1332 aa16.11■□□□□ 0.17
NFKB1-202ENST00000394820 VPS37CA5D8V6 355 aaPredicted RBP16.11■□□□□ 0.17
NFKB1-202ENST00000394820 NUCB2P80303 420 aa16.11■□□□□ 0.17
NFKB1-202ENST00000394820 ALDH1L2Q3SY69 923 aa16.11■□□□□ 0.17
NFKB1-202ENST00000394820 ZSCAN30Q86W11 494 aa16.11■□□□□ 0.17
NFKB1-202ENST00000394820 TSC1Q92574 1164 aa16.11■□□□□ 0.17
NFKB1-202ENST00000394820 ZNF592Q92610 1267 aa16.11■□□□□ 0.17
NFKB1-202ENST00000394820 CCDC173Q0VFZ6 552 aa16.11■□□□□ 0.17
NFKB1-202ENST00000394820 API5Q9BZZ5 524 aaKnown RBP16.11■□□□□ 0.17
NFKB1-202ENST00000394820 RRP9O43818 475 aaKnown RBP16.1■□□□□ 0.17
NFKB1-202ENST00000394820 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.1■□□□□ 0.17
NFKB1-202ENST00000394820 ABTB2Q8N961 1025 aa16.1■□□□□ 0.17
NFKB1-202ENST00000394820 A2ML1A8K2U0 1454 aa16.1■□□□□ 0.17
NFKB1-202ENST00000394820 IQSEC2Q5JU85 1478 aa16.1■□□□□ 0.17
NFKB1-202ENST00000394820 MYO5BQ9ULV0 1848 aa16.1■□□□□ 0.17
NFKB1-202ENST00000394820 ZHX1Q9UKY1 873 aaPredicted RBP16.1■□□□□ 0.17
NFKB1-202ENST00000394820 PRIM1P49642 420 aaKnown RBP16.1■□□□□ 0.17
NFKB1-202ENST00000394820 HDAC1Q13547 482 aaPredicted RBP16.1■□□□□ 0.17
NFKB1-202ENST00000394820 STK31Q9BXU1 1019 aa16.1■□□□□ 0.17
NFKB1-202ENST00000394820 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
NFKB1-202ENST00000394820 IFT172Q9UG01 1749 aa16.09■□□□□ 0.17
NFKB1-202ENST00000394820 ROBO2Q9HCK4 1378 aa16.09■□□□□ 0.17
NFKB1-202ENST00000394820 ZBTB7BO15156 539 aaPredicted RBP16.09■□□□□ 0.17
NFKB1-202ENST00000394820 REC8O95072 547 aa16.09■□□□□ 0.17
NFKB1-202ENST00000394820 ZC3H13Q5T200 1668 aaKnown RBP16.08■□□□□ 0.17
NFKB1-202ENST00000394820 ARHGEF28Q8N1W1 1705 aaKnown RBP16.08■□□□□ 0.16
NFKB1-202ENST00000394820 IGSF3O75054 1194 aa16.08■□□□□ 0.16
NFKB1-202ENST00000394820 CD163L1Q9NR16 1453 aa16.08■□□□□ 0.16
NFKB1-202ENST00000394820 ZFYVE9O95405 1425 aa16.08■□□□□ 0.16
NFKB1-202ENST00000394820 HMMRO75330 724 aa16.08■□□□□ 0.16
NFKB1-202ENST00000394820 SMC5Q8IY18 1101 aa16.08■□□□□ 0.16
NFKB1-202ENST00000394820 NPHP1O15259 732 aa16.07■□□□□ 0.16
NFKB1-202ENST00000394820 PPP6R1Q9UPN7 881 aa16.07■□□□□ 0.16
NFKB1-202ENST00000394820 NUCB1Q02818 461 aa16.07■□□□□ 0.16
NFKB1-202ENST00000394820 MAPK8IP2Q13387 824 aaPredicted RBP16.07■□□□□ 0.16
NFKB1-202ENST00000394820 PTMSP20962 102 aa16.07■□□□□ 0.16
NFKB1-202ENST00000394820 CHAF1AQ13111 956 aaPredicted RBP16.07■□□□□ 0.16
NFKB1-202ENST00000394820 ARHGEF40Q8TER5 1519 aa16.06■□□□□ 0.16
NFKB1-202ENST00000394820 RABEP1Q15276 862 aa16.06■□□□□ 0.16
NFKB1-202ENST00000394820 C17orf53Q8N3J3 647 aaPredicted RBP16.06■□□□□ 0.16
NFKB1-202ENST00000394820 SHPRHQ149N8 1683 aa16.06■□□□□ 0.16
NFKB1-202ENST00000394820 GCC1Q96CN9 775 aa16.06■□□□□ 0.16
NFKB1-202ENST00000394820 MEIS3Q99687 375 aa16.06■□□□□ 0.16
NFKB1-202ENST00000394820 MTHFSDQ2M296 383 aaKnown RBP16.05■□□□□ 0.16
NFKB1-202ENST00000394820 MYO3AQ8NEV4 1616 aa16.05■□□□□ 0.16
NFKB1-202ENST00000394820 MAP3K19Q56UN5 1328 aa16.05■□□□□ 0.16
NFKB1-202ENST00000394820 NEURL4Q96JN8 1562 aa16.05■□□□□ 0.16
NFKB1-202ENST00000394820 ZSCAN23Q3MJ62 389 aa16.05■□□□□ 0.16
NFKB1-202ENST00000394820 G2E3Q7L622 706 aa16.05■□□□□ 0.16
NFKB1-202ENST00000394820 SYAP1Q96A49 352 aaPredicted RBP16.05■□□□□ 0.16
NFKB1-202ENST00000394820 EDC4Q6P2E9 1401 aaKnown RBP16.05■□□□□ 0.16
NFKB1-202ENST00000394820 USP25Q9UHP3 1055 aa16.04■□□□□ 0.16
NFKB1-202ENST00000394820 PPFIA3O75145 1194 aa16.04■□□□□ 0.16
NFKB1-202ENST00000394820 TMEM131LA2VDJ0 1609 aa16.04■□□□□ 0.16
NFKB1-202ENST00000394820 CBX1P83916 185 aa16.04■□□□□ 0.16
NFKB1-202ENST00000394820 FERMT3Q86UX7 667 aa16.04■□□□□ 0.16
NFKB1-202ENST00000394820 PREX1Q8TCU6 1659 aa16.04■□□□□ 0.16
NFKB1-202ENST00000394820 RBSNQ9H1K0 784 aa16.03■□□□□ 0.16
NFKB1-202ENST00000394820 NUTM1Q86Y26 1132 aa16.03■□□□□ 0.16
NFKB1-202ENST00000394820 SIRT2Q8IXJ6 389 aa16.03■□□□□ 0.16
NFKB1-202ENST00000394820 KCNA6P17658 529 aa16.03■□□□□ 0.16
NFKB1-202ENST00000394820 BMP2KLQ5H9B9 411 aa16.03■□□□□ 0.16
NFKB1-202ENST00000394820 TMEM2Q9UHN6 1383 aa16.02■□□□□ 0.16
NFKB1-202ENST00000394820 ESCO1Q5FWF5 840 aa16.02■□□□□ 0.16
NFKB1-202ENST00000394820 CLTCQ00610 1675 aaKnown RBP16.02■□□□□ 0.16
NFKB1-202ENST00000394820 TPM2P07951 284 aa16.02■□□□□ 0.15
NFKB1-202ENST00000394820 PNPLA6Q8IY17 1366 aa16.02■□□□□ 0.15
NFKB1-202ENST00000394820 LRRC7Q96NW7 1537 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms